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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1794092..1797202- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039665 ID=XLOC_039665|Name=XLOC_039665|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3111bp|location=Sequence derived from alignment at sc0000023_pilon:1794092..1797202- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGACGATGAACTTTCAGAGAGTGGGGATCTAAACATTGGAGTAAG
TGTATTCTAAACTGTCCCTCCAGCCCTCCAGTCGCTAGCTAAATTTCAGC
AGTTTCAGTATTCTATATAATATGTCCGCTGGGGTGGTCCCTCTTTTGGG
TTCTGTTAAAAAGTTCATACAAAAATTGTGTTTTAGTTTCAGTTTTGTTT
TGCTTTAGCACTACGAAGGCGATAGAGATGAACTAGAAAGAAGACATGGA
TTTGGGAAAGCATTCTTTCCAAACGGTGACACATACGAGGGTGAATATTT
GCATGGAAGACGAAATGGAAAGGTAACATTCGACAATAGCTTATGTACGG
ACCCGGGATTCGACATTCTGATTGAGCCCGGGCCCAGGGAGGGGTACTAT
TTTTGCGAGATGTCCGAGCCAAAGTTCGAAAATCGACCCTTTGACTTTGA
GAGACTGAATTTCGAAAATTTTCTCCATGTTTTGACGTTTTTTCCACCCT
CAGAAAGAATATTTACCCTAATAATCGATGACCCTTTCAGTGAGTTGATT
TTTGATTTTGGTAATTTTGGAACCTATACGGAGATGGTTTTTGCGGGGTT
TTTGTACCCCTTTAAGGGACTGTTCGAGAGTGTGAACAAAGGACCCTTTG
TGGCTCACACATACAAGGTACACTTTCTTTCTGTTTCGTTCGTTCGTTCG
TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTCGTTCGTTCGTTCGTTCGTTTCGTTTTCGTTCGTTCGTTCGTTCGTCG
TCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTTCGTTCGTCGTTC
GTTCGTTCGTTCGTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTCGTTCGTTCGTTCGTTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGT
TCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCGTTTGCTCGTCACAATTTTTTATCATACCT
TAGGGGGTCTACCGTTTTGCCAGTGGAGCTTTTTATAATGGTGACTACAT
TGATAACAAAAGAGAAGGGCGTGGTACATTCGTTTATCCCGATGGTTCCA
AGTATGACGGTAAGAATTTCCAGATGATATTTTAAAAATCATTATCACCG
AGTGAAATTGTAATAGTCTGAGGAAAATCGCAGTCAAGTTCACAACATTT
CAAGGCTTTGCAGTCTCCAAAACACCCAATTTTTAGAAAAATGGACAAAA
ATATGGTGAAAATTAGAACATGTTAAGAACATTTTCTGTTAAGACTCAAA
AAGTTAAGAACATTCCAAGGCTTGAAAAACGTTGGATGTTCTTATAATTA
AAAAACGTGTATTCCAATTTGTTCAAAGTTTAACCAAATAAACAACAATT
TGCTGATTCAACTTTAAAGCAAGCCTTATTTACAATAGGAAGGTGGGACC
TGGACACACGACATGGTTACGGTATATATGAATACGAGAATGGTGACCGG
TACGAAGGCGAATGGTTCCGTAACCGGAAAACTGGAACTGGGAAATATTT
CCACAAAGAATCAGAGTCGATTGTAAGTTCCGTTATGATTAACATTCTTT
CTTAATATAATAATGTGTTTTACAATGCTAATTCAGTCTACAAAAAATAT
CTGAACAGGTAGAACTCCTTGCTGGTCTAAAATCACTGTGTCTTGTTTCT
CGAACTCGCGAACCATTCAAAAAGCAACTAGAGTGCGTAAAAGCAGCAAA
TCCACTGACATCGGAGTGAAAATGATTTATGGGGGGTGTTCGGTATGACG
GGGACACTAGACGATCCTATCGTCTACATAAGTGACTAAAAAGGGAATAA
TTTATGAGGCAGGATAAATTTGAAAATGGAGTTTAGCACGGGACGGAGTA
GGCAGTGACGTAAGTAGGTGTAATTACAGCGTTTGTTCCAAATTCTACCG
TCACTATTATTTTTTCCCGTAAACTGCCGTGATGGCAGTAGACTCTGCGC
ATATATTCTTTTCTCGTTTAAAGTACTATCCCTCTAACGGACGATAGCAT
TATCTACAGGGACCCCCACCATCAATTTTATGGATAACATCATGGACGAT
TTTAATTGAATTTTTATTAATGATGCTTTATAGAGGAGATTTTTATTCAG
CAGATGCTAGTGTGGACTATGATATAGTCTAAGACGAATCACTATCTAAG
AAAAAAGCCAAAAGCCGAAGAACTCGCAAACAGGCGTTTTTTTTGCCGAA
AAGAGTTTACAGCCGGTAGAGTTTGCCGGTTCTTCGAAACTCTCCCGTCG
ATTTTTTCCTGTATACCACCATAACGCCATACCACCATTTTTCCCGCCTT
TACTATCACTGTAACGGACGATAACATCGTCTAATGCTAGGGTCAATCGG
CAAATCAAAAAAAAAAAAGATTTGAAACTGGTGACGAGAATGAGAGGGTT
ACAACTGGTGGTTAAATAATGGTGGTGTTTGTTTTATACTTTTAACATCT
GATTTCACTTTTCAGTCCGAAGGTCAATGGGTAGATGGTAAGATGACGGG
CCAAGGTAGTATTCATTATGGTTATTGCAATTTCCAAGGACGATTTAACG
CCAATGTTGTAAGTTATAACTTTCATGAGTACATTTTTCATGAGTCATTT
TCTCCTACCGATGCTAAAATTTTGAAATTGGGACAAAGCAGATTTCTTGT
TTCTTCTTTTAATAAATAACATAATTCTTTAGAAATTTTAGAATATTCAA
CAGACTGTTTTCAGCTAAAATGACGCTGCTAGCACCTGTCCACCGGTAAA
TTTCTTCCGGTTTGATAAATAAAGGTTTGAGCCATACCCAAGGGGCTCAA
GAGCCTACAATTTTTATAATTTTCCCTGTTTTATAGGTCAAAGGGGTTGG
AAAATTTATTTTCCCAAAGAGAAGGATTGAAATCAATGGTGTCTACAAGG
CATTTCTACTT Coding sequence (CDS) from alignment at sc0000023_pilon:1794092..1797202- >XLOC_039665 ID=XLOC_039665|Name=XLOC_039665|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1134bp|location=Sequence derived from alignment at sc0000023_pilon:1794092..1797202- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGACGATGAACTTTCAGAGAGTGGGGATCTAAACATTGGAATGTC
TGACGATGAACTTTCAGAGAGTGGGGATCTAAACATTGGACACTACGAAG
GCGATAGAGATGAACTAGAAAGAAGACATGGATTTGGGAAAGCATTCTTT
CCAAACGGTGACACATACGAGGGTGAATATTTGCATGGAAGACGAAATGG
AAAGCACTACGAAGGCGATAGAGATGAACTAGAAAGAAGACATGGATTTG
GGAAAGCATTCTTTCCAAACGGTGACACATACGAGGGTGAATATTTGCAT
GGAAGACGAAATGGAAAGGGGGTCTACCGTTTTGCCAGTGGAGCTTTTTA
TAATGGTGACTACATTGATAACAAAAGAGAAGGGCGTGGTACATTCGTTT
ATCCCGATGGTTCCAAGTATGACGGGGGTCTACCGTTTTGCCAGTGGAGC
TTTTTATAATGGTGACTACATTGATAACAAAAGAGAAGGGCGTGGTACAT
TCGTTTATCCCGATGGTTCCAAGTATGACGGAAGGTGGGACCTGGACACA
CGACATGGTTACGGTATATATGAATACGAGAATGGTGACCGGTACGAAGG
CGAATGGTTCCGTAACCGGAAAACTGGAACTGGGAAATATTTCCACAAAG
AATCAGAGTCGATTGAAGGTGGGACCTGGACACACGACATGGTTACGGTA
TATATGAATACGAGAATGGTGACCGGTACGAAGGCGAATGGTTCCGTAAC
CGGAAAACTGGAACTGGGAAATATTTCCACAAAGAATCAGAGTCGATTTC
CGAAGGTCAATGGGTAGATGGTAAGATGACGGGCCAAGGTAGTATTCATT
ATGGTTATTGCAATTTCCAAGGACGATTTAACGCCAATGTTTCCGAAGGT
CAATGGGTAGATGGTAAGATGACGGGCCAAGGTAGTATTCATTATGGTTA
TTGCAATTTCCAAGGACGATTTAACGCCAATGTTGTCAAAGGGGTTGGAA
AATTTATTTTCCCAAAGAGAAGGATTGAAATCAATGGTGTCTACAAGGCA
TTTCTACTTGTCAAAGGGGTTGGAAAATTTATTTTCCCAAAGAGAAGGAT
TGAAATCAATGGTGTCTACAAGGCATTTCTACTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1794092..1797202 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 493-567:76 |
| Aaloc | 400-492:447 |
| Aaloc | 268-399:1522 |
| Aaloc | 160-264:1959 |
| Aaloc | 46-159:2904 |
| Aaloc | 1-45:3112 |
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