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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:350044..352638- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039710 ID=XLOC_039710|Name=XLOC_039710|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2595bp|location=Sequence derived from alignment at sc0000001_pilon:350044..352638- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGAAAAAGGTGATAGGAAAAGAGCTTTTTCAAATTTTTTGGAGTG
CAATCCGCAGAAGACATTAAATGGATTAAACAGCAAATTAGTTAGAATCA
CTCCATCATCATCTCCATCATCAGTATCGGAAACAACAACATCCCCATCG
TGTTCTGGTGAAGAAGAAAAAAGTACAAGACCTGCTGATAGCAAATCTGC
TAGTAGTTACAACAAAGACAAAAATCTGAATGATGATGATGCTGATAGTG
TATGTTTCTCATTGGAACAAGTCCCACCCACAAACCAAATTGAAGAAAGT
AGAGAGGAGGAACAGAAACAACACTTATCTAACGAACCTTCGTCAGTCTC
ATCTACCAATCCATTATCAATATGGTCAAAAGATATTTATACCGTGAATG
ATCAGACATTGGATGAATACAATAACAAGACCTTTCATAGTAAGTGTAGT
TCTAAAATTAAATTATCACATATACAATACAATATGTATTATCTTTGTGA
TCTTAAACGTAAAATATACAGATATAAATAGTAGGTATTGAAAGATAATA
ATATTAAAACTTAAGCATAAGCCTGCTGCAAAGTGTTTGTTTTTTATATT
CTTTTCTTAAATTGAAGCCAGAAATCCTAAGCCTAAGTAATGTGTCCTTG
ATGTTTTTATACTGAAGAAGAAGTAATTTTTCGACAACAAAATCATAAAG
CAAAAAGGAAAGACACATTACTTTGATTTCTTTTACCGTCAACAGCTGAA
ACTTTTATCCTTTCCCTGCCAAACATTAGAACTTTATTATCTCCATAATT
TTAGTAGAAAAAATTTATCCCATTTAAATTAAAAATGTAAAATATTATTT
TCTCTTCAACAGATTTTACTTTTGACGAACAAGATGACGCATATGATAAC
GATGATTTTGATGAATTTTTTGAGAGCCAACAAATAACAGTGGATGAACC
AATTTGCAAGGGAACTAATATGACCCTTCAAAATTCTTTGTTGCTTCATC
TTGCTTTTGCTAGGAGACATAATTTGACTAAAGCTGCTCTAAAAGATTTA
CTTCACCTTACCAGTCTTCACCTTCGCAAGCCGAATAAATTTCCTCAAAG
TATTCAACAGCTTCATGCAAGTCTTGCATCACAAGAAAGCGATATTACAA
AATGTTTTTATTGTAAAAACTGTTATTGCAACATTGAAGATAAAGATCAA
GTTACGTGTGATAGTTGTGGCTACAAGGAATTTGGCCATTTCATAATCAA
CTCGATAGAAAATCAACTCAGTAAAATTTGCAAAAGTATGATCATCAAAT
TATATCTTAATTCAAAATCTGTTCCTAAATTACTTGTCCACTCTATTAAG
GTTTTGTCCTTTATTTTTATATGAGCTTTTGACAATTTGTTTTTTAGCAT
TTAAGTATTTGTTTGATCAAATGTTATTAATTTTTAAATCCCAATAGGAC
CAGGATTCAAGGAATGCTTGATAAAACCAGCCTTAAATACAACGTCTGTT
CTAAAAGATGTCGGCGATGCAAGAACATACCAAGAGCTAATCAAGCAGGG
GTATTTCAAACAAGATGGACTCAATCTAACATGTCAAATGAATACAGATG
GAGTTAGCCTCTTTAACAGCAGTTCCTTTTCTGTTTGGCCTGTTTATCTT
AAAATCAATGAACTACCACCATTGTTCAGGTAAAAACTTTTTTATAAATT
TTTTTACTGAATGATCAGAAAGGGGTTGGATTTGAAGGTTGTGTGGATGT
TGTAATTACTATGTGTCTTCTAAGCCAATAGATTAGATATTTTGAATTGG
GAATTGAAATTATTTTTATTGTTTTTAAGCATTCTAAAATTGAAACTTTT
AGGAAAACCAAAAAGAATAGAATCATTGCTGGTTTGTGGTTTGGCTATGA
AAAACCATTTATGAGAACATTCCTTCGCCCTATTGTAGAAAGTCTGAAAT
CTCTAGCTGTTGAAGGTAAATCAAAATAGACTTTCATATATCGTGTAAAA
CCACTTTGAAAATTGTGGAGCGGGCCCTGTACACTATTATGTATTTTTTT
GTTGAATGTTTTATGATAACATGAAATAAATAATAAATTAATTTGTAATA
ATACCCATTTTTTAGGAACTTCTATGGAATATTTTAATGGCCAAAAAGAG
ATTGTCAGAATATTAGTTATTGGAGGACTGTTTGATCTTCCAGGTATGAA
AATTTATACAGGAATAGATAGTAAATTCATTTATCCTTTATAATCTTGAT
ATAATAATTGATTATCATGACAGTGTCTTTGCCACTGAAGGGCTGATAAA
AAAACAAGGATAGAATGAACAAACCAGCGAAATAAACAAACGAAAACTGA
ATGCTTTTATCACTATTTTAATCCACAGTATGTTAATCTATGAGCCAATC
AAAACATTTTGTTTTAACATTGAGCTAGCATGAACTATAAATTTCATTTA
TTTTATTCTAGCTAAGTGCTTGGTGCAAGAAACAGTCCAGTTCAATGGAT
ATTTTGGGTGCAGTTGTTGCGAAATCAAGGGTCAAAATGTGTCAACTTCC
AAAAATGGTTCAAAAATTGCTTTCCCGTTCGAGGAAGAAGTGAAG Coding sequence (CDS) from alignment at sc0000001_pilon:350044..352638- >XLOC_039710 ID=XLOC_039710|Name=XLOC_039710|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2838bp|location=Sequence derived from alignment at sc0000001_pilon:350044..352638- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGAAAAAGGTGATAGGAAAAGAGCTTTTTCAAATTTTTTGGAGTG
CAATCCGCAGAAGACATTAAATGGATTAAACAGCAAATTAGTTAGAATCA
CTCCATCATCATCTCCATCATCAGTATCGGAAACAACAACATCCCCATCG
TGTTCTGGTGAAGAAGAAAAAAGTACAAGACCTGCTGATAGCAAATCTGC
TAGTAGTTACAACAAAGACAAAAATCTGAATGATGATGATGCTGATAGTG
TATGTTTCTCATTGGAACAAGTCCCACCCACAAACCAAATTGAAGAAAGT
AGAGAGGAGGAACAGAAACAACACTTATCTAACGAACCTTCGTCAGTCTC
ATCTACCAATCCATTATCAATATGGTCAAAAGATATTTATACCGTGAATG
ATCAGACATTGGATGAATACAATAACAAGACCTTTCATAATGATGGAAAA
AGGTGATAGGAAAAGAGCTTTTTCAAATTTTTTGGAGTGCAATCCGCAGA
AGACATTAAATGGATTAAACAGCAAATTAGTTAGAATCACTCCATCATCA
TCTCCATCATCAGTATCGGAAACAACAACATCCCCATCGTGTTCTGGTGA
AGAAGAAAAAAGTACAAGACCTGCTGATAGCAAATCTGCTAGTAGTTACA
ACAAAGACAAAAATCTGAATGATGATGATGCTGATAGTGTATGTTTCTCA
TTGGAACAAGTCCCACCCACAAACCAAATTGAAGAAAGTAGAGAGGAGGA
ACAGAAACAACACTTATCTAACGAACCTTCGTCAGTCTCATCTACCAATC
CATTATCAATATGGTCAAAAGATATTTATACCGTGAATGATCAGACATTG
GATGAATACAATAACAAGACCTTTCATAATTTTACTTTTGACGAACAAGA
TGACGCATATGATAACGATGATTTTGATGAATTTTTTGAGAGCCAACAAA
TAACAGTGGATGAACCAATTTGCAAGGGAACTAATATGACCCTTCAAAAT
TCTTTGTTGCTTCATCTTGCTTTTGCTAGGAGACATAATTTGACTAAAGC
TGCTCTAAAAGATTTACTTCACCTTACCAGTCTTCACCTTCGCAAGCCGA
ATAAATTTCCTCAAAGTATTCAACAGCTTCATGCAAGTCTTGCATCACAA
GAAAGCGATATTACAAAATGTTTTTATTGTAAAAACTGTTATTGCAACAT
TGAAGATAAAGATCAAGTTACGTGTGATAGTTGTGGCTACAAGGAATTTG
GCCATTTCATAATCAACTCGATAGAAAATCAACTCAGTAAAATTTGCAAA
AATTTTACTTTTGACGAACAAGATGACGCATATGATAACGATGATTTTGA
TGAATTTTTTGAGAGCCAACAAATAACAGTGGATGAACCAATTTGCAAGG
GAACTAATATGACCCTTCAAAATTCTTTGTTGCTTCATCTTGCTTTTGCT
AGGAGACATAATTTGACTAAAGCTGCTCTAAAAGATTTACTTCACCTTAC
CAGTCTTCACCTTCGCAAGCCGAATAAATTTCCTCAAAGTATTCAACAGC
TTCATGCAAGTCTTGCATCACAAGAAAGCGATATTACAAAATGTTTTTAT
TGTAAAAACTGTTATTGCAACATTGAAGATAAAGATCAAGTTACGTGTGA
TAGTTGTGGCTACAAGGAATTTGGCCATTTCATAATCAACTCGATAGAAA
ATCAACTCAGTAAAATTTGCAAAAGACCAGGATTCAAGGAATGCTTGATA
AAACCAGCCTTAAATACAACGTCTGTTCTAAAAGATGTCGGCGATGCAAG
AACATACCAAGAGCTAATCAAGCAGGGGTATTTCAAACAAGATGGACTCA
ATCTAACATGTCAAATGAATACAGATGGAGTTAGCCTCTTTAACAGCAGT
TCCTTTTCTGTTTGGCCTGTTTATCTTAAAATCAATGAACTACCACCATT
GTTCAGGACCAGGATTCAAGGAATGCTTGATAAAACCAGCCTTAAATACA
ACGTCTGTTCTAAAAGATGTCGGCGATGCAAGAACATACCAAGAGCTAAT
CAAGCAGGGGTATTTCAAACAAGATGGACTCAATCTAACATGTCAAATGA
ATACAGATGGAGTTAGCCTCTTTAACAGCAGTTCCTTTTCTGTTTGGCCT
GTTTATCTTAAAATCAATGAACTACCACCATTGTTCAGGAAAACCAAAAA
GAATAGAATCATTGCTGGTTTGTGGTTTGGCTATGAAAAACCATTTATGA
GAACATTCCTTCGCCCTATTGTAGAAAGTCTGAAATCTCTAGCTGTTGAA
GGAAAACCAAAAAGAATAGAATCATTGCTGGTTTGTGGTTTGGCTATGAA
AAACCATTTATGAGAACATTCCTTCGCCCTATTGTAGAAAGTCTGAAATC
TCTAGCTGTTGAAGGAACTTCTATGGAATATTTTAATGGCCAAAAAGAGA
TTGTCAGAATATTAGTTATTGGAGGACTGTTTGATCTTCCAGGAACTTCT
ATGGAATATTTTAATGGCCAAAAAGAGATTGTCAGAATATTAGTTATTGG
AGGACTGTTTGATCTTCCAGCTAAGTGCTTGGTGCAAGAAACAGTCCAGT
TCAATGGATATTTTGGGTGCAGTTGTTGCGAAATCAAGGGTCAAAATGTG
TCAACTTCCAAAAATGGTTCAAAAATTGCTTTCCCGTTCGAGGAAGAAGT
GAAGCTAAGTGCTTGGTGCAAGAAACAGTCCAGTTCAATGGATATTTTGG
GTGCAGTTGTTGCGAAATCAAGGGTCAAAATGTGTCAACTTCCAAAAATG
GTTCAAAAATTGCTTTCCCGTTCGAGGAAGAAGTGAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:350044..352638 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1288-1419:133 |
| Aaloc | 1210-1284:479 |
| Aaloc | 1096-1206:743 |
| Aaloc | 865-1092:1147 |
| Aaloc | 442-861:1732 |
| Aaloc | 1-438:2596 |
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