XLOC_039748 (mRNA) -

Overview
NameXLOC_039748
Unique NameXLOC_039748
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000182_pilon:88129..89514+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039748 ID=XLOC_039748|Name=XLOC_039748|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1386bp|location=Sequence derived from alignment at sc0000182_pilon:88129..89514+ (Clytia hemisphaerica_ch_hm2_pilon)
gaattttggaCTCCTCAAGaaaaaaaaGTCGAGAGTCTTCAAGAAAAATG GTTCAAAGAAGACATATTGAAAGACAATAAATGTGTTGTAAGttttttgg ttgaatttttcatttatatatGTGGCCAATAGCAAGAGTAGGGATGGGTG GGAAACACTAAATTTCTTTGTATATTTCACTATTCTGACTCCTTCTACTC TGACAACAAAAGTAACAAAACAGCCATGGAATCAGTCACAGAAGTTTGTT GTCCAAATGGACTTCTCCTATCCTGCTTTATGTgaattatttataatttt ttccaatgTCCTCATCTATTATTTTCATGAGATTTGTTAGGTAACGTAAT TGCTTAGACAGAAgtttttggctaaaatttttggcaaattttcgtAAGGC TTGATGACTGTTCGGTGATACCAGAcgatgaatttaagtaattccACCAG CAATAATTATTCGCATACCTAATTTCACCAGCCTAAATTAGGATACCTCC ATACTTCAGTGGATGCAAGTAAAACCAGCGGGAAATTGGGTATTAAGATT TGTTCAAATTGGCACGCTAACAACTCTCTCGAAGTAGCACACAGTATTGT TGGAAATTTTCCTGCGCGGTGTGCTATAAAGTATTTCTACAACTTGAGGT TTTAATTTTCCGTAATACTGAACAAATGATTTCCGGCCCATGTCTTGGGG TAAGTAATTTATGCTGGTGGAATTATTTAATTCAATAGACCGTTGCGGTC GCCTAAAGGACTATAAAACCTTCTAAAAATTCATGTTGGACAATTTTAAA TAACTAATTTAAGCTTTAAGAATGATTTTTATTgatctttttttcacttt taattcTACAGCTCAATTACAAAGGAACATCCAAGATGGAAAGTGGAATC GAACGCATGTTAGGACACAAATTGTTACTGGGTGGCCCACTCATGGACCA GTATCTTGAGCACATTGGCCatgcaattttgaaaaaactttcgcaAAAAC ATTTGACTGGTTATGTACTacctttaaaggttttcattCCTAATCAGAtt tttttGATACTGATGCGTCTTTTTGTGGCATATGGTTGCGAATCTCAAGA TGTATATCCAAAGGTGAGAAAGAGTTTGACAAGACCCAAACGGAAATTAC GAAAAGTTGCTTTGAACAAGCCTCCGACCAAATCTTTTATTTGGATGAAC TCAATGCAAAGTTGTGAAAAAATCTTTGCTCCAGAAAGATTTGATGGTAC AAACTTTTTAGCCAAAAGGGTTTTTGCTCGAAAATTGTTACCTGGACAAA AGAAACAGCAACAAGTGTACAATGGTAAAGCAGTGGTAGTTGTTACATCT TCTACCCCGATCAAACTTGAATACATTTATAAAACT

Coding sequence (CDS) from alignment at sc0000182_pilon:88129..89514+

>XLOC_039748 ID=XLOC_039748|Name=XLOC_039748|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1224bp|location=Sequence derived from alignment at sc0000182_pilon:88129..89514+ (Clytia hemisphaerica_ch_hm2_pilon)
gaattttggaCTCCTCAAGaaaaaaaaGTCGAGAGTCTTCAAGAAAAATG
GTTCAAAGAAGACATATTGAAAGACAATAAATGTGTTgaattttggaCTC
CTCAAGaaaaaaaaGTCGAGAGTCTTCAAGAAAAATGGTTCAAAGAAGAC
ATATTGAAAGACAATAAATGTGTTCTCAATTACAAAGGAACATCCAAGAT
GGAAAGTGGAATCGAACGCATGTTAGGACACAAATTGTTACTGGGTGGCC
CACTCATGGACCAGTATCTTGAGCACATTGGCCatgcaattttgaaaaaa
ctttcgcaAAAACATTTGACTGGTTATGTACTacctttaaaggttttcat
tCCTAATCAGAtttttttGATACTGATGCGTCTTTTTGTGGCATATGGTT
GCGAATCTCAAGATGTATATCCAAAGGTGAGAAAGAGTTTGACAAGACCC
AAACGGAAATTACGAAAAGTTGCTTTGAACAAGCCTCCGACCAAATCTTT
TATTTGGATGAACTCAATGCAAAGTTGTGAAAAAATCTTTGCTCCAGAAA
GATTTGATGGTACAAACTTTTTAGCCAAAAGGGTTTTTGCTCGAAAATTG
TTACCTGGACAAAAGAAACAGCAACAAGTGTACAATGGTAAAGCAGTGGT
AGTTGTTACATCTTCTACCCCGATCAAACTTGAATACATTTATAAAACTC
TCAATTACAAAGGAACATCCAAGATGGAAAGTGGAATCGAACGCATGTTA
GGACACAAATTGTTACTGGGTGGCCCACTCATGGACCAGTATCTTGAGCA
CATTGGCCatgcaattttgaaaaaactttcgcaAAAACATTTGACTGGTT
ATGTACTacctttaaaggttttcattCCTAATCAGAtttttttGATACTG
ATGCGTCTTTTTGTGGCATATGGTTGCGAATCTCAAGATGTATATCCAAA
GGTGAGAAAGAGTTTGACAAGACCCAAACGGAAATTACGAAAAGTTGCTT
TGAACAAGCCTCCGACCAAATCTTTTATTTGGATGAACTCAATGCAAAGT
TGTGAAAAAATCTTTGCTCCAGAAAGATTTGATGGTACAAACTTTTTAGC
CAAAAGGGTTTTTGCTCGAAAATTGTTACCTGGACAAAAGAAACAGCAAC
AAGTGTACAATGGTAAAGCAGTGGTAGTTGTTACATCTTCTACCCCGATC
AAACTTGAATACATTTATAAAACT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039748XLOC_039748-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000182_pilongenomesc0000182_pilon:88129..89514 +
Properties
Property NameValue
Aaloc88-612:862
Aaloc1-87:1