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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1760749..1763032+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039643 ID=XLOC_039643|Name=XLOC_039643|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2284bp|location=Sequence derived from alignment at sc0000023_pilon:1760749..1763032+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGTGAAGTTACAGAGAAATTTATCACAAGGCCCGTTTTACACTAC
CATTTTACTAATGTTGATCATTAGTACACAAACGATGAACGCAGAAAAGC
CTTCAGCTGAGGTTatcgaagaaataaaaaagatcaTACTTCTAAAGATT
GGCGTGGATAAACCGCCCCCACCCGACACATCAGAACGCCCGAACtttca
agaacaagttaaagcACAATCTATTAGAACGTGGCGACGAAATACACGAT
TTCAAGCTGAACATGAAGATAGAGCCTTATCTAAGATACAAGCCAAACCA
ATTAATAAAGGTAAGTTGATATTAATTACCATCCCTTGGTTTAATGACCC
TATAATGATATGTAAAGTCTCCATAACGTgacaaaatattcacaaatatG
TTCGAGTTGAGGAtatattcgagttatggagtaagacATTGTTAATCAgt
taactgaagggatcatAAAACTTAATCGAGTCAACAGGAAAGTcgagtta
tagaagttcgagttaaagagaatcCACTGTAGCACGTGGATATGAAAATA
GACTTTCTAAACAAAAGATAGGAACCAAAAATGGAGTATAAATATGTTTT
ATCCCCGTAAAATCTTTGGTCGGGGAAAATTGACCTGTAATTTCTCAAAT
gttttaataataaaattttccccactaattttcaatcatttttttctccc
cGATAAGTTAAATATATACCGTAGCTTAAGTGTGACTTGCTATTGCGCTG
CTATCATCCTTTCACTATTCCCTTCGTTTCCAGAAAGAACTGAAGTTGAA
TCGTGCTCGGTCCCAGTACTCATGATGTGAAACATACTGGTTTTTTACCA
GTAGTTGTAAATCTAAGCTACCgaaaaattgtataaatttgcGACTATTG
GCTGAATATAATGAATAAAACAGACACGGTGAGGGTTAGGGTCCAGGAAT
TTTAACGATTCAAACAGTATAACAATCACACAATTTAGCTGTGGTTCAAA
TTCTTTTCACAGCATTTTTGTCAGTTTGAGCTCCTTGACATGACAAGAAT
TACATTAAAAGattgcatttttttttgaaagtgtcaaCCTGTCAAGAAAT
ATTAAAgctatcaaaatattatttttgatgaaatggATCCGTTTAGTTTG
GTCGTAAATCATAGAGTCCTGTCATAATTTATATACCGGTGTTCGAACCC
TCAAAAGTCGATTTATTTGACCTTGATAAAGAGAAGTCTATACGGTTATA
TGCCTCGTGGTCGTACTAGCCCTTCGGCTGTCAATCATCTGTCAAGCAGG
GTCGCTCCTTTAGATAGGTATATAAATCAACTAAATAAGTTTTGTGAGAT
TTTAAAACTTGATAAAACGGttcattttttgatgatttttatccCTATCC
CTAAGTCCATTACCGACTTGTATCTGTGTTTTTTGCAACTGAGACGGTTA
GCTTctaatttgtctagatcctaCTCTCTGAGGACAAGGGTGAAATCTGT
ACTTTTactgtcctcgattttgcggatCAAAACTGCggatttttccaaat
cgctttaAAAGTGCAAGTACTCTACTCAgtaacatttttttcataattta
tcttttttagcTGGATTTCGtgtgttttctttcaaaagcgACCAATTCTT
TCAAAAAGGATACGCAATCAAGTCCGCAAAATTAACGTTCATCCCTGGTA
AAGATTTGACATCCAAAACAGGACCACAATCACAAATTGAAATACAACGT
CGTAAAATCGTACGATACACAATTGACGCGTCGTCAAAATTAACCGTCGT
CGTCGATATTAAAGGTGACATTGATCTATGGAAGAAAAAACACGGCTCAA
AAGCGGACTATCGATTAAAATTCAAATGTTCTTCAAAAGTATGCATTGAT
TCAACTACCATACCATTTATAGATTTGGAATATCGTAAAATTAGTACCAA
AGTTAAGAAGAGTTCAAATCCTGGTCAAATATGCAGCCCTGGAGGATGTT
GTCGAAAAACTGTAACAGTATCTATTAAGGATCTCGGTTGGAGCGATTGG
TTTTTCATGCCAGAAAGTTTTGACTATCATTACTGTGTAGGGACCTGCTC
TAATATGCAGAATTCGTTATATTTCAGACTATTGAAAAGCTTAAATTCAT
CAACTTGTTGTGCGCCAACTGAACTTACGGGCATGCGCGCTTTGTATCGT
ATTAATAAACTAGTACATGATCGATATATTAAAAACTTGACACCTAAAGC
ATGTGCTTGTGGTGGTATTGCGGGTGTGCGGTGA Coding sequence (CDS) from alignment at sc0000023_pilon:1760749..1763032+ >XLOC_039643 ID=XLOC_039643|Name=XLOC_039643|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000023_pilon:1760749..1763032+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGTGAAGTTACAGAGAAATTTATCACAAGGCCCGTTTTACACTAC
CATTTTACTAATGTTGATCATTAGTACACAAACGATGAACGCAGAAAAGC
CTTCAGCTGAGGTTatcgaagaaataaaaaagatcaTACTTCTAAAGATT
GGCGTGGATAAACCGCCCCCACCCGACACATCAGAACGCCCGAACtttca
agaacaagttaaagcACAATCTATTAGAACGTGGCGACGAAATACACGAT
TTCAAGCTGAACATGAAGATAGAGCCTTATCTAAGATACAAGCCAAACCA
ATTAATAAAGATGATGGTGAAGTTACAGAGAAATTTATCACAAGGCCCGT
TTTACACTACCATTTTACTAATGTTGATCATTAGTACACAAACGATGAAC
GCAGAAAAGCCTTCAGCTGAGGTTatcgaagaaataaaaaagatcaTACT
TCTAAAGATTGGCGTGGATAAACCGCCCCCACCCGACACATCAGAACGCC
CGAACtttcaagaacaagttaaagcACAATCTATTAGAACGTGGCGACGA
AATACACGATTTCAAGCTGAACATGAAGATAGAGCCTTATCTAAGATACA
AGCCAAACCAATTAATAAAGcTGGATTTCGtgtgttttctttcaaaagcg
ACCAATTCTTTCAAAAAGGATACGCAATCAAGTCCGCAAAATTAACGTTC
ATCCCTGGTAAAGATTTGACATCCAAAACAGGACCACAATCACAAATTGA
AATACAACGTCGTAAAATCGTACGATACACAATTGACGCGTCGTCAAAAT
TAACCGTCGTCGTCGATATTAAAGGTGACATTGATCTATGGAAGAAAAAA
CACGGCTCAAAAGCGGACTATCGATTAAAATTCAAATGTTCTTCAAAAGT
ATGCATTGATTCAACTACCATACCATTTATAGATTTGGAATATCGTAAAA
TTAGTACCAAAGTTAAGAAGAGTTCAAATCCTGGTCAAATATGCAGCCCT
GGAGGATGTTGTCGAAAAACTGTAACAGTATCTATTAAGGATCTCGGTTG
GAGCGATTGGTTTTTCATGCCAGAAAGTTTTGACTATCATTACTGTGTAG
GGACCTGCTCTAATATGCAGAATTCGTTATATTTCAGACTATTGAAAAGC
TTAAATTCATCAACTTGTTGTGCGCCAACTGAACTTACGGGCATGCGCGC
TTTGTATCGTATTAATAAACTAGTACATGATCGATATATTAAAAACTTGA
CACCTAAAGCATGTGCTTGTGGTGGTATTGCGGGTGTGCGGTGAcTGGAT
TTCGtgtgttttctttcaaaagcgACCAATTCTTTCAAAAAGGATACGCA
ATCAAGTCCGCAAAATTAACGTTCATCCCTGGTAAAGATTTGACATCCAA
AACAGGACCACAATCACAAATTGAAATACAACGTCGTAAAATCGTACGAT
ACACAATTGACGCGTCGTCAAAATTAACCGTCGTCGTCGATATTAAAGGT
GACATTGATCTATGGAAGAAAAAACACGGCTCAAAAGCGGACTATCGATT
AAAATTCAAATGTTCTTCAAAAGTATGCATTGATTCAACTACCATACCAT
TTATAGATTTGGAATATCGTAAAATTAGTACCAAAGTTAAGAAGAGTTCA
AATCCTGGTCAAATATGCAGCCCTGGAGGATGTTGTCGAAAAACTGTAAC
AGTATCTATTAAGGATCTCGGTTGGAGCGATTGGTTTTTCATGCCAGAAA
GTTTTGACTATCATTACTGTGTAGGGACCTGCTCTAATATGCAGAATTCG
TTATATTTCAGACTATTGAAAAGCTTAAATTCATCAACTTGTTGTGCGCC
AACTGAACTTACGGGCATGCGCGCTTTGTATCGTATTAATAAACTAGTAC
ATGATCGATATATTAAAAACTTGACACCTAAAGCATGTGCTTGTGGTGGT
ATTGCGGGTGTGCGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1760749..1763032 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 313-984:1613 |
| Aaloc | 1-309:1 |
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