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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1774571..1779182- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039662 ID=XLOC_039662|Name=XLOC_039662|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4612bp|location=Sequence derived from alignment at sc0000023_pilon:1774571..1779182- (Clytia hemisphaerica_ch_hm2_pilon)
ATACCACTCCTAAGCCATCAAAAGAATACTTCACCAGAATCAACATCACC
AAACGAGGAGAGCAGATTTTACATCGAAGACCAACAGATACGAGTGTCCT
ATATCATCAAACAAGAAGAGGATGGATGTTTCAAGAAATTATGTTCCAAA
ATTAAGAAATGGTCTTTATACGAGCTGATAACGTAAGTTAACTTCCCTGC
ACTTTCAACCCAGTATGATTCAAACAAAACTTATGTTAGGTGGATAGAAG
TATAATTATTTCCAAAACTTCTTTCAAGATTTTCAAATCATTTAGCAAAA
TACTTTATGACTTTTTGAGGAATTTTTGTGATTTTGGAAGCACTAACACA
GAATTGATTGCCTCTTTAATAGTGGCCGGGTAGCTCAGTCGATAGAGCAT
TCGCCTTACAATCTAAGGGGTGTGGGTTCGATCCCCGGTCACTGCCAACT
CAGCGGATGAGTAGCTTAGATTGGGTAATCTGATGTAGGCGGTAAATTAC
TGGGAGATGAGAGTAGGTGTGGCGCTCCACCTCAGCATTCGATATCCTAG
GTCTAGCGCAAATAGAAAAGGGGATAGACTACCTCACTCACGGCTCCGCC
GACAGCCACCAGATGAATATACTTAACTTATTAGTAACTCCGCCGTCTTC
AAAATCGTAGATACATGAACTCGCTAATTCTAATACAGTATCATGGATTC
TTTATTTCAATTTTTATAGAGATAAAACAGTGATGTTGGTGACAATGATG
TTTGGTATGTCAGGATTTTGTATCATTGGATTTTCAGAACTCTCTTCACT
ATGGATGGCCACTAACTCAAAATATGGTAAGTAATGTAAAATTCTTCAAC
TTCTAAGTTTTTCTTTATCTCTAGGCTAAATTTAACGTTCATTTTATGGC
ATTAAGTCCTGTCCCCTTTTAGTAAACTAGTAAACTAGTAAACCACGTTG
TCGTATTTTGCTGCAGATTAAACTTGCAATATGTTTATGTTCACTGAATA
CCACTTTCCAAATCACTCTCCCGCAGCATTTTCTATTTTTTATAAGAACT
CTTTTTTATAAACACTATTCCTGCGTTTCTGTGTCCAAGGGAAGACAGAC
GCTTGCTAGTATAGTCCCCTTTTTAAGTTGCTTCCAAATAAAAGCATTTT
AAGATTTCCGAAATTTTTTAATTTTTTTTCATTCCTCTTATTTCAGGTGG
TTTGAATTTTTCAACAGATAAGATTGGGACAGCACTTCTTGTACCTGCGA
TTGTTTCAGTCATCATACAACCCATTGTTTTTGGAAGGGTGAGTATTCTT
ACCGGAACTATTATTATCCGTAGCTTCCTACTTTCTTTATTCAGTGATAT
TCCACTCTTAAATATCATTTCAACGAGCCCAAAACCACCATTTTATTTAA
ATTCAATCAAGAAATACAACCTTTTCGATTCCGCTACAGATTATTTTGAC
ACAGACTTTGATTCTCTGTATATCGACACTTATGTCACAAATTATCTTGT
TTTATTTCTTGCTTATAGTTTGAAAAAAGATTTGGTGGAATAAAGGTAAG
AACGAGATACTATTTATATTGGCCATTTCACAGTCGCAAAGCGTAATGGG
TAATCAGGACCACTATGCGCTTATGACGACTTGGTACAAAGTTTTGATAA
ATTTTGAATTTTTTTGCGTCTAACCAACGGGAAACCGTTATCGGGGCACA
ATCAGTCCTGATTACCCATGATTCATTTCGACTGCGAAATAGCCTATAGT
CTATCGATTTCAGACCCGGGGGGGGGCCAGCTGCAAAAGGACCGACGGTA
TGGTGCGGGTCCTAAGGGAACCTTTTCCAATATTAAAAATGCACTGAGGT
CGGAAAAACTAGAGATCACTGTAAGGGTAGAAATTTCAGAAAATTCTTGA
AAAACCTAGATATTTTGACCAAAAATGCTAGAATTTTGACCATTTTTTGC
ACGAAAAGGATCGAAAATTTGGGGGAAAATGCACTCTAAGGGTATGATTT
TCACTGATTTTTGCTGCACTGTAAGGGTGCAATTTTAAAAGCCAATTTTT
GGCCCGCACATACCGTCAGTCCGCAAACCCAGTGCCCCCCCCGGGATTTC
AGATCCATGTAATCTTATAAAGCGATTATAAACAGTTACGTAGAAAGTGT
ACAAAGAACTTGTTTTTAGAAAGAAACCAAGTCTAGGGACCGTAGTGCAG
TGGTAGAGCATCCGGCTACGGTTCACAAGGTTGAGGGTTCAACCCCCGTT
TGGGTCATACCAAAGATTCCCAAAACGGTACTTGATGCCTCTCTGCTTGA
TGCTGAGCAATTAAGAGAAGGATCAAGGGTAAGTGGAGAAATCCAGCGAG
AAAGAGTGGCGCCTTCCCCTACCCTTCGGGTCGCCTCCGACTGCGGTCGC
GGACTTACTTAAGTCTAAGATGAACATGTAAACCATATCTAATACGAAAA
TATTATTTTCTTTTAGACATTGCAATTATCTCTATTGATATTGGCCATCT
TCACTTTCTTCTTCCCTTTCATACACTACACTATCAAAAGGTATACCAAA
ATAAACCCATCTTTAGGTCTTTATTCACGGAAGAAATGCTGAATTTAGTT
TCAATCGTTTGGGACCGTGGTAAATAGCAAAGCAAATCAATTACAATAAA
CTCTTGCTTATTCAAACGTCTATTATTTGAATCTTTCTATAATTTGAATT
TATTCCCAATCCCGTTAAGGGGAAACCCTCTTAATATGATTTCTATGATT
CAAATCTCTCTGTAATTCGAACAAACAAGATTCGCCGTTCGAGTTCGAAT
TAGCAAGAGTTAACTAGCCTCATCTTTTTGGACCCTGAAAGTTTTGTGAA
GAACTACTACAGAAGGGGTAGAGTGGTGTTAGGGGTAGGAAAAGGGCATT
AGCATAGCCCAGGTTATATTAGAGATTTGGGAGAAGCTATTTTTGTGAGT
GACGCAATTTTCACAAGCCAGCAACTTATAAAATCTTTGGCAAACTGAAA
AGGTGTTTAACTACTGTTGTAAAATCTCGTGGAAATTATAAAAAATCCAT
TAGACAGGGCTGGTCAAGTTTTTTTTCAAACATTAACATACTTTGAAACT
TTAAAATCAATTATTGAGGCACCCAAAACGGATTTCGTGATTACGTGATT
TGGAAATTTTTTTCTTCGTGATTGCGTGATAAAAGGTCAAAACTTGATGG
TTATTTGAAAGGTTTTTGAGCCATCATGCGTGATTTTTTGCTGATTTGCG
TGATCACGAAGACAAAAAATTACGTGATATCGTGATCAGAGTTACCACTG
GGGGCCTTATTATTCCTATAAATTAAGCCAATAAATTCATTGATTTTAAA
GCCGAAAACTACTTTGGTCATTACTCATAACCACTGGCATGGTCCGAATG
ATTGCAGACATAAGCAGCCGTTCAGCTTTAGCACTTTTCATCAACAATTC
TGTCTACCCTGAACAAGCTGGCCGTGTTAATGGATTTGCTTTCTCTGTTC
AAGAAATTATGAGGTATGATTCAGATCATTTAATACATAATATACATTAG
CCTGGATATCTAACCTGTATATTTTGATGTTTCTGCTATTTACAGCTTGG
TCTACCTACATGCTGGTAAACCTAGGGTTGGTAATTTTGATTTGGTTCTT
CCAGAAAATGTTCGATTTTTGATTTTCGTGAATTTTGGACCCTTATAGAG
ACTCGATTTGCTTTTAATTGGTTTTATACCTCTTTGAGAGACTTTCGAGA
GTGTAAAAAGGGACCCTTATGACCCTAATTTCCGGCACCGAACTATGGCT
ACTTATTAAAAATGGCGTAATATTTTTTTTCAGCTAGGGACGAAGATACT
CCAACTAGTTTTTTATACAAATAATATATTTTGTGGTGAAAAATTTCTCT
GGAGTGGCCAAGGCAAATATGGCGCCCTTCTGAAAGATTTTTTGTTTTTG
GCGCCCCTCTCTATACGCTCATTTTACTTACGAATACAAAAAACTAAATC
ATAAACACAAACAAGGGAGTGTGCGAGCGAAGTGAGCCAGAAAATTTTGA
GTTTTTGAGGTGATGAGGGGCGCCATCTTTGTTTTTTCATTTGTCAATCT
TTCGATATGGGCGCCTGAAAAATCCTTCTTGACGCCCCTTATTTTTGGGT
GCCCCTTCTCAAAAGGCTCTGCTGGGGGGGCCTGGACCCCCTGCCACCAC
GCGACCGTTTGTGGTGAGTTAGGTTGAGGGAGAGGTGCTGTAGGTTTTAA
GAGTTACATAATGCATTGAATCGAAAGAAAAAAGAAATGAATCTAAAGTG
TGCATTTTGAAGCAAAAATTTGTCTCATTCTTATCTTTCAGAGTTGCATC
ACCGACAATGTTCGGTGCATTATTTTCATGGGCCATCGATTCTCAACAAC
ACCAAATCATCTTCCCAATCGATTACAGACTTCCGTTTCTAATTATCGCT
ATTGTTATATTCGGTATATTAGTATTGACATTGTTATTACCGTTAAGCAT
CAATGCAGCAAAAGCAGTCAAAGATTCACCAGAGTCGTTGAGACCTACCG
AAGTCGGAAATATATCAACAGCTTCCGCATCATCTAGCTTTATGGAACAC
AATAGGACTTGA Coding sequence (CDS) from alignment at sc0000023_pilon:1774571..1779182- >XLOC_039662 ID=XLOC_039662|Name=XLOC_039662|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1830bp|location=Sequence derived from alignment at sc0000023_pilon:1774571..1779182- (Clytia hemisphaerica_ch_hm2_pilon)
ATACCACTCCTAAGCCATCAAAAGAATACTTCACCAGAATCAACATCACC
AAACGAGGAGAGCAGATTTTACATCGAAGACCAACAGATACGAGTGTCCT
ATATCATCAAACAAGAAGAGGATGGATGTTTCAAGAAATTATGTTCCAAA
ATTAAGAAATGGTCTTTATACGAGCTGATAACATACCACTCCTAAGCCAT
CAAAAGAATACTTCACCAGAATCAACATCACCAAACGAGGAGAGCAGATT
TTACATCGAAGACCAACAGATACGAGTGTCCTATATCATCAAACAAGAAG
AGGATGGATGTTTCAAGAAATTATGTTCCAAAATTAAGAAATGGTCTTTA
TACGAGCTGATAACAGATAAAACAGTGATGTTGGTGACAATGATGTTTGG
TATGTCAGGATTTTGTATCATTGGATTTTCAGAACTCTCTTCACTATGGA
TGGCCACTAACTCAAAATATGAGATAAAACAGTGATGTTGGTGACAATGA
TGTTTGGTATGTCAGGATTTTGTATCATTGGATTTTCAGAACTCTCTTCA
CTATGGATGGCCACTAACTCAAAATATGGTGGTTTGAATTTTTCAACAGA
TAAGATTGGGACAGCACTTCTTGTACCTGCGATTGTTTCAGTCATCATAC
AACCCATTGTTTTTGGAAGGGTGGTTTGAATTTTTCAACAGATAAGATTG
GGACAGCACTTCTTGTACCTGCGATTGTTTCAGTCATCATACAACCCATT
GTTTTTGGAAGGTTTGAAAAAAGATTTGGTGGAATAAAGTTTGAAAAAAG
ATTTGGTGGAATAAAGACATTGCAATTATCTCTATTGATATTGGCCATCT
TCACTTTCTTCTTCCCTTTCATACACTACACTATCAAAAGACATTGCAAT
TATCTCTATTGATATTGGCCATCTTCACTTTCTTCTTCCCTTTCATACAC
TACACTATCAAAAGCCGAAAACTACTTTGGTCATTACTCATAACCACTGG
CATGGTCCGAATGATTGCAGACATAAGCAGCCGTTCAGCTTTAGCACTTT
TCATCAACAATTCTGTCTACCCTGAACAAGCTGGCCGTGTTAATGGATTT
GCTTTCTCTGTTCAAGAAATTATGAGCCGAAAACTACTTTGGTCATTACT
CATAACCACTGGCATGGTCCGAATGATTGCAGACATAAGCAGCCGTTCAG
CTTTAGCACTTTTCATCAACAATTCTGTCTACCCTGAACAAGCTGGCCGT
GTTAATGGATTTGCTTTCTCTGTTCAAGAAATTATGAGAGTTGCATCACC
GACAATGTTCGGTGCATTATTTTCATGGGCCATCGATTCTCAACAACACC
AAATCATCTTCCCAATCGATTACAGACTTCCGTTTCTAATTATCGCTATT
GTTATATTCGGTATATTAGTATTGACATTGTTATTACCGTTAAGCATCAA
TGCAGCAAAAGCAGTCAAAGATTCACCAGAGTCGTTGAGACCTACCGAAG
TCGGAAATATATCAACAGCTTCCGCATCATCTAGCTTTATGGAACACAAT
AGGACTTGAAGTTGCATCACCGACAATGTTCGGTGCATTATTTTCATGGG
CCATCGATTCTCAACAACACCAAATCATCTTCCCAATCGATTACAGACTT
CCGTTTCTAATTATCGCTATTGTTATATTCGGTATATTAGTATTGACATT
GTTATTACCGTTAAGCATCAATGCAGCAAAAGCAGTCAAAGATTCACCAG
AGTCGTTGAGACCTACCGAAGTCGGAAATATATCAACAGCTTCCGCATCA
TCTAGCTTTATGGAACACAATAGGACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1774571..1779182 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 646-915:271 |
| Aaloc | 484-642:1261 |
| Aaloc | 409-480:2147 |
| Aaloc | 382-408:3095 |
| Aaloc | 292-381:3415 |
| Aaloc | 184-288:3893 |
| Aaloc | 1-180:4613 |
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