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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1781345..1784983- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039663 ID=XLOC_039663|Name=XLOC_039663|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3639bp|location=Sequence derived from alignment at sc0000023_pilon:1781345..1784983- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGGTTTTTATGCTGGAATAATTGCATCATCATTGTTTGTTGGTCGATT
TTTTGGAGGGTAAGATTTATAGGTTTTCCAGATCGAGGCTGCGTGTAATT
TGTAATTTAAGATGTCTGCGATTCAGAACAAGAGAAATCAAATAATGGAT
GGACTGTAAAAATATTTTTGATCGGAAGGAATAAGCAAGTTCCTTTCAAA
TCCATCAAAATAAGTCAAAATTTAAAAAAATGTTTGCTGCCAAATTTTAT
TTTCTTCGAATTTTAGCTTCTTGTCAAACTAAGTCCTTGCTAAAACTAAA
AAGTCTATCGTACGTATCCGTTAATATGTCTTTAGCCGTTTGATGATCTT
TATGGCAGTCGGCGACCTGTTATCGCTGATCAGTCCTGTCTTTTTTCTTT
CCTCTTCGGTGCCTTGTTGTATTTATCGTTATTCGAAATTTCAGATACTT
TTGGGGTTGGCTGACAGACAAGATTGGTCGACGTCCAGTTCTTCTCCTCT
CCTCGACTCTGGTGTTATTGGCAACCCTTGCGTTTGGATTCTCGACCACC
TTTGAAGTTGCAGTGCTGACCAGGTTTCTTCAAGGATTATTCAATGGTAA
TGCAATTATCGTTAATTTCATGATCACAGACCCATTGAGTTAAGTCTCAC
TGGAAGATTTGGCCATTCATCTCCAGTTGAAAAATTACCTTACAATTTTC
CAAAACTCATTGGTGTAAAAAAATCTCAAGGGTGGTAAAAGGAAGAAGTA
AGGTGTTGGTGTTTTAGTGAATCACCCCAACCATAGTATAAGAAAGCCGC
GGCTGGAATGGTAACATCTGAACTTCTGTTGTTCTATCTCTGTCGTATTT
GATGACTATTTTTTGATTAAGAGATCAGTAATGTAGCATCTTTAATGGTA
AATTTTATTGGTTTGTCGTTAATACTTACTTTTCAGTGTGTTTTAGACAT
TAATGATATGCCCTTGATAATACACTTGCATTATAAAATCATTGTAAAGG
AAAGATCAACAATAAGAAATTTAAACAAGCACAAATGGCTGGGCTGAAAG
AACTAAAAAATAAACAAAGTGCCTCGAATGCCTTCGCAATATTTCACTGA
AATCTTTTTAGAAATCAATTAAAAAGTACATCTAGATAATACTGTGAAAG
TTTCAAGCCAGCACCTTCAAAATTTATCATTCAAACTGACAAGAAAGTTG
TCATCTTGAATATAGTTCTTATAATTTCAATTTTGGCAAAAAACTATTGT
TTCCACAAAATACCCCTAAAATATGTCCAAAATTAGTTCAAGTGTTCTAT
TGGGTACAGAGTCAAAGATATCTAGCAACAAAAAAACTTTTTGTAAAAGA
AAGTAAGAGAAAAATTTCAAAAGCTATCTACCAGTGGATACCCCTTAAAA
CCACATACCCCTTAAAACCCACAATGTTGCATTTTTGGCTTTCATAACTA
CCAGATTTAATTTTATGTGGTATGTTTCACTTTTTTACAACCTCTTATAA
ATGTTCTTTCATAAAATACCAAATTTTAAGGATTTCAAAGATGCTAAAGT
ATCTTAAAATTCGAAGTTATTCAAAATTTTATCAAAAATCCCTTCAAAAA
ATCAGGTTTTTTGGACCTAGAAATTACACAATTGAATTTAAGGTCATAAA
ACCTATACTTTTTAGATACCTATACTTATGGTAGGTATGAAAAAATCATT
TTCATCTTCGTGAATAGACCCCAACAACGAAAATGACAGGCCCTTAAAGT
TCTACTTTAAAGCACTTTTATGGTGATGATCAATAAAATCTGAAAATCGA
CTTTCTCAAAACCTGGTCATGTTGCATACCAAAATGTCACAAATTTGATG
GAGATTTAGAAAAACATTAGAACCATAGGTCAAAAATGAAGCGAATGAAG
GTTTTGGCCTTTCGTAGCCGTTTTTGACGAAAAAGCCACACACAATTGCA
TTATGGGCATGAAATCCTGAAAAATGAAAATATTGTTGTGGGAATGAATT
TCTAGCAAGTCTTTGAACCATTGAATCACGAAGCAACACCAAATTTGTAT
CCATCAGCTTGAGTATCCCGTTAGCAAGGGTCGGACTTTGTGGTTTTTTC
CTTATTTTTGTAGGTTTTAAGGGGTATTTTGATTTTAACACATATTTTTG
AGATCATTTAGGTACTAATGGTATATTCATAACATTAGTAACTTTACAGT
GAATCACTGTTCAAAATTTGAGGTCAAAAGAACTTTTTTGTAAAAAGTTA
TTCGAGAAAAACCATTTTGTAGGTTTTAAGGGGTAAATAGCTAAAACTGC
ACTTTTTCACTTCCTCGTGAAAAACTGAAAACTGTTTTCTACAAAACATC
ACTGCTAGGGAAGACAATCATAGACAACGTACTTTCAACACAAAAAGTTT
CAGCCTTACACTCCAACTAAACAATGAGATAGAGGGTACCACTTTTTATT
GTGGGTTTTAAGGGGTATCCACTGGTACCAATGATAAACTGAGCATCTTG
ATGTTCTTATAAAGCTCGGAGACAGAGATGGAACAGCAATTAACTGAAAA
GACAATGCGGTAGATATTCCAGCCGCGGCTTTCTTATACTATGCCCCAAC
CAATCCAAAAAGAGAATTTCGAATAAAGTTCTTATTGCCTAAAATAAGCA
TTTCGCAAAGAATAGACCTTTTCATAAATTACGTCACGAACATCACTTGC
CTCGTATTCAAATAATTACCATGGTGATTATGTCCCTTGAGACATTAAAT
GATTTTTTTATGAATAGGAAGTAGTTCTAATAAAATCCACTGGGAGTTAA
TCACCATGGCATTAATTTCAAAACGAGGCAAGTGATGTTCGTGACGTAAT
TTATGAAAAGGTCTATTGGTAGTTAATTTCTAAAATCAAAAAAAAGTTAA
TTTTGACAAGAACTTATTTTGGCGAGGCAACAATTAATAGTTTTGGCGAT
AGAATTCGTCGAATTGCTTAAAATTCAATAAACAACAATATTTGAAAAAA
AGCAAAAACCACAGCTTTGAATCTTTAGTTTTCTGATGAAATACGATATA
ATATCTTTCTAGGTGTCATTGTATGTGGGCGAGCAGCGTTTGCAGAAATA
TGTGACGAAACAAACCAAGCTATTGGAGTATCTTTGGTATTTGCAGCATG
GAATTCAGCAATCGTTTTTGGCCCTGCCGTTGGAGGCACGTTATGTTCTT
GTTCTAGGAATATTTTTTTTTGGGGGGGGGGCACTAGTGTTGGCGGATGA
GGGGTATGTACGGATGGGACCTCCAAAGGCAAAGACCGACCTTTAGAGAG
ACTTTTTTGAAAAATGTTCTTCGATTTTTGAAAAACTCCCTACTCTTAGA
GAGACTTTTTCAAAATATTTTTCTAAAAACTTTTGATTTTTACGAGCCTT
AGAGAGTATTTTGAAGGGTGAAAAACCGACTCTTACCGTCATACCTAGCA
CCCATTTTTGCTTAAGTACCCCCCCCCGAGGAACATTTAGGTGATTAACA
TGTGTTTTATTTTGGTTCGGTGAACCACTACTTTCGTCAACTAAATATGA
CACAAAAATCAAAATTCATACTCTCACCATTCTCATACTTTTCAGGATTT
TTAGCCGAGCCAGTAAAGAAATACCCATCAACCTTCAAA Coding sequence (CDS) from alignment at sc0000023_pilon:1781345..1784983- >XLOC_039663 ID=XLOC_039663|Name=XLOC_039663|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=756bp|location=Sequence derived from alignment at sc0000023_pilon:1781345..1784983- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGGTTTTTATGCTGGAATAATTGCATCATCATTGTTTGTTGGTCGATT
TTTTGGAGGATAGGTTTTTATGCTGGAATAATTGCATCATCATTGTTTGT
TGGTCGATTTTTTGGAGGATACTTTTGGGGTTGGCTGACAGACAAGATTG
GTCGACGTCCAGTTCTTCTCCTCTCCTCGACTCTGGTGTTATTGGCAACC
CTTGCGTTTGGATTCTCGACCACCTTTGAAGTTGCAGTGCTGACCAGGTT
TCTTCAAGGATTATTCAATGATACTTTTGGGGTTGGCTGACAGACAAGAT
TGGTCGACGTCCAGTTCTTCTCCTCTCCTCGACTCTGGTGTTATTGGCAA
CCCTTGCGTTTGGATTCTCGACCACCTTTGAAGTTGCAGTGCTGACCAGG
TTTCTTCAAGGATTATTCAATGGTGTCATTGTATGTGGGCGAGCAGCGTT
TGCAGAAATATGTGACGAAACAAACCAAGCTATTGGAGTATCTTTGGTAT
TTGCAGCATGGAATTCAGCAATCGTTTTTGGCCCTGCCGTTGGAGGTGTC
ATTGTATGTGGGCGAGCAGCGTTTGCAGAAATATGTGACGAAACAAACCA
AGCTATTGGAGTATCTTTGGTATTTGCAGCATGGAATTCAGCAATCGTTT
TTGGCCCTGCCGTTGGAGGATTTTTAGCCGAGCCAGTAAAGAAATACCCA
TCAACCTTCAAAGATTTTTAGCCGAGCCAGTAAAGAAATACCCATCAACC
TTCAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1781345..1784983 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 337-378:43 |
| Aaloc | 214-333:576 |
| Aaloc | 61-210:3195 |
| Aaloc | 1-57:3640 |
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