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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000050_pilon:683652..686955+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039696 ID=XLOC_039696|Name=XLOC_039696|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3304bp|location=Sequence derived from alignment at sc0000050_pilon:683652..686955+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCCAGTATAATTCCATTTGATCCAACCATCACCCTTGGAAATGT
TGTCAATCCATTGAAATTCAAGGTACATTGTTCTCTAAAAAGTGCTAGCT
ATTTACAGCATTCAATAAAAACCAGGAGTGTTGCTGTTGCTGTTTTGAAa
taaccagtaaatttttgtagAGTGTTGGCTGCTCTCATTTTCAGCATTTA
GAACCACAAGCTGTTTTTATCCTGTTcgtatttttttagaaaaattgagg
TACTTGCAGGCTTACTACGCTGTTTAAATTGTTTTTCCTCTGATTGTCTc
gaaattcattcattcaattcATGGCATCAACTGTAttaagttgttcttaa
ttttcaattttttgatatcTTGATTCTCGTTCTTACGAaattgttttaat
aaaaaaagattcGGTAGCCAagaaaaaatggggaaaaaccCTTGCAGATG
actcactccgctcactccactcctcactcactcactccacccactcttca
ctcTGAAGATGATAGCTGAAAGAAGGTTTTTAACGAAGACTTTGATTATT
TTACTAAATTCTTTTTCCTAGTGGGAGCTTCTTAGTTTCTCAATATTGAT
ACGTGAGATTTTAAGAacgtaaaatgaaaatttcaaaatcagttttttcc
tttttataacGAAGGAACTCGAAGCAATTGGTAAATTGCAAATGGAAATT
GACACAAAACAAGATCAACTAAATGGTCTTCTGGCTGGTAAAAGCAGTTT
AGATATGATCATCCAAGAAGTCAAAGCCATGAAAGTTGACCTTAGTGAAG
CTGAGCTGAAAGATGCCTCCAAAGCGATGGATCAAGAGATTAAGAAAGTT
ATGAAGGAATACGCTTTGGTTCAAATGGGAAACTTACCAAAGATTCAAAC
ACATAAAGCTAAGATTGCCACCATTGCAGATCACGTCGAATCACCCATGG
ATTACAACAAATCATTGTAGGTTTACCTTAGTTGAATGAATTTtcacttc
aatatttttttacgaAACGTCATTCTCTTTTATTTAGCCAAAATTCAGAT
TTAATAATTTAAATTATTAGGGTACAAACTTCAGTTTTTTACTTTACGAA
TCTGCAACAATCAAATTTTGGTACACCTGTTTTAACTGATTAGTattacc
atagtataagaaagccgcggctggaatgagtacagctgaatttctgttgt
tctatctatgtcgtaagaacgaatttttttatggtgCAGTGACAACTTCc
attgtcaatttaatttgacttttaacaaactccctcgttagacgtaattt
tgctcataaacgcaaatctcttgataattcacgcattcataatcaaagta
aaagaaaagactcttgatttaaaagtactagaacgtcagaatgtcagtgc
tttaagaaaattgagtgcctcgaaatgccttccagattattttgaaaaaa
tcttactggtattagtaaataaatattcaagctgcattctgtgaaaattt
catttaaaaaacaaCAGTATTAAGGTGACAGCAAGCattcaaagtttaac
atttgaaaattagttcttttaataaaatgtgtgttatttggtcctaaatt
tatttggaatttacaaaaatatacttcaaataaggtgataagagaggaca
gtgagaaaaatttgagacttgaaaagtaattgttcttcaattgaatatta
tgaacacttttaaggttaaggattttgttagcttcgacttagttcttata
aatcacggagacacagatagaacatccattAACGACAAGAACAATAGcgt
catcattccagccgcggctttcttatactatggtattACCATCAATAACA
ACTATAATTGCCAGGAAAGCTTTTGTTAAAGCCTTGGAGCTATCACGAAA
GAATACGGTTAGGTTCTAGCGCTTTCGTCCTAAGATAAGCCTAAAGTAAG
TTTTAATCTTttggtacacgtttttatataGGAACAAACAAGTCTTCGAT
GACCaaaaaaaTAAGGtcattttaagaacttttttagtcttgaaagattt
ttgatgttcttataacaatGACGTACATTTTTCTTGACATTGAGCTTGTc
cttgcttttcttttcatgCAGGTTGAAGAAGGATTTACCAATCAGCTCGA
ACACAATCAAGTTGAATTCCCAATACTTCACATTCAGTCAAGAATCGCAA
CAAAGTGAAGCCTCCATGGCTGCAATGAAGTCATTCGTCAGTGGAGAAAC
CAAATTCTTAGGTGACACCATTGGTGGGAAAGTCTCTGCCGCTGTTCAAC
ATCAAATGACCAAACAAAGAGAGCTACATGAAATCAGTGGTACTTTGGTC
GTCACAGCAACCTGTACTCACGCTAATGCTGCCATATTTGCTCCATTCGT
AATAGATGCAGACAAGGCAGTCCATGCTTGGAACGATACGTTCTCAAATA
AGATAAGTATGCTGACagaagaagaaatgaaaaagcTGGCCAAAGAAACT
GGTGAATCTGACAAACTTCATTTGGTGTCAGGTGCTACTTATGGATCTTG
TTTCGTTGGTATGGTTCACACCAAGAAAACTGAATCTAACGAGGATACCC
AACGCATGTTGTCCACTGCTCAATCCATGTCTGCCAATTTCGATATTGGA
GCCTTCTTTGCCAGCTACTCTGGTGGGTTTGGTGTAGACTCCAGCTTCTC
TAATGATCTGAAAGCTCTTTTGAGTAGCCAGATGGTGTCTTCACATGTCA
GCTTGGTTTGTGAAGGTTGTATCCCTACCATCACCAGTAATAAAGTGGAA
CTTGGTGTCAAAGCGTTTGCTGACTTTGATCCAGCTCAGACCATGGAGAA
ACTGGCAACTCTCAATACTCAAACCAACAAAGCCAATGAAACAGTGAGCA
GTGCTGCAGACAAGGCTCGCAAAGGAAAAGAAGTCACCGAGTTGCGTGGC
AACGAGATCAAAAACACAATGGCATCATTAAGCAAGATTGATGAAGGCAA
GGATAGCGTGCTGAATGTCAACTCGCTGATGTCTGGATTGGAAGATTACG
TCACCCAAGCCAAGGAAGCCAAGACCGGTGTACCAATCAATTTCTTCATC
AAAAGTTTGACCAGAGCTGACATTGCCAAATTATGGCTTGACAAATATGC
CAGCAAAGTGCCTGaaaaaaaaGCCGCGTCCAAACCAAATCCATCAGGAG
AGAAACCAAAGCCAGAGAAAGAGGCAGCTGACCCAATGGCTGGACGAGTA
GAAGAAAATCTTGAAAGTGTGGGTCAATTCTCAAAAAGTTGGGACTTTCA
GTGA Coding sequence (CDS) from alignment at sc0000050_pilon:683652..686955+ >XLOC_039696 ID=XLOC_039696|Name=XLOC_039696|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3114bp|location=Sequence derived from alignment at sc0000050_pilon:683652..686955+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCCAGTATAATTCCATTTGATCCAACCATCACCCTTGGAAATGT
TGTCAATCCATTGAAATTCAAGATGGCTGCCAGTATAATTCCATTTGATC
CAACCATCACCCTTGGAAATGTTGTCAATCCATTGAAATTCAAGGAACTC
GAAGCAATTGGTAAATTGCAAATGGAAATTGACACAAAACAAGATCAACT
AAATGGTCTTCTGGCTGGTAAAAGCAGTTTAGATATGATCATCCAAGAAG
TCAAAGCCATGAAAGTTGACCTTAGTGAAGCTGAGCTGAAAGATGCCTCC
AAAGCGATGGATCAAGAGATTAAGAAAGTTATGAAGGAATACGCTTTGGT
TCAAATGGGAAACTTACCAAAGATTCAAACACATAAAGCTAAGATTGCCA
CCATTGCAGATCACGTCGAATCACCCATGGATTACAACAAATCATTGAAC
TCGAAGCAATTGGTAAATTGCAAATGGAAATTGACACAAAACAAGATCAA
CTAAATGGTCTTCTGGCTGGTAAAAGCAGTTTAGATATGATCATCCAAGA
AGTCAAAGCCATGAAAGTTGACCTTAGTGAAGCTGAGCTGAAAGATGCCT
CCAAAGCGATGGATCAAGAGATTAAGAAAGTTATGAAGGAATACGCTTTG
GTTCAAATGGGAAACTTACCAAAGATTCAAACACATAAAGCTAAGATTGC
CACCATTGCAGATCACGTCGAATCACCCATGGATTACAACAAATCATTGT
TGAAGAAGGATTTACCAATCAGCTCGAACACAATCAAGTTGAATTCCCAA
TACTTCACATTCAGTCAAGAATCGCAACAAAGTGAAGCCTCCATGGCTGC
AATGAAGTCATTCGTCAGTGGAGAAACCAAATTCTTAGGTGACACCATTG
GTGGGAAAGTCTCTGCCGCTGTTCAACATCAAATGACCAAACAAAGAGAG
CTACATGAAATCAGTGGTACTTTGGTCGTCACAGCAACCTGTACTCACGC
TAATGCTGCCATATTTGCTCCATTCGTAATAGATGCAGACAAGGCAGTCC
ATGCTTGGAACGATACGTTCTCAAATAAGATAAGTATGCTGACagaagaa
gaaatgaaaaagcTGGCCAAAGAAACTGGTGAATCTGACAAACTTCATTT
GGTGTCAGGTGCTACTTATGGATCTTGTTTCGTTGGTATGGTTCACACCA
AGAAAACTGAATCTAACGAGGATACCCAACGCATGTTGTCCACTGCTCAA
TCCATGTCTGCCAATTTCGATATTGGAGCCTTCTTTGCCAGCTACTCTGG
TGGGTTTGGTGTAGACTCCAGCTTCTCTAATGATCTGAAAGCTCTTTTGA
GTAGCCAGATGGTGTCTTCACATGTCAGCTTGGTTTGTGAAGGTTGTATC
CCTACCATCACCAGTAATAAAGTGGAACTTGGTGTCAAAGCGTTTGCTGA
CTTTGATCCAGCTCAGACCATGGAGAAACTGGCAACTCTCAATACTCAAA
CCAACAAAGCCAATGAAACAGTGAGCAGTGCTGCAGACAAGGCTCGCAAA
GGAAAAGAAGTCACCGAGTTGCGTGGCAACGAGATCAAAAACACAATGGC
ATCATTAAGCAAGATTGATGAAGGCAAGGATAGCGTGCTGAATGTCAACT
CGCTGATGTCTGGATTGGAAGATTACGTCACCCAAGCCAAGGAAGCCAAG
ACCGGTGTACCAATCAATTTCTTCATCAAAAGTTTGACCAGAGCTGACAT
TGCCAAATTATGGCTTGACAAATATGCCAGCAAAGTGCCTGaaaaaaaaG
CCGCGTCCAAACCAAATCCATCAGGAGAGAAACCAAAGCCAGAGAAAGAG
GCAGCTGACCCAATGGCTGGACGAGTAGAAGAAAATCTTGAAAGTGTGGG
TCAATTCTCAAAAAGTTGGGACTTTCAGTGAGTTGAAGAAGGATTTACCA
ATCAGCTCGAACACAATCAAGTTGAATTCCCAATACTTCACATTCAGTCA
AGAATCGCAACAAAGTGAAGCCTCCATGGCTGCAATGAAGTCATTCGTCA
GTGGAGAAACCAAATTCTTAGGTGACACCATTGGTGGGAAAGTCTCTGCC
GCTGTTCAACATCAAATGACCAAACAAAGAGAGCTACATGAAATCAGTGG
TACTTTGGTCGTCACAGCAACCTGTACTCACGCTAATGCTGCCATATTTG
CTCCATTCGTAATAGATGCAGACAAGGCAGTCCATGCTTGGAACGATACG
TTCTCAAATAAGATAAGTATGCTGACagaagaagaaatgaaaaagcTGGC
CAAAGAAACTGGTGAATCTGACAAACTTCATTTGGTGTCAGGTGCTACTT
ATGGATCTTGTTTCGTTGGTATGGTTCACACCAAGAAAACTGAATCTAAC
GAGGATACCCAACGCATGTTGTCCACTGCTCAATCCATGTCTGCCAATTT
CGATATTGGAGCCTTCTTTGCCAGCTACTCTGGTGGGTTTGGTGTAGACT
CCAGCTTCTCTAATGATCTGAAAGCTCTTTTGAGTAGCCAGATGGTGTCT
TCACATGTCAGCTTGGTTTGTGAAGGTTGTATCCCTACCATCACCAGTAA
TAAAGTGGAACTTGGTGTCAAAGCGTTTGCTGACTTTGATCCAGCTCAGA
CCATGGAGAAACTGGCAACTCTCAATACTCAAACCAACAAAGCCAATGAA
ACAGTGAGCAGTGCTGCAGACAAGGCTCGCAAAGGAAAAGAAGTCACCGA
GTTGCGTGGCAACGAGATCAAAAACACAATGGCATCATTAAGCAAGATTG
ATGAAGGCAAGGATAGCGTGCTGAATGTCAACTCGCTGATGTCTGGATTG
GAAGATTACGTCACCCAAGCCAAGGAAGCCAAGACCGGTGTACCAATCAA
TTTCTTCATCAAAAGTTTGACCAGAGCTGACATTGCCAAATTATGGCTTG
ACAAATATGCCAGCAAAGTGCCTGaaaaaaaaGCCGCGTCCAAACCAAAT
CCATCAGGAGAGAAACCAAAGCCAGAGAAAGAGGCAGCTGACCCAATGGC
TGGACGAGTAGAAGAAAATCTTGAAAGTGTGGGTCAATTCTCAAAAAGTT
GGGACTTTCAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050_pilon | genome | sc0000050_pilon:683652..686955 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 376-1557:2123 |
| Aaloc | 73-372:665 |
| Aaloc | 1-72:1 |
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