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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:1311434..1312985- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039749 ID=XLOC_039749|Name=XLOC_039749|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1552bp|location=Sequence derived from alignment at sc0000088_pilon:1311434..1312985- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGGTTCAATACGCGCTAAACTTTGGAGTCAGATTTATCGAAAGTTTCG
AAAGGGTGATCCTTGTAATGGAGAGACTAGTCACGATGAAGGAGATAGTG
ATGTTGAGCGACCTTTGGTATGTACTGAAAACAATTATGCATCTCAAACT
CATTATCTCAATTATTAGGGGGTTGGGTATACAGGGTGGGTTTCAAAATT
GTTCGTCGAAAAAATTTTTTTTTCTATTCGCTCTTTGAAAAAAGATCTCA
CAGGCTAATTAGGATACTTAAGATACCATTCCTGCCAAAAATATATCTTG
GGGCTCATAAATTTTGAAAATCGACTAACCACCCAATTAAACACCCACTG
ATAATAGCTTTTTTGCCCTTTTTGGCCAGCAGCCAAATTTAGTCGAAATC
AATACATTTAAGGCATCAACTTGTAATATTGGGCCATTTCACTTTGTATC
CATACAGGTGGGGGTAGACAAATAGTTCTAGAGGGTAATCTCCAGGGTTT
GTATATTTTCATATACGTCCCTGTGTGGTTTTTAAAAGGAACAGCCAATT
TTGATCAATGTTAATGTACTTTTCTTATCTAATCAGGTTAACGAAGATAC
TCCTGAATCGGACGAAGAAACTACCGAATGTGATAGCTTTGAGATGGAGA
TTTGCAACAGAATGGCTGATATTATTCGTTTGGAGCAACGACATGCTAAG
TTTCATAAACATTTGAGTAGACCATCAAAAATTGGAGCAGCTGCAATATG
TAGTGGTATTACTGGATTAGTAAACGAACAACTTTTTAGAGACATACAAC
TTCACATTATATCACCAAATAATCTGCGTGGCATATTCTTTCGTGAAAAT
AGGGACATTTTCACCATCAAAGCTGGAATGTTTGGTATTAAGCCAATCAT
TGTGAAAGGAATTTCTGACTCTTCAATTATTGAGCAGAAAAATCATTCTA
TAGTGTTGGCTCACGAATTTAGAATTCTCCAATTTCTTGGTCCCCATCGT
CACCTTATCGATTATTATGGCTTAGTCGAACTCAATGGGATTCCTCAGAT
AGTCTTGGATGATGATTTTAAATTTGCTGGTTTTGAGAGGTTCTACCAAG
AAAACCGTCGCTTTGATATCTACACCATTCAGGCATTGTTTAGAGACATA
ACATCTGTTGTTGAATTCCTCCATGTGAAGGGTGTTATTCACATGAATAT
AACAGAAGATTCTTTTGTGTTCAGTCTCGATGTTTCTGGTCCAGAGTGGA
GGTATTTCCCCATCCTTTGTGATTTCTCCTGTTGTTGTCTGGTCTCTGAT
GTGAAAGTACTGACGCCACAATTGCAGAGCAGATTTCGATCAACAAAACA
TCTTCCCGTAGAAGTGATGCGTGGAGAAAAATTGCCATCTTTCAATTGTG
ACATTTATGCTGTAGCTGTTTTGATGTCACATTTTTCAAACCGTTTGAAC
ACTCCTCAAGAACAACATATTTTTGATGAAGTTACTATCAAGCTTTTAAG
AAATACTACAGATATTTTTATTGATTCATTGTATGATTTCATTAAAAACT
AA Coding sequence (CDS) from alignment at sc0000088_pilon:1311434..1312985- >XLOC_039749 ID=XLOC_039749|Name=XLOC_039749|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2166bp|location=Sequence derived from alignment at sc0000088_pilon:1311434..1312985- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGGTTCAATACGCGCTAAACTTTGGAGTCAGATTTATCGAAAGTTTCG
AAAGGGTGATCCTTGTAATGGAGAGACTAGTCACGATGAAGGAGATAGTG
ATGTTGAGCGACCTTTGATTGGTTCAATACGCGCTAAACTTTGGAGTCAG
ATTTATCGAAAGTTTCGAAAGGGTGATCCTTGTAATGGAGAGACTAGTCA
CGATGAAGGAGATAGTGATGTTGAGCGACCTTTGGTTAACGAAGATACTC
CTGAATCGGACGAAGAAACTACCGAATGTGATAGCTTTGAGATGGAGATT
TGCAACAGAATGGCTGATATTATTCGTTTGGAGCAACGACATGCTAAGTT
TCATAAACATTTGAGTAGACCATCAAAAATTGGAGCAGCTGCAATATGTA
GTGGTATTACTGGATTAGTAAACGAACAACTTTTTAGAGACATACAACTT
CACATTATATCACCAAATAATCTGCGTGGCATATTCTTTCGTGAAAATAG
GGACATTTTCACCATCAAAGCTGGAATGTTTGGTATTAAGCCAATCATTG
TGAAAGGAATTTCTGACTCTTCAATTATTGAGCAGAAAAATCATTCTATA
GTGTTGGCTCACGAATTTAGAATTCTCCAATTTCTTGGTCCCCATCGTCA
CCTTATCGATTATTATGGCTTAGTCGAACTCAATGGGATTCCTCAGATAG
TCTTGGATGATGATTTTAAATTTGCTGGTTTTGAGAGGTTCTACCAAGAA
AACCGTCGCTTTGATATCTACACCATTCAGGCATTGTTTAGAGACATAAC
ATCTGTTGTTGAATTCCTCCATGTGAAGGGTGTTATTCACATGAATATAA
CAGAAGATTCTTTTGTGTTCAGTCTCGATGTTTCTGGTCCAGAGTGGAGG
TATTTCCCCATCCTTTGTGATTTCTCCTGTTGTTGTCTGGTCTCTGATGT
GAAAGTACTGACGCCACAATTGCAGAGCAGATTTCGATCAACAAAACATC
TTCCCGTAGAAGTGATGCGTGGAGAAAAATTGCCATCTTTCAATTGTGAC
ATTTATGCTGTAGCTGTTTTGATGTCACATTTTTCAAACCGTTTGAACAC
TCCTCAAGAACAACATATTTTTGATGAAGTTACTATCAAGCTTTTAAGAA
ATACTACAGATATTTTTATTGATTCATTGTATGATTTCATTAAAAACTAA
GTTAACGAAGATACTCCTGAATCGGACGAAGAAACTACCGAATGTGATAG
CTTTGAGATGGAGATTTGCAACAGAATGGCTGATATTATTCGTTTGGAGC
AACGACATGCTAAGTTTCATAAACATTTGAGTAGACCATCAAAAATTGGA
GCAGCTGCAATATGTAGTGGTATTACTGGATTAGTAAACGAACAACTTTT
TAGAGACATACAACTTCACATTATATCACCAAATAATCTGCGTGGCATAT
TCTTTCGTGAAAATAGGGACATTTTCACCATCAAAGCTGGAATGTTTGGT
ATTAAGCCAATCATTGTGAAAGGAATTTCTGACTCTTCAATTATTGAGCA
GAAAAATCATTCTATAGTGTTGGCTCACGAATTTAGAATTCTCCAATTTC
TTGGTCCCCATCGTCACCTTATCGATTATTATGGCTTAGTCGAACTCAAT
GGGATTCCTCAGATAGTCTTGGATGATGATTTTAAATTTGCTGGTTTTGA
GAGGTTCTACCAAGAAAACCGTCGCTTTGATATCTACACCATTCAGGCAT
TGTTTAGAGACATAACATCTGTTGTTGAATTCCTCCATGTGAAGGGTGTT
ATTCACATGAATATAACAGAAGATTCTTTTGTGTTCAGTCTCGATGTTTC
TGGTCCAGAGTGGAGGTATTTCCCCATCCTTTGTGATTTCTCCTGTTGTT
GTCTGGTCTCTGATGTGAAAGTACTGACGCCACAATTGCAGAGCAGATTT
CGATCAACAAAACATCTTCCCGTAGAAGTGATGCGTGGAGAAAAATTGCC
ATCTTTCAATTGTGACATTTATGCTGTAGCTGTTTTGATGTCACATTTTT
CAAACCGTTTGAACACTCCTCAAGAACAACATATTTTTGATGAAGTTACT
ATCAAGCTTTTAAGAAATACTACAGATATTTTTATTGATTCATTGTATGA
TTTCATTAAAAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:1311434..1312985 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 118-1083:967 |
| Aaloc | 1-117:1553 |
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