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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1612042..1620197- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039656 ID=XLOC_039656|Name=XLOC_039656|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8156bp|location=Sequence derived from alignment at sc0000023_pilon:1612042..1620197- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTTACCGAAGCTGGAAGGTGAAGGGTTGGATGTAGCGACATTCTT
GGAACTATGTGATAATGATTTGAAAGAATTGGGAATTGAGTAAGTTGTTG
CGCTCTCTAAGGCGGCGGTTACACAGAGCCGGGTGAAATTTTGAAAAATA
TCACCCCAGGTAGAATATCACTATGGTCTTTAAGACAACACTCTTTCTGT
ATACACATATTTAGGCGGGGTGAAATCGCTTTTTTGGCTGGGTTAATTCC
GCCCGGTCCTGAGGACCGGATTGAAATTTTTTTATGATTTTTTTTGCAAA
TTTTTGAAGATTCTTAAATGTATGCACAATTTCTTTTTTGCACCTGGAGT
GAAAATAAGTTGAAAAAAAAACTTCTTTTAATTAGTAGAGTGATCGAATT
AAGCAGTCAGCATATAGTTTAAACGTGATTGTATTTTTCATATATCCGAA
AAACGTCTTTCATGACATTCAGAATAATTTGTTCACCTTTATATCCATCC
TTGATTATTTTCCCCTTTTTGCTTTTTCAGTAAATTCGGACCACGTAAAA
AGATGTTGTTAGCAATACGTGAATGCAAGGAACGAATGGCTGTTCACGAC
CCTAACGTAAGTCTTTTCAATCTAATATCTCAAGAAAAATGTTTTCTCAT
TTCAAGACTTGATTTACGAAATGAGCTCTCTGCCGGGGCAAACAAATGCA
TTAAAAAGTGCTAGCTCTATTGTAGTTGTGCTGTACAGATGTATGAAATT
TTGCTGATTTGATCCAGTCTAATGTCTTTATTTTCATCTTCCAGACGACA
TTTTTATTTCTACACTTTACTTTCCATCCACAGATCATCTATAGATCCCT
TCTTTCGATTTATTTTAACCCTTTTAGTACCACTGCTTTTTTGATTCTCT
TATTTTGGAAAATTGTTTAGCTCGAAATCTTATTGATTGGATAGACGGGA
AAGGTGCCCATTATGAAAATTGAGATTAATTCACTACAAGATGGAATCGA
GTAAAATGTTAGACGATCCTATCGTCTACACAAGATCACTGAAAAAGGGA
ATAGTTTAGGAGAGGCGTGATAAATTCGGGTGGAGTAAGCAGTGGCGGAG
ATGTTTACAGTGTAGACGATACCAATTTGGCGCAAAAGCAAAAAACTGAA
AAAGCCGTGGATTTGCCTTTGCGTATTATTGACGATTCGGTGCGGCCATT
TTCAAAACATTCGAAAACGCACAGCATCAACTTTTACTTTTCTACACTGG
CTGAAGGATTTTTTTGCATGAAATTCTTTTCTTTATGGGTTTATTTTGTA
GCTCAAATTTAGAATGTTAGTTTGCAATTTATTTGCAACAAGTATTTAAA
TTTTAAGAGCCATGCTTCGTATGTTTAACATACTTTTTGACTTCAGAAAC
ACAAAGACTAACAGGTTTGTTGTTAATATTTTTTACTTCCAACCTTCATT
TTTCTTCTTTTTAACTACAGTAATTTAACTCAAAGACACCACACTTGCTG
TACATTTAGTATCATTGTACACATATCCCTTCTGATAAAAACAGCTTTTT
ACCTTCTTTTCAATACTCCCTATTTTTGTTTTGTTAGAAATTCTACAAGT
TACCAATTTTTAACTTTTATATTTTTTATATTTGACATGTTCAGTAGTAT
AGAAGTATAATTATAGCCACAGGAAATCATTTTGAAGTTTTTAATTTTTG
TTTGTCTGGAAGATGGTATCAATTTGAAGGTAGACTATGTGCTTCTGGCA
GCTAGAGAAGAGTTTTATTCTGATACAAAAAATCATTACAGGATAGTTTG
ACAATTGAAGACAATTTGTTTACAATATTTTCCACCATACATATTCTATA
TTTAAAGATGATTATATTCTGGTCTTAGGTGGAAGACGTTCATGGTACAG
CAAGATGCTGTTATTGCTACCATACAGTGCTACTTGAAAGTCTTATCCAA
ATCCTAGCTGGAAAAAATGATTATCTAAAAAAAGATAAAATATTTTATTT
TCTCAGACATATCGTACTACATATTCTACAAATGGCCTTTCAATTGCTTT
TAATCGGCTGATTGGAGTAAAAACTGAGCTTTTTCAGGGTTTCGAGAAAT
TAAACCAAAAAATGCCAGAACAAATTCTCACCCTAATTAAAATCCCTGAA
GTACAGTAATCTCTAAATTAAAAAAAAAAATTTTCCTGATTTCCTATATA
AATTTTTAAAAATAAGGATAAAATTTTAGTTTTAGTTCTGTTTTGCTAAC
TTCTTTATATAAACATTATACTGTCTGCTATTGCGAAACCATATTTTACA
TTAACTTATGTAGCATTAAAATTACCATAAATCCTAGAGCACTCTTCAGA
TTGACTTCAGATCTGGTGTGTAAATTCTCTGTACAGACTGGAAGAAATTT
GCAAATAAAAAATGCCCAAAAGATACCCCAATCAAAATCTTGTTTTTTCA
GCAAAGGGCGACAACAGTCAGACAGTTTCTTTTTTCAAACAGCCAAATTT
CTTGTTAAAAAATTGCTAAAATTGGCATAATTCTGGAATTTTTTTACACG
ATATAGACATTCCTTTGCCACACAATTCACCAAATTTTGTTTGAGATATT
CATTCAATCTGAAGTTATTTATAAAAAAATATAAGTCAAAAAATTATATA
TATGAAATATTTTAATTCCCGCAACCCAAGATTATGCTAAATAAACCAGC
TGCGCTGGAAGCTCCGGCTTTAGAGATTAAAAGATGTGAAAGCTGAGCTT
GTTGAGTTAGTTGTGTTCGAACGTTGCCCACAAACTACTTACTAATCAGA
ACATCAGAAAGCAAAGCAATAAATCTATTGAAGAGCGAGTATGAGAAATA
ATCTTAACGAATAAATAAACCAGCTGGAAGTTTAGCTCTTTTAAATGATT
ACACATGCACTTTCTTGCTTAAATAACCAAGCCCATCCCCCGCCCACTCA
TCCTCAACTAAAAAGTTCAAAATTGGAGCTAAAGGAGATAAACATTTAGA
AGTCAATATTTCCAAGTTCTTTATAAATTTATTTTTTTCTAAACTTGCCA
ATAGCAAAGCCATGATGCGCCGTTGATTTGATTGTCCGGATAAAATTTCG
TTAATGGGATAAACTTTGCGAGGATTTAATTTCGCGATTGGGCCTACCCT
CGAAATTTAAAAATTTTGCGGGGACTTAATTTCGCGGGTGGCATTATTGG
GTGGCAATATTTTCACGATTTTGTGACTTAACTGTCAAATCGTGCATTTT
GGTTGTTGAAATACACATTATTAGCACTTCTTTGATGCCAGTAAACATTC
AAAAAGTATTTGTTTGACAAATTTTGAGTTTTGTTTAGAAATATTTCGCG
GATGAGGCCTTTCCAAATTTCCATTGTGACTTAATTTCGCGGATGACACC
CAAATCCGCGAAATCAGCGAAATTTAATCCCTGCGAAAGTTTATCTATTA
AGCCACGGGTTTTTAGCTAACCATTATTTTTTTCTGCTGGGATAATACTT
GGAGAAGAGTAGGATAAACCAAATAAAATGGTACAATAGTGTGTATGTAA
TAAATAGTGTTATATTTGGAAAAAACCTGTTTCGGGTTTGAAAAATGTTC
AAAAGGAACGGTCGCCCAGCCAATGAAATTACGACAAAGTCCAAAAAATA
TCATTTTCAGTTATAACACTGTGAAAATTTCTCCGATCTTGTTCAAATTT
ACACAGGAATTGTGTTTTAGTATCCTTTACTGAATTCTCATAGTGATATG
TTTGTAAAAAATCTGTGTCGGGTTTGAAAAATCAAAAGAAACGGTCGCCA
GCCGCGACAAAATTACGACAAATAAGTCCAAAAACGATCATTTTCAGTCA
TAATACTGTGAAAATTTCTCCAATCTTGTTCAAATTTACACAGGAATTGT
GTTTTAGTATCCTTTACTGAATTCTCATAGTGATATGTTTGTAAAAAATC
TGTGTCGGGTTTGAAAAATCAAAAGGAACGGTCGCCAGCCGCGATGAAAT
TACAACAGGTCCAAAAATGATAATTTTCAGCCATAACACTGTCTGACTGT
GAAAATTTCTCCAATCTTGTTAAAATTTACACAGGAACTGTGTTTCAGTA
TCCTTTATTGGATTCTCATAGTGATATGTTTGTAAAAAATCTGTGTAGGG
TTTGAAAAATCAAAAGGAACGGTCGCCAGCCGATGATGAATACGACAATA
ACAAAGTCCAAAACAGGATCATTTTCAGCCATGGATACATAATACCACAA
AAAATACTGTGTATCAATGGCTGTGTGTTTGAAAGTTTCATTGTCAAGTT
TGAAAATCCAAAAGGGACAACCACCAATTAAATTATATCATCATGAAAAA
TGTCCAAAAGTCCAAAATAGATCATTTTTACAGCATAAAATCATGAGAAA
CACACGTATTTGAATTCAGTATACAGTACAACGTACAACGCACCATCAAA
CTTCTCATAAATCATGTCCAAAACATCATGAATAAGGATGAAAATGATCA
ATTTTTCACTGAGATTTGCCAGTATACGTGCCAGTATTTGCTACACAGTC
AGCTAGTCCACTTTCGATCTGTTTCGATAGCCATCTTTTTCTAAATACTT
TTCGGCCAATCAAATCACAGTATTATCGGAATCAGTGATCCGTTTTTGTT
AAATCGGAATAGATCATCGGATTAGATAAACAGACAAAAAATGTCTTAAC
CCTTGTCGGAAGAGAGAATTAAAGGCTCCTAGGCCGGAGCAAAAATTTTG
TGGCTGAATGTCTTGACCTGTAGTAGAATAGTAAAGGAAAAACAATGTTT
GAGAATGTGTAAGTACAATTTTTACATTTTACCCTAACCACAACAAGTAG
AAAACAACAAATTAGTCACTTATATAGAAAAATTTCTCAAAAATTAAATA
AATAGGTTCAATGTACGGGTAGCAACATTGAGTATTCACAGCTTGCATTT
GGCAGTACCATTTTTGATTGTTTTGACTGGTTTTATTCTTCATTTAACGT
ACAGAACAATTTTCCAACCACGTTCTACTGGTTCAATTTCACAAATTTCA
CAAATTACATAAAATAACACGAAATAATTTTATAAAAAGTTATATAAGCA
GTAGGGAAACTTATTACCAAAACCTTTTTGGTGACTTCACAAAAACATTT
TTGGTTAACTCTAGATATGCACCATTGTCTTCCACAGCTGATTGGTTGAA
AGTGACGTATTGACTTATTTTACGTCACTTACAACGAATCACCTATTGGG
TACGTGATGTAATGTCAGAAGACCTTGGAATGGCACATATCGTGAATTTG
CAGTGAATAGGTGCAATCCATTGAAGTGGCAATCTGAACACCCAATAAAT
AAGAAGAATTAGAATTTGTAACACCAGTTCTAAAAAATTCTATTCATAGA
AACTTGGGGAAATAAAATACTAGATTAGAAACAAACATGAAAAAATTTAC
ATGAAGGAAAGTATTTTCAATCAAAAATCAAAAAGTAGTTTGAGGTATAA
AGTAGTTGAGAAGAGTGAGAATATGTGAAAATTATATGCTCGTGCTCATA
AACCACATAAAAGCACAAGCTGAAAATTTTAAGGAATGGAAAGAATGGAA
AACATACCTGATTAAAATGGAATCTTGAGGGGAAAGTCAGTCAGGTTGTT
GTTCATCATATTCAAAACGATTTTTCCAAAAGCAAATCTTGAGGAATCTA
ATCCCTACTGACACACTAAAGACTTATATACTGTACACAAAAATTCATGC
ATAAAATAAAAGACTAATAAAAGTAGAAATTGTTCTCCACCATGAAAATA
AATCTCATAAAAACAAAAGAGTGAAATTTCATCAGCCATCTTTCTCAAAC
TTTCAGCTGTTTGCACTCACTTCGATCAAAAAACGCAAACGGAAAATCTC
GAAAACCCGCTGACCTCTCTCAGAGGTCAGTCAGGCAAGGATTTTTATAT
TGAGGTGCGCCAAATTGGTATCGTCCGTTTTGTTCCAAAACTCTAACTAC
CGCCACTTTTTTCCCGTAAACCGCCCTGACTCTTTCTCGCATTTACTTTA
AACGGACGATAGCATCGTCTAGTAAAATGTTTGCTGGTTTTTGTTCACTC
TTTGACCCTTTGGTCGAATAACAATAAATAAAACATTCCTTACGAAATTT
TGACCAGATTTTGACTTTGACAAATCCTTTTACAATATTTTTCTCACCAT
GAGATCAAAATCTTGGTCGAAGTCTCAGTCCAATGTCTTCCTTTACATCT
TCAAACTACATTTTTATTCACTTTACTTTCCATCCACAGATCGATCAGGT
GCAAGTGGACCAATATCAAGTTCGTATAAGAGATCTAACAATGCATTTAC
AGCAGGTAAAATGTTTTAAAAAATTCATAATGAGAGAGCTGTGATACGAG
CCCTCCCCATTGGGGGAGGATGATAGAGCTACATTTTTGTATACACATTT
TATATAGCTATGAAGTGACAAAATGAATTCTTCACTTACTGAGAATATTA
GTCTATACCCCTGTCTTTTGAAGCATGTGATTTATCTCCCAAAAGCGAAG
TTCCCTTACCGAAAATCTTACAAGAAATAAAAATCCTAGAGACAATAATA
AGATGATAAGTTTTCGAAATTGGCTCAGAAATATTTTAAAGAATAACTGG
CTAAAATTTTGATAAATACACTCTCTTGATTTTGGTACTCTAAAACAAAT
TTAATGCACGGGTTTCGAATTAAACTGAATTATCGTTTTTGAGTTTTTGG
CTGTTATAGTGACCCATACAGTATGCCAAAATGGAAAAATTAGCTAAAAT
CGCTTGTCGCACGGCCACTGTTTTGTTTATATGATTTTTGTTCGTGCAAA
TTACATGGGATCAAATCAAAAGCTACGCAAAAATCTAATTCGAAATCCGT
GTATTTACGTTGCTTTGGACTACCCGGTATCATAGCTTGGTTTTTGTTTC
CTTCCAGGCGCTGGCATACTGTAAGAACTATCAAACTCAATTATATCAAG
AACAACAATACCGTCAAGAGTTTGGTAATTATCTTGAAGCAGAAGCACAA
AGAATGAAACAAATCTTCTTTTATTCAAATAACATTGGAAAGAATTGTAA
AGAAGCAAGCGCACAACTTCGAAAAATGAAGTACGGTGATTTTTTATTTT
TTATTTTTCATTTGAGCCCTAGGAATGAGTACTTTCAGCCCCGCTAATTA
AATTTTCGTAAATTTCCAGCCAGGACATTCTTATTCTAACCCCTCCGCTT
ATTGAGTTTTTATTACTCGGGGCTTCGCCCGAGTGGTCTATATAGTGTCA
GCAGCCGAAACCATGGGGTTCCCAGTTCGAATCACTGCTCGTTTCATGTT
TTATCAAATATCGGAGAGGCCGGCTGTGGCCCAACTGAAAACAATTCAAA
GACTGGCCAAAAGTCCTTAATTACCTGGGCTATCGAAACGTAAAATTAGT
GTATTTTAGCTAAATCTCTAGCAGCATTTTCTTACTAAGCTAACTGACTT
ACCTTTGCTCACTATAAAGAAATTAGTTAGCTGTCCTAACAAATAGATGT
TGATTTACTAAAGCAAATATAATTTTATTGGCAATACCGAAAACATTAAA
GGTTTTGTTTAAAAAAAAAGAGTGATATCGTTTGCTTACTCATCATTTTT
AATTAACAAGCTTTTTGATATTGAATCAACACGGATGCGGGGCAAGATCG
GTCAGAAAGAGGAAAAGATAAACAATTTTTTGTTTATTCAGCACAATATA
ACAATAGGCAGACACAGTCCCGATATGAAACATGTGTTTGATATGAAACG
GGAGCACTCTAGCAATTTTCTTTCGTTCTTCTAAATACATCAACCAGTTC
AGCATGTTTCTACAAAAATTCAAAGACCATCCGAACTTTTTAAATCTTTC
AAACGAACTACATATAGACACTTCAGTATTTGAAGCTGTGAAAAATTTAC
AATGTGAAGTTGAAATGGCTGGTAATCGACTTGACATGACTTTTAAACAA
GTTGAACGCACACTAATGATAGCTCAATTGGAAATTCCTAATAATCAACA
ACAATTACAACAGCAACCACAACAGACTGCAAACCAACAACATCACACCT
CAATCACAAACAACAAGCTCATCCACAACACTTACTCCAACCAACAAAAT
CCTCAG Coding sequence (CDS) from alignment at sc0000023_pilon:1612042..1620197- >XLOC_039656 ID=XLOC_039656|Name=XLOC_039656|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1458bp|location=Sequence derived from alignment at sc0000023_pilon:1612042..1620197- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTTACCGAAGCTGGAAGGTGAAGGGTTGGATGTAGCGACATTCTT
GGAACTATGTGATAATGATTTGAAAGAATTGGGAATTGAATGTATTTACC
GAAGCTGGAAGGTGAAGGGTTGGATGTAGCGACATTCTTGGAACTATGTG
ATAATGATTTGAAAGAATTGGGAATTGATAAATTCGGACCACGTAAAAAG
ATGTTGTTAGCAATACGTGAATGCAAGGAACGAATGGCTGTTCACGACCC
TAACTAAATTCGGACCACGTAAAAAGATGTTGTTAGCAATACGTGAATGC
AAGGAACGAATGGCTGTTCACGACCCTAACATCGATCAGGTGCAAGTGGA
CCAATATCAAGTTCGTATAAGAGATCTAACAATGCATTTACAGCAGATCG
ATCAGGTGCAAGTGGACCAATATCAAGTTCGTATAAGAGATCTAACAATG
CATTTACAGCAGGCGCTGGCATACTGTAAGAACTATCAAACTCAATTATA
TCAAGAACAACAATACCGTCAAGAGTTTGGTAATTATCTTGAAGCAGAAG
CACAAAGAATGAAACAAATCTTCTTTTATTCAAATAACATTGGAAAGAAT
TGTAAAGAAGCAAGCGCACAACTTCGAAAAATGAAGTACGGCGCTGGCAT
ACTGTAAGAACTATCAAACTCAATTATATCAAGAACAACAATACCGTCAA
GAGTTTGGTAATTATCTTGAAGCAGAAGCACAAAGAATGAAACAAATCTT
CTTTTATTCAAATAACATTGGAAAGAATTGTAAAGAAGCAAGCGCACAAC
TTCGAAAAATGAAGTACGACATCAACCAGTTCAGCATGTTTCTACAAAAA
TTCAAAGACCATCCGAACTTTTTAAATCTTTCAAACGAACTACATATAGA
CACTTCAGTATTTGAAGCTGTGAAAAATTTACAATGTGAAGTTGAAATGG
CTGGTAATCGACTTGACATGACTTTTAAACAAGTTGAACGCACACTAATG
ATAGCTCAATTGGAAATTCCTAATAATCAACAACAATTACAACAGCAACC
ACAACAGACTGCAAACCAACAACATCACACCTCAATCACAAACAACAAGC
TCATCCACAACACTTACTCCAACCAACAAAATCCTCAGACATCAACCAGT
TCAGCATGTTTCTACAAAAATTCAAAGACCATCCGAACTTTTTAAATCTT
TCAAACGAACTACATATAGACACTTCAGTATTTGAAGCTGTGAAAAATTT
ACAATGTGAAGTTGAAATGGCTGGTAATCGACTTGACATGACTTTTAAAC
AAGTTGAACGCACACTAATGATAGCTCAATTGGAAATTCCTAATAATCAA
CAACAATTACAACAGCAACCACAACAGACTGCAAACCAACAACATCACAC
CTCAATCACAAACAACAAGCTCATCCACAACACTTACTCCAACCAACAAA
ATCCTCAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1612042..1620197 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 412-729:319 |
| Aaloc | 232-408:1200 |
| Aaloc | 166-231:1868 |
| Aaloc | 91-165:7626 |
| Aaloc | 1-87:8157 |
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