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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1620854..1627600- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039657 ID=XLOC_039657|Name=XLOC_039657|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6747bp|location=Sequence derived from alignment at sc0000023_pilon:1620854..1627600- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCCTTTCGAGACGTCAAGTTTTTCATCATTGATTGAACGCGAAGA
GAGAGAAGAAGTCATCCAATTAGATCTTCACACAGCTGCTCTCATCGGTG
ATTATGATATGGTGAGAGGTATGGAAGAGTTTAGTTTTATTCAAAAGGGT
TTGAGATATATCTTTTTGGATCAAACCTCACAAATTCTTTTCCCCAACTA
TTTTCCAAAGCCGAAATATTCAATAGTATAACTTTTTAACTTTTAGTAAG
ATAACATTAGAATTGTAAGTACCGTGTAAGAACCTATTTTCAGAAATTTG
ATATTGGGGTATCTCGACTCGAAAATAGTTAGGCAAATACTGGATTGTTT
TACTTTTACTTAAGACAACGGTAGAAGGTTTCTGCAGGCCAAATATCTCA
AACCATCTAACTACCCCTTAAACATTCGCCAAAATCTTTCGTATCGCAAT
CAGTACTTTGAGTTACTACCTCCTTACACATTAGGGTTCCAAACTAGGAA
GGAATTCCAAAGTTAGGGCTGCTGAAGATAACTCAGAATCGCCCATAGTG
TCCTCCCCCCCCCCTTTATAAAGGGGGGGATTCTGATTTTGGCCCTTTTT
TTAAAGTATGGGGGAAAATGAAAAATTTGAAATTTGCTGGGGGAAAATAA
AGAGGGGGAAAACCATAAATTTAGGAGATTTTGACTGGGGGAACTTCACT
GATCTCAAGGTGATCTTGTTGCAAAACCTGTTTAAGCAATAAAATCAGCA
AATCTTTTGGGATAAACCAACTTTTCAATACAAGTTCATTTTTCCAGCAC
TTTCAAGGCTATTTTTTCAAGATTTCCAAAATTTCAAACTTGATTTAAGG
CATTTTTATGTTAACCATATGGGGAACCGCAAAATCTTCAAATAGCTGGG
GGAATTCAAAAAAGAGGGGGGAACCGAAAAATTTTGAAATATGGTGGGGG
AAATAAAGAGGGGGGAATGGAGAAAAATTTTGATTTTTAGTGGGGGGAAC
CAACCCAGGAGGACACTATGTCGCCCCAACTCGGGAAGTCTTTCATAGCC
TGGGACAACATAGAAAGCAGACACAAAAAACAAGGGTTTTCCAAAGTGGC
AGACGACTATACTAAATTTATGTCAGCCTTTTTACTGAAATAACTATGGA
TTTTTCATTCCAGAATTTAAATGAAAGAATATTTTGAGATTTGGAATGAG
CTTATTTCAAGAGATCTTCTCAACTTCACATAGTGTTATTCCAAGACCTC
TATAATCTCTCTCGTTTGAGGATGAGCAGAAGTCTAAGCTAAAATCTAAT
AATGTTTTCTGTGTTTTAATAAAATTTCCTTGGTGTATGTGTAACCATAA
ACGCTTTATGCAACCTGGATACAAAATTAAAAATCATGTTCCGGCATTCC
ATTTTTTAGCTGAATCACTTAATTGTTTTCACTATTTTACCAGTATTAAT
AATAATCCACAAGGCATCCCTCCTATAAAATCACTGTAGTAACTTACTCT
TAAATTTAACTAATCTTACATTAGACTGCATCCACAAGAAGAGTGATTTG
GACCACACCAACCGTGGTGGTTGGACTCCTCTCATGTATGCTGCATACGT
TGGTCGTGATAACATTCTCAACATGTTACTCGATGCTGGAGCTCGTATTG
ACATCCAATCAAAAAGTGTGAAATTGGGTAGCACTGCTCTTATGTTGGCT
TCCTATTGTGCTACAGAATCAATCATGTATTTCTTACTACAGGTAGGATT
TTTTTGTTAAAGGGATAATCAGATGGTCTGAGATATTTTGCCTGCAGATA
GCTTCTAGGATTTTAGGAGAAACCTCTAAATTTTTCGGTGTACTTATTTT
CCTAACTCAAGTTATGCCACTTTGAAATTTTGTCCCTGAAAAGTCCCATT
TTTCGAGATTTCAAATTAGCATAACTTGAGTTAGGAAAATAAGTACACCG
AAAAATTTAGAGGTTTCTCCTAAAATCCTAGAAGCTATCTGCAGGCAAAA
TATCTCAGACCATCTGATTATCCCTTTAAACTCAATTCTTCACTCCTCTT
TATCGTTCAGGTTTATTAAGCCCCTTATGGTGGGCTTTTCCAGAAAACAA
TTTGATACGGGGGTGGAGGATATAACATTTCTGGGAAATTTACCCACTAA
ACGTTGTGATTTTTGACCCCCGGACAGCAGGTCTAACTCCCTGGACAAGC
ATCAGTTGACCCCCTGGACATCAAAATTACCCTAAAACAGAGAAAAATTA
CACCCAAAAAAGAGAAAATTTAACCCCCCCCCCCGGACAAGGCAAATTTT
GGAGATTTTTCACTACCCCCGGACACTATATCCTCCACCCCCCATGTACG
GGCATTTTATGGAAGAGCCCAGTTCATTAAAAAATCATAGACAAAATCGT
TTGGTTCATAACAAAGATTAAAAAGGCAATACCTAGAAAAGAGGTTCAAG
CTAACGATCGTAGGAGCGAACCTCAAGGGTAAATTTTCAGACCCTCGTAA
GGTGCATTGAGACCGTAGCAACCGTACTTCGGGGGTTCATTTTGCTGCGG
AGAAAAGTTTGACGGGTTAGCGAGCGCCTCGCCAAAAACCGGGATTTTGC
TACTACAAGAGCTTCGAAAGTTTAAAGTGACGTAAAAAAGTCCTTCGAAA
AGTGAAAAGGATAAAATAGTCTTCCCATTATTTTACTTTCCAACTTTTTA
GCACGGTGCATCGATCAATCTTCGAGATGGCGAAGGAATGACTAGTTTGT
TTCATGCAGTGCGTCAAGGTCACCAATCTGCTGTCAAATTACTGGCATCC
AAAGGAGCTGATCTAGACCTTGGGTAAGTCAAATAAATACATGCTTTTTC
TTATAAGAATGGTGTTTTTTCATTTCATCATGGGTATTCTTAATTTTTTG
GGAAAAATCCTAAAATATTCTTACGGTTTTCTTTTGGGTAGAATCGAAAT
TTAAACTAAGTTTAATAAGAAAATACATTTCTGAAGCATAAAATGGCATT
TTTGTCAAGGTATTAAACCTGGGATAGTTGGTAATTCAAAGTTAAAAAAT
TGTTCTTTAAATGCCATTCTGAGGGTTTGTTGCCAAGTTTCATGATGATG
ATATTATAAAGTACATTCTTACAAAAAATACGTGTATGTTTACAATTAGT
ATGCTGATAAAATAGTTACTTCTAAATTTTACCCACGAAAAAGATTTTTT
CTATTACTTTACTGACGATCTTATTACGAAGTACCTTTCAATTACACACC
CCGCTTCATCCCTTTCCACTGGAAAAATTGGTCAAAATATCGTCCCCAGT
TGAAAAACTCTAATTTTTATCAGATATGAAGGTCCTCACTGCAAAATGTT
ATGCTATTTTTCTCATCCCCATTGACTTTTTTGACTTGAAAACAAAAGAA
TTGAAATCCCCAGCCATAAAAAATATCAATCGCCATCAAGTTTTGGTCCG
TTATTTTTATCCCACTGACTGATAAATTCCCACCGGAATTTACTTCAACG
CTCTTACTTGGGTAACGTTATTTGAACCTCTTTTATTTGAACCTTTTTGT
ATCCATGTCATGAACTAAAATATTGTTCCCTTAACTGGATAGCCTTTAAT
ACGGCTTTAAATATACTCTCCGTATTATGAATTTATCATTAATTCGAAAA
AATTATTGAGTCCCTTCAAGATAGAATTAGAGATAATCAACACTGTAAGT
GTCATTTCTTTCTCATTTTGTAGGCAATACTTGACGGAGATCACGCTAAT
ACACGCTTTTTTTTTATAAGAATGGTGTAAATCCATTTCATCATGTATAT
TCTTAACTTTTTTGGGAAAATCATCCTAAAATATTCTTACAGCATTCTTA
GGTTAGGATCCTAATTGACTAAAAAATGGTCTAAAAATGGCATTCTTAGC
TCGAGTAGCAAAATTCTATGATGGTGATATTCTTCACATTTTTTGGCCAT
TTTCATCATGGACATTCTTTAAAGTGTATTCTTATTAAAAAAAAGCGTGT
AATGCTAATGGAGATAAGAACTCCTATAGATGTGATGTTTCTTATTGAAT
CGTTTGTAATGATGAAATTTAATATTATTTCCTTTCATTTTGCAGGCAAT
ACTTGACTGGGATCACACCAATCATGGAAGCAGCTATATCCGGACACGAA
CTCATCTTCAATATTTTACTAGACCATGTAAGTCTCCTATATGTTATCAT
CGTGACTTTTTTTCCAGCTCCATCACTCACTTGATTCGATTACTAACTGA
AATTAGTAAAATTTCGGAATTCCAGAGGGGTATGATCCTAAAATTGCCTG
GAATTCCAAGGGGGTAGGTCACAAAAGGTTGGACCTTCTCAACAGGGGGT
GTACGGTTTTTTCCTGGAAAAGTCTATTTTTAGGCGAGAAAGATTTTTCA
TTTGCTAAGACCTATTTTCGCCTTGTCTTTATTTGAATCATTGAATCATT
GCGTCAGAAGAAGGCATCACAATTGCTTTGAGAGTTGACTTTCTGACTCC
TTTCGTTAAAAATGCGAGAGTGTAAAGCCAAAAGTTTAACAATTCAAATA
AGAGTCTATGGCTGTTTGGAATATTTCATACATTGGTGAAAATTAATTTC
ATTATGTTACTACAATCACCAGGGTGCAGACATAACAAGGAGAACGAAAA
AAGGAGAAACAGTCAAGAGTTTGGCCATGCGTCATAAGAATACATCTATA
GTTGCACTGATTGATAAACACATTTCACCTCAAGAACCTACCAGAAAGGA
ACCAAGTAAGAATCAGTGTTGTAATTTTTCCTTTGTATTTTCAAATTTTC
GAAGTTCAATTGCGGAGGAAGGTAGAGGCTTTAAATCCATTTTACAGGAT
GACGGGGGGGGTGCCCGGCCTTCGACCCTCTGAACGGGGACTAAAAAGGA
GGGAAAATTGGAAAAAGTTGTGAATTTTACGACCCCTATGGGACTAATTT
GTCCAAATTTCGATGTTTTTAAGGGCAAAAAATTTAAATTTTCTTATTTT
TCCGACCTTGAATGCGATTGAAATTTAATTTTCTGATTTTTTTTAACCCT
TACGGGCACTTGACTAAGTACCCCCCCCCCCGCAATAATAAGTTGAGGTC
CCTAATAAGGTCCTGGGTACTGCACCATGTCAACCAAATTACTCATCAAA
CACAAAGCCTTTTTATAGCGCCCGTACAGATTCATAAATTCCGGCTACAA
CACTGAAAAACTCCGTGATCTAGTTTGATATCTATCACTGTGAAGGTGTT
TGCGATGCAAGATCAATCCTAGACTAGAGTTTACTTCTGACTAAATTTTG
CTTTTTGATAACTTTTTGACGCCGAGTCCAGTCCGACTGAGCAAAGGCAG
AAAATTACCATATACTACCGGGCCACTAAATCGTATTAGGATTAAATAAT
AATAGGATTGCCATCCAGTCTATAAAAAAAGCTTTAAGTGGACCCCGGGC
TAGGTCAATCCTCCATAGATCAACTAAAACAGAACCTCGGCAAAAGTTTT
TTGCCAATCGCGAAAATTTAATCTTCAAATACAAATTTTTTGAACAACCA
TTAGCTCTTTGGAAATTACTCCTGCGGCGTTGAGATAATTTCAAAATAAC
TTTTTATTTCGTTTCCCTTATCAGCATTGGAGTTACACGACCAATTCGGT
GCATCCATCTCATCCTCTGGTGTCATAGAAGGGAGCATCCAAGATGGACC
TGCCATTATTGATTCACTTATGAGAAATGCTGCCAAGTAAGATTGTTTGT
TTTTACGAAAATTTGAAAACCAAAATTGGAAGAGTTTTTTCAGATAGATC
ATGCAAAATACCTCCGAAACTAGGAGACCATGTCATAGACTTCCGTATCG
TTCCGAAACGAAAGGGTTCCGAAACTGCAGTGGTGTGACCGTTAAAATTC
GAAACTTCGAAAAAGAAGACGTTACAAAGTAAAACAGATCAAAACGGCTT
TGCTCCACTATTTTCATCGGAAAAATTGCTCCGAAACGTTTCGAAACCAA
TATGAACACTCTCGATCCGTAACAGAAACCATACCGGCACGATACGAAAC
CGTAACGTCTGAACATGGCCTGATTTCCCCTGACTTGCTGCGTATAGCTT
ACTAGATAAAAATCGGACTAAATCTCCGACCATGTTCATAGTTAACGGCT
CTGCTTCGATCCAAAACGAAATGAAGCCGTTCTACTGGTTAGAAGTGACG
TAAAGATTGAACTTAACCAATGGAATGGCTTCATTTCATTTCCGAGCGAA
ATGGAACCATAGTGTGTGAACCACAGATATCTTATATAAAACACTAGATG
GAAGCCTAGTTGAAGCAAAATAATTCGCTATCTTGAATGAATTTTGAAGT
CATTGCAGTGTCAAAAAAGTTTCAACAGTGAAAAACCAAGTTTTCAACTG
CGACCTACTGTGGCCTACCTTCAGCAAAGATGGCGGATTATTTTGCTTCT
CCTGTCGTTGCTTGGGAAATGCAGAGTAGCTCTATTTAGTGTTTATATAA
AATATCTGTGATGTGAACGTGGTCTCAGAGAGTAATGAAACGGAGAACTT
TAACATGAATTATTGATATACATTCTTGATTGACTTCTTCGTATTTCCTT
ATTTTTAGTTCGGCGAGAAATCCAGATTTTTCTGAAGGAGCACCCGTGGC
ATCACTTTGTCCAGAAATACAAAACAAACTCTCCATCCAAGGTCAAGGAG
GTCCTCCACCGCAAATTAATAACCCCGTATTTCAAAATGGTATTTAA Coding sequence (CDS) from alignment at sc0000023_pilon:1620854..1627600- >XLOC_039657 ID=XLOC_039657|Name=XLOC_039657|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1848bp|location=Sequence derived from alignment at sc0000023_pilon:1620854..1627600- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCCTTTCGAGACGTCAAGTTTTTCATCATTGATTGAACGCGAAGA
GAGAGAAGAAGTCATCCAATTAGATCTTCACACAGCTGCTCTCATCGGTG
ATTATGATATGGTGAGAGATGGATCCTTTCGAGACGTCAAGTTTTTCATC
ATTGATTGAACGCGAAGAGAGAGAAGAAGTCATCCAATTAGATCTTCACA
CAGCTGCTCTCATCGGTGATTATGATATGGTGAGAGACTGCATCCACAAG
AAGAGTGATTTGGACCACACCAACCGTGGTGGTTGGACTCCTCTCATGTA
TGCTGCATACGTTGGTCGTGATAACATTCTCAACATGTTACTCGATGCTG
GAGCTCGTATTGACATCCAATCAAAAAGTGTGAAATTGGGTAGCACTGCT
CTTATGTTGGCTTCCTATTGTGCTACAGAATCAATCATGTATTTCTTACT
ACAGACTGCATCCACAAGAAGAGTGATTTGGACCACACCAACCGTGGTGG
TTGGACTCCTCTCATGTATGCTGCATACGTTGGTCGTGATAACATTCTCA
ACATGTTACTCGATGCTGGAGCTCGTATTGACATCCAATCAAAAAGTGTG
AAATTGGGTAGCACTGCTCTTATGTTGGCTTCCTATTGTGCTACAGAATC
AATCATGTATTTCTTACTACAGCACGGTGCATCGATCAATCTTCGAGATG
GCGAAGGAATGACTAGTTTGTTTCATGCAGTGCGTCAAGGTCACCAATCT
GCTGTCAAATTACTGGCATCCAAAGGAGCTGATCTAGACCTTGGCACGGT
GCATCGATCAATCTTCGAGATGGCGAAGGAATGACTAGTTTGTTTCATGC
AGTGCGTCAAGGTCACCAATCTGCTGTCAAATTACTGGCATCCAAAGGAG
CTGATCTAGACCTTGGGCAATACTTGACTGGGATCACACCAATCATGGAA
GCAGCTATATCCGGACACGAACTCATCTTCAATATTTTACTAGACCATGC
AATACTTGACTGGGATCACACCAATCATGGAAGCAGCTATATCCGGACAC
GAACTCATCTTCAATATTTTACTAGACCATGGTGCAGACATAACAAGGAG
AACGAAAAAAGGAGAAACAGTCAAGAGTTTGGCCATGCGTCATAAGAATA
CATCTATAGTTGCACTGATTGATAAACACATTTCACCTCAAGAACCTACC
AGAAAGGAACCAAGGTGCAGACATAACAAGGAGAACGAAAAAAGGAGAAA
CAGTCAAGAGTTTGGCCATGCGTCATAAGAATACATCTATAGTTGCACTG
ATTGATAAACACATTTCACCTCAAGAACCTACCAGAAAGGAACCAACATT
GGAGTTACACGACCAATTCGGTGCATCCATCTCATCCTCTGGTGTCATAG
AAGGGAGCATCCAAGATGGACCTGCCATTATTGATTCACTTATGAGAAAT
GCTGCCAACATTGGAGTTACACGACCAATTCGGTGCATCCATCTCATCCT
CTGGTGTCATAGAAGGGAGCATCCAAGATGGACCTGCCATTATTGATTCA
CTTATGAGAAATGCTGCCAATTCGGCGAGAAATCCAGATTTTTCTGAAGG
AGCACCCGTGGCATCACTTTGTCCAGAAATACAAAACAAACTCTCCATCC
AAGGTCAAGGAGGTCCTCCACCGCAAATTAATAACCCCGTATTTCAAAAT
GGTATTTAATTCGGCGAGAAATCCAGATTTTTCTGAAGGAGCACCCGTGG
CATCACTTTGTCCAGAAATACAAAACAAACTCTCCATCCAAGGTCAAGGA
GGTCCTCCACCGCAAATTAATAACCCCGTATTTCAAAATGGTATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1620854..1627600 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 787-924:139 |
| Aaloc | 676-783:1122 |
| Aaloc | 541-672:2126 |
| Aaloc | 460-540:2652 |
| Aaloc | 337-456:4047 |
| Aaloc | 121-336:5222 |
| Aaloc | 1-117:6748 |
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