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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:353016..356845+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039712 ID=XLOC_039712|Name=XLOC_039712|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3830bp|location=Sequence derived from alignment at sc0000001_pilon:353016..356845+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCAAAGAGAACTGTTGTCAAGAAGAGATTAGATCTATTGGAAGG
TACAACTATTGTGTTCATGTTGTTTTGTGAGATTTATATAATAATACAGG
ACTTTATTATTAATGCTGTGGTTATTGCATCATTATTCATGTGAGTGCTT
GTGAGATACAAAAAGTAAGCTTTTCAAGACTTGAAATATAGTTATATGAA
AAGTCATTTTATCACAATTAATATCTACTGTCAAGTTTGCCTAATCCTGA
CCACCCCtatctactctcgggtacctaatagccgggggggttggaataag
caggggggttggaaaaaatctcaaaatttaataagcgggggggggttgga
ataaaaatgtcctgggtggaaaatgtttgaaaaggaggctaatacagcag
aattaagacaataaagggaactttcaaaaacattttcccaaaaattaata
agcgggggggttggaataagaatgtcctgggtggaaaattttcgaaaaat
taattagcgggggggacggctattaggtacccgagagtaacccTGACCTC
CCCCTCCTCTATATATAATGCGGCAATCataaatatcttcattttttttt
gcgtcctcATTGGGTCTAAAAAGTAAGTGGGTCGTTCGGTCggttgtaaa
aattttcgggtttcaatttttccatccatttttggagtggaGAGGAATct
gccagcagccaaaacaaccgcgaccccaaaatggcgcatgtaatgataaa
caaagtcaagcTGCGAATTATATCTCTGTCTAATATCTAATTTCATAGAT
TCTGGTACACTTGCCACTGTCTTGTATCAAGATGGGCTGGTAAAAGTTGC
TGATgttaattttttcaactttctgaAGTCCACGCAACCAATAACATCAT
TTCCAGCAAATGATCTTGGGCACACAACAGGACTTAATGTaagtgaatat
ttttttttactggattttttaatttttttaaatggttgTTGTTATGTTTC
ACATCACAACACAACATGAGGGTACCAGTATACACACCGAAAAGGGTCTC
TATGATATAAATGGTGCAGTCACCCAAACAGTATAAATTCCAGGACTCTA
ATAGATGATGATATTGTCTCTGTTTGATAAATCTAGTCAAGACATCTTTT
ACTTTCAGCTTAATGTTGGTGCtttttttACAGCAGGACTTTTTGCAGCA
TTTAGCATTGGAAGATTTTCAGATGTTAAGCTGCCATTCAAAAAGTCAAT
GCCCCTTTATAATTTCCCGTTTAGGTTGTCCCAAATAGCATGAAAGTCCC
GTTGGATAAAATTTCAGAAGGCCTTACTGCTTTTGCCTACTATGATGATG
GCCTATACTATCCTGCCACTGTGAACAAACTCAGCAATACAgttaaaaga
agaaagaaaggtatatatcaaattaaatgtgttaaatatacttcaatata
tctaataatatatatatGGTTGTGGTGCTATGTATAAGTAAGAAATGTTG
CTCTCATCACTGATAAACCCCATTCCTTAATTTTGAGGTAAAACATTACT
TTTTTGTCAGCGTTTTGCTTGCATATGGAACGTTGGATTTTCTTTTAAAG
CGCAGGATCACTGATTCTGAAGTCGAGTGACCCTCTGGGTATCATACTCT
CCATATTTCTTTCAGAACTGTAGGAGACCTgccttttaaaaacaaacaca
aagcAAATAGGATTTTTTAACCTCTAAAAGGCTTATTCACACATACACTT
TTTGAAATACAGGAGTGGTGATTGTATGCCTAGGCTACCAAGTTACCgac
ttcatttctttttcagacGACGAACGCAGCACTACCAATGatccaaataa
agaaaataacagTTTGTGCATATTTTccttacaaccctgtctcagtgGGA
TATATTATTTTAGGCAGGTTGTAGTAATTCACTATCAACTTCCCATAGGT
TTCTATCCTAATTCAGTAACATAAAGCAATAAATACAAATGGCTAAACaa
aggggttggaaattttctgAAGATCATAAtataataagcaggggggtttg
gaaaactttcttcTGAAAACACTGACAAAGGgcaaaaataggctaaaata
gCCTAATTGAAGAAGAATGAAGCTGAATGAAGGAACTTTCCTTTGtcagt
caaaatatttttttcaaaattaataaacatgtcctaataaggtccgatgg
ttggaaaaaatcaaaaaattaacaaatggAGAGGCTGTTTATTCAGCACA
TGAGAGTAAGGTCTTAAGCTAATGTCTATCTTTTTTCATTACATATATAT
ATAGAAACACCAAACAGTGATGAATCCAAAACTAAAAAAGGTAATTGGTA
AAAATGCAGAGGCAGctttgtgaatatttttagtTAATGGATATGTAAAA
TGTGCAATCGGCTTGTATTTTGccttttcttgaaattttatatACATATA
ACTGCCATCTGTCTCATACTATATATTGAATTAGATTTTTAgtggttttt
attttgataacatTTCGTTCATTTCTACAGGAAGAGGAAGCTCAGaaaaa
aaaCCCAAGAAGAAGCAAGGTGAattcattttcttcaatttgatcattat
ttattaaaatattttcaaaattaaactgtgattgaaattgaaaatgggaT
AAAAAAGATAATGTACTGTGGGATAATCAGAATTCTGTGAGgtttaaaaa
aacacaaataatAGTATCACATTCATTGAATCTTTAGGTAGTGCCAGTAA
GAACCATGTCAAGACAAATACTGGTAAATAGAAATTTGCATTGTTGATTT
TGTACAGTATATTCTAATATGCTACTGTATCGCATAATtcacaatatttg
aaaattgaaaaaagaagctatcaaatttgtaataaattttcaacttagga
tttatttaaattgaagaaatttctcATAAAAACGATTAGAtatatttata
cttttttcagaTACAGAAGAAAGtgagataaaaaaaaggaaaaagcaaGA
TGAGCAGGCCAAGAAAGAGGCCCAAGTCAACCGCAAACTTGTGGAATTAA
ACAGGTAAGAaatacaaatcaaaacatttacaGCGTAGCCTAAAGGAAGA
ATAGCCTCCCCCTGCcctatcaaataaaaataaccttTCCGGTTGTTGAC
TGTCTGGAGCATGAATCTGGAAGATgtccaataaattttgataggaACTT
AATGAAGTTAATGTTCTGCAAGTTTGGCAAGACTATTTCTGTATAAAGAT
TGAGGAAGGATGATGATTGAATgatacattttaatttttcagaatatACC
CCACAAACTTGCCATCAAAAGGTAATTccttatttattcaaattttacca
TTGCAAATGAATaataagatattctttattGTGATGCAAATAAAGCCAca
taattatatttttgaaataatacgCGCCTCTGATAAAACAATGTTTTATT
TCAGAACAATCTTACGCTATGGAACTACAACCCATTCCAAAGACTCCAAC
AACAGGTACAACctgtttatttttaagaaaatattattgattATTAGAGA
TGCAATTGCTTGTCCAGTGTTATCTGACTAATCTTTCTGTTCTTGTCCAC
TTTCAGTGGAAATCTAGCTTCTGCGCAAGAGAGCTAATATAGAAAATTGA
TCAAAGCATACAGTATGAAGCAACCcccttttcaaattttaaatccaAAA
TCAAACTATAATCAACTAATTTGTATTTACTAACACACTATTTACAGAGA
AAGGAATTAACAACCGTGATGATGCTAATGATGAATcatacaataataat
aataaaaagtatTGTTTATTATTGTTATAA Coding sequence (CDS) from alignment at sc0000001_pilon:353016..356845+ >XLOC_039712 ID=XLOC_039712|Name=XLOC_039712|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000001_pilon:353016..356845+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCAAAGAGAACTGTTGTCAAGAAGAGATTAGATCTATTGGAAGA
TGTCATCAAAGAGAACTGTTGTCAAGAAGAGATTAGATCTATTGGAAGAT
TCTGGTACACTTGCCACTGTCTTGTATCAAGATGGGCTGGTAAAAGTTGC
TGATgttaattttttcaactttctgaAGTCCACGCAACCAATAACATCAT
TTCCAGCAAATGATCTTGGGCACACAACAGGACTTAATATTCTGGTACAC
TTGCCACTGTCTTGTATCAAGATGGGCTGGTAAAAGTTGCTGATgttaat
tttttcaactttctgaAGTCCACGCAACCAATAACATCATTTCCAGCAAA
TGATCTTGGGCACACAACAGGACTTAATGTTGTCCCAAATAGCATGAAAG
TCCCGTTGGATAAAATTTCAGAAGGCCTTACTGCTTTTGCCTACTATGAT
GATGGCCTATACTATCCTGCCACTGTGAACAAACTCAGCAATACAgttaa
aagaagaaagaaagGTTGTCCCAAATAGCATGAAAGTCCCGTTGGATAAA
ATTTCAGAAGGCCTTACTGCTTTTGCCTACTATGATGATGGCCTATACTA
TCCTGCCACTGTGAACAAACTCAGCAATACAgttaaaagaagaaagaaag
acGACGAACGCAGCACTACCAATGatccaaataaagaaaataacaacGAC
GAACGCAGCACTACCAATGatccaaataaagaaaataacaAAACACCAAA
CAGTGATGAATCCAAAACTAAAAAAGAAACACCAAACAGTGATGAATCCA
AAACTAAAAAAGGAAGAGGAAGCTCAGaaaaaaaaCCCAAGAAGAAGCAA
GGAAGAGGAAGCTCAGaaaaaaaaCCCAAGAAGAAGCAAGGTAGTGCCAG
TAAGAACCATGTCAAGACAAATACTGGTAGTGCCAGTAAGAACCATGTCA
AGACAAATACTGaTACAGAAGAAAGtgagataaaaaaaaggaaaaagcaa
GATGAGCAGGCCAAGAAAGAGGCCCAAGTCAACCGCAAACTTGTGGAATT
AAACAGaTACAGAAGAAAGtgagataaaaaaaaggaaaaagcaaGATGAG
CAGGCCAAGAAAGAGGCCCAAGTCAACCGCAAACTTGTGGAATTAAACAG
aatatACCCCACAAACTTGCCATCAAAAGaatatACCCCACAAACTTGCC
ATCAAAAGAACAATCTTACGCTATGGAACTACAACCCATTCCAAAGACTC
CAACAACAGAACAATCTTACGCTATGGAACTACAACCCATTCCAAAGACT
CCAACAACAGAGAAAGGAATTAACAACCGTGATGATGCTAATGATGAATc
atacaataataataataaaaagtatTGTTTATTATTGTTATAAAGAAAGG
AATTAACAACCGTGATGATGCTAATGATGAATcatacaataataataata
aaaagtatTGTTTATTATTGTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:353016..356845 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 658-738:3750 |
| Aaloc | 607-654:3457 |
| Aaloc | 577-603:3294 |
| Aaloc | 484-573:2963 |
| Aaloc | 448-480:2740 |
| Aaloc | 409-444:2533 |
| Aaloc | 373-405:2307 |
| Aaloc | 328-369:1819 |
| Aaloc | 190-324:1275 |
| Aaloc | 52-189:801 |
| Aaloc | 1-48:1 |
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