XLOC_039752 (mRNA) -

Overview
NameXLOC_039752
Unique NameXLOC_039752
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000163_pilon:714482..715779-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039752 ID=XLOC_039752|Name=XLOC_039752|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1298bp|location=Sequence derived from alignment at sc0000163_pilon:714482..715779- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAATGACAGTACCCAAAAAGCCCCTAATGACACAGACAGTAAGTCT GATTTTAAAAATAAGATGTTTACTCCATAGATATCTTTTTCTCTTAACCC CTAAAAAGCAAGAACACAACGCAGCTTGCTATTATTTTGTATGATATTTC AGAGTTCTTGTTATGGGAGAAAATCTTTCCAATTAAGTCAATTTTATTCA AGTTCAATGAACTCTTTTATCCTAAATTCTTCAACTATGTCATTTATCTC CTAACCTACAAATTATTTGTTGTAAAGGCCCAAGAACAGGAAGCTATTAT CTTGCCTACCTGACAATCTAAAAGTTCGCTTAACAATCAAACGCGCAAAA ATTGCAAAAATCTGGATAATGCTGCGGTACAGCCACTTTGGAATAAGTTA AAACCAAGCTGGTACATAATTTGGGAGAATTTTGCTGAACAATTTTAGTG AGCGGCCAGCTTGGTTCATATCTCAAAATATTTCGTAATTTGCATTTTCA GCAGAAATGTTTTCATTTGATTGTTGATTTAACTTTTGTTTCTATGGTAT ATCTTAAGGGAACTATTTTTTACTATTTTTGTGGTGCACTGATTTTGAGA TCTTTTGCAGATTTTTGGCTTGGGAAAAAACTAAGCCATTCTGTTGATTA TTTAGTCATTATTTTTAGCATTTGAAAAATTTTACAACAGCTCAAGATTA AATTGCGGTTTGGGGCCAAATCTGAACAAAAACGCAAAATTCAGTTCCCG CCTGTTCCCGAAAGAATTAGTTCCCTTAGTAAGGTAAGTTTATGTTAGTC AGGCTGCATCATTTAAGGTGTGCGATAGCACATGCACCCCTCCACACACA CCTAAAATCTCTGAGGGGTGTGGTCAATCACGCCATTAATCCAAATTTCA CTGCTAAAGTTGTACATAGCACTCCTTATCACACAACTAAATTCCAAAAA TTAAAGTTGGGAGTTTGATTGACTACACGCCTGTATTTTTCAAATGACAA AGCCCGGTTAGTTTATTAACTTGTTTTTTGGTTCCAGGTAAAGAGAAATC AATTTGGCAGAACGATTTGGGTGAGGAATTATACTGGATCCTCATTCAAT GTCTTTCCATCTTTCATCCCAAAGGTGATAAGGTTGAAACAGATGAGTCA ACCAGACCTCAAATGGAGAATTTCTACAGAAATAAAGAAAACAAAAGAAA TTTTCATATTTCTAAGAATACTAAAAAGTGGAAATATGAATTTTGTGTTG ATGATAATGATGTTGTTCAAAAGTTTGATGATGGCTTACCCAAGTTGA

Coding sequence (CDS) from alignment at sc0000163_pilon:714482..715779-

>XLOC_039752 ID=XLOC_039752|Name=XLOC_039752|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=606bp|location=Sequence derived from alignment at sc0000163_pilon:714482..715779- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAATGACAGTACCCAAAAAGCCCCTAATGACACAGACAATGGTAAT
GACAGTACCCAAAAAGCCCCTAATGACACAGACAGTAAAGAGAAATCAAT
TTGGCAGAACGATTTGGGTGAGGAATTATACTGGATCCTCATTCAATGTC
TTTCCATCTTTCATCCCAAAGGTGATAAGGTTGAAACAGATGAGTCAACC
AGACCTCAAATGGAGAATTTCTACAGAAATAAAGAAAACAAAAGAAATTT
TCATATTTCTAAGAATACTAAAAAGTGGAAATATGAATTTTGTGTTGATG
ATAATGATGTTGTTCAAAAGTTTGATGATGGCTTACCCAAGTTGAGTAAA
GAGAAATCAATTTGGCAGAACGATTTGGGTGAGGAATTATACTGGATCCT
CATTCAATGTCTTTCCATCTTTCATCCCAAAGGTGATAAGGTTGAAACAG
ATGAGTCAACCAGACCTCAAATGGAGAATTTCTACAGAAATAAAGAAAAC
AAAAGAAATTTTCATATTTCTAAGAATACTAAAAAGTGGAAATATGAATT
TTGTGTTGATGATAATGATGTTGTTCAAAAGTTTGATGATGGCTTACCCA
AGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039752XLOC_039752-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000163_pilongenomesc0000163_pilon:714482..715779 -
Properties
Property NameValue
Aaloc43-303:262
Aaloc1-42:1299