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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000032_pilon:164813..171009- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039635 ID=XLOC_039635|Name=XLOC_039635|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6197bp|location=Sequence derived from alignment at sc0000032_pilon:164813..171009- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTATAGGTTGTTATTTTGTTTGGTACTATGGAGTCCTATCGTGCT
GTGTTCTCGTCGTCCTTTATATCAACATTATGTAGAAGGTATAGAATTTT
AACGTTACAGTTAGCCCGGGGTCCACTTAAACCTTTATGATAGACTGGAT
GGCGCAATTAAGTGGCCCGGTAGTATATGGTAATATGTTTTTGCTTAGGC
GGACTGTAAAACAGTCCGCCAGATTTTAGTTCTTTTTGGAAGGTAAAAAC
AGTATGAAGCAATGTTATTATTTGAGAATAAGGGATTGCAAATCTGTTAC
TGATGTTTGTTTCTCATTTTTGGTTATATCTTTCAACTCAAAGGAGTTTT
TTTGTTATTTGGATTTTAAACATTCTTTTTCAAAACATGGCGACCTAGTC
CAAACGATCCTAGTCTACTTCATTGGACTCAGCGTTATCAAAAATTATCA
AAAAGCAAAGTTCAGCCAGAAGTAGACACTAAAGTCTGTCCAGATATAAT
TGGCAGTGGAAACAAGAATGCCTGTAACTTTTGATAATTGAATATAATTA
TGGAAATTTTTTTGCTTGTTTCAGAGAATCAAAAGCGCTATGAATGTATT
TTTGTTGAAAGATTCGCGATTTTTAGCGGTTAAATTTGCGATTGTAAAAA
TTGAGCTTTTTTTCTACTTATATGCTTTAACGTTCATTTTTACACCAGTG
GTAGTTCAACCTTAGGTTAAGAAGTTTATTAAATTTCAAGGCAAACATAT
GGAAGCCGAAATACCCCTTGGTAGCACTTTTCTGTGAAATATCAAATCTC
CAACTTATTACTAAAAACGGGGTAAGGTTTAAGAGACAATGATAACTAAA
GGGGACCTTATACCTTATCGGGGAAAAAAATGTCGGGGGAAAGTGACGAA
AATTTTGAGGGGGTGACCAAATTTTTCCCCGACGAAATATTTCCCCGACA
TTTTATCACCCGACCAAAACTTGTACCGATTTTTTATCTCCGACCAAAAC
ATTTACCCGAAATTTTATACCGCAACCAAAATTTGAATCTAATTTCTTTC
CACCTTTATTTACCGAAATTAGTGCTTTAAACGTCGAATTACAAGATCCA
TTTTCGAGCTAGTGAAGGAAACCAAATCTTTTGGACAGTTTAGTCGCGGG
TGAAAGTGACGAATTTGAAATTTTTGCCGGGAAAAGTGACGAATTTGAAA
TTTTTGCCGGGGGAAAAAAAAGTGACGAAAATGCCTCTAGGTGACGAAAT
TTTTCCCCGACGAAAAAAAAACCCGACTAAATGAAACATTTTTCCCCGAT
AAGAGTTTAGAAGAAATTCGAGTTATAGAGGTTCGAAATAAAGAATAATT
CATAAGAATTTTTATGACGAAATTAGCCAAAAAATTAGGAATATGCTAAG
AATAATTACCACAATGATGGAATTTGGCAACTGAAGCTAAGAATGCAAAT
TTTAGAGCAATTAACCTACAAATTGCCAATTATTCGTCAGCAATGCTAAA
ATGTTTCAACAAAATGCCTAATTTGAGTAATATTTTTTTGTTCACTAGAT
GGGCCTCTTTCAATTGAAACAAACATTTTTCGATTTCGATGATTTTTTAA
TTGCCGATGACGTCATCGATTACGTCATTTTTTGGGCTATTTTCCTTTAT
AGCTTCTCAAATATTGATTTTCAGGTATATGTTATGATATTTTTTGGAAT
CCTTGGATAAATACTGAGGTTAAGCATACAAGGATAATCACGACGACGGA
CGAAAAATGTAATAGGCTAGTGAAAGTACGAAATTTGATTGGTTGAAACT
CACTGGCCTGTTAAATTTTCTTTCGCCGTTGTGATTTCACCGACTTACTT
AACCTCAGTAATATCTTTCATTTGAGCCATATATGAGCATCTAACTTTCA
CTTTCATTTTCAAGCCCCAGCAAAAGTAATGACGTCACATGGGGACCAGC
AAAATGGTCAAAATTTTTCTCACCACTCGTTTTCGTGATCTTATAGACCT
AATTGATCATTTAAAAAAGTTAGTTTGCTTTTAATAAGTCTGTGCACACG
AAGAACATAGTCGCTCTCACTAAAATGGAAAAACACCGTTCTCATAAAAA
AAACATGTATTTTTGATTTGTTTCAGGATGTAAGAAATATGAGGTTCAAG
AATACTGTCCAGGAACGTCTACTACCCTATACCACACAAAGAAAAAAGGT
TATGTTTGGTTTAAGGTCATTGAGAAAGCAAAACCAAAGGATTCATATAA
AACGCACTACGATGAAGGATACGAAATCAAAGATGATGGTGATAGATATT
CTATCGAATCTGGTGACCTAAACATCAAAAAGCTTGCAGCCAATGATCAC
GCATTATACTTCTATAGACCAAACTTTACAACACTCCTTGAATGTCCAAA
TTATAGAATAATCGTATACGGTAAGATATAAGTTACGTGTTTTTTATAAG
AACAAACTATATTAGAACATCAGGCTTCGATAGTCAAAATATCAAAAACA
TTTTGAGACTTTGCAGACACCCGATTTCTTAGGAAAATGGACAAAGATAC
TCACAAAATTGTGAAAATAAGAACATGTTTAGAACATTTTTAGGCTTAAC
TCGAAAAGTTAAGAATATCCGAATGCTTCAAAAGTTTTGGATGTTCTTAT
AAAAAAAACAATGTTTTAATCTCTATGACCCAGTGAGAATTGTTTGAGTG
AAGATCGATGATAGTGCTAAATTCGAGCCTTTCATTTCTTATAAAAGGAA
TGAGTAATGATAAAATAACTAGGAAATGCAGAACACCTGGTCTTATTTTT
TCTTCCTCCATTTAAATATTTTTGTTTTTAAAGAACAAAGGAGCTTACCT
TAAGGGAACTAATTTTCGCGGTGGGTGGGTATTTTCGAGGGAAACAAATT
TTACGGTATACACCCAGAACTCCAAAAGTTGCTTCCTTAACGGGGGGGGG
GGGTTCAGGGGTCTTAAATACCGTCATACCGACAAAGATTTGGGTCAAAT
ACCGTAATACCGTCGATAAAGGAAGCCTAATTACCGATACCGGTAAAAAA
TTAAATACCGTAATCCCGTCGTTTTTTTCTTCGGGTAATACCGATTTACC
GGGGATAAAAGGCCCAATACCGTCGTACCGTAAAAGTGAACCCCCCCCCT
TTACGGTATAGAAAGGTTAAATTTATAAGATTTAGAAAAGTGGGTGCGAA
TACAAATTCAGTATCACAAATAATAAAGATTAACTTCTTATCCTTGTTCT
TTTTCAGGTTTAAAACCCAAACACAACAGGATTGAGGTAAAAGAAGGCGA
GACGGCTACTTTAGGATTTTATTTGAACGTACCTAGTAAATATTCTCCTA
AAGATTCCAAGATATACAAAATGGACGGTAAAGTCATGTTTGACGGAAAT
AATGGCAACACAGTTAAATACTCACTTAGTAGTAGACTTGAATATATGCT
TTTAAGGTATAGACGCAAGAATACTAAAGTTTTTGAGAAATTCTTGTATA
CCAGTAAGTTTAATTGTTTATTTGTTTCTTTTGGTGTTTTTCCTTTTAAT
TTCAATGATGAGAGTGCCATGTTATGTTAAAAAAGAAGATTTCATCTTTT
GAAAAATATAATTGTTTTTGGATGAATATACGAAAAATGTTTTCGAAAAG
GTTGTTGCAGTAAAGATACCAGTTTCCGGTTATTTGAATTCTCCTACTTA
CTTCAAAGCAGTTAGCGTGGTGGCCGGGGAGGCAGAAGGGGCAACCTTCA
CCCCAATTAACCAATTATTTGGGGATGATAATTAGTCTCTAGCTATATAC
TTCGTTCAAGTACGAAACCAGATAAACAGTAGTATACATACATGCTTTTT
TAAAAGAATAGTGTATTTTGGATGAGGGTCAAGTATTCTTGAGAAATTAC
CAAAATCGAGGGTGGCATATTCTTAACGTATTCTTACTTGTTAGACTTGA
CTTTTATACAAACATGAGAGATGATCAATTTGAGAGTTTGGGACTTTTGA
GTGCACATTGAGAGCTAAAATCATATTTCTGCTTCGAATTTTCAATTTAG
GTCTAACAAAAGAAGCAGTTTTATTCCATTAACCAAATACAAAATGACTA
TATTCTTATCAAATTCTGTGAAACTTTAAGGGTATTTCTACGGAAAGACC
CCGGTTTTTGCCAGTAGTGGCAAATTTTATACAACTTTTGTCTAGGTTAA
ATTTGCCACTACTGGCTAAAACCGGGGTAGTTCCGTAAAAAAACATTACG
TCATGAATATCATGAATAGAATTATAAAAAAACGTGTATTTCATTATCAT
TTCTTTCTTCCTTATAGCTTTGACGATTACTGACATACAAAAGAAACAAG
AAGGACTCTGGAAAAGCGAATGGACAAGGACTGGTCCTTATGGAACAATT
ATTTGTAAAACTGGAACTTTTGGTGCCGAAGTATTTTTATACGTAGATAG
TAAGCTAAATTTTAAGATTTCGTAGATGACACTGCACGCTCTCTTTTATA
AGAATGTATTCTATAAGAATATTTATGACGAACTGGACCAAAAAATTAAG
AATATCGTAAGTGTGTACACCAACAGTCGTAAGTGTGTACACCCCGACTG
CAAAAGCAGCCATCGACAACAGTGACGATATCCATATCCATCTTATTCTA
TGAAACCTGGGCGGTAAAAATCAATTCAAATCCGACGTTTATATGTGAAA
ACTTACTACATAGGAAAGTATTACACAAGTAGATTTCCCTCTAGTCTTCG
GCTATATTAATCTTATTTCCTATTTAGCTCCAACAACAACCACAACCACA
ACAACGACCACCACTACCACTACGACAACAACGACAACGACAACACCGAC
AACACCGACAACAACAACAACACCGACAACACCTAAACCAAAGGATCCTC
TTGAATCTGGTTCCGCAAAAGCAATCGGCGCAATATGTTCAATCGGTATT
TCATGTGCCGTCATCTTTGCTCTATGGAAATTTGTTTTCGAAAAGTGAGT
AATCATAATTGGGAATATTTCGAGGTGATCCCTCCCAGATCCATTCAAGC
CGAAAGGAGCCTCGAATTCCAAGTTTCTACACTGTCGAACATTTTTAAAA
AACAGTGAATATGAGTGGATAAATTAGGGGATTGCAGTAGATAAAGGAGT
TCTTCACATCAAAATCTACCACTGCTGTCTTTTCCGGATGTAAACTTTGC
ACTTCATTTTTTCCTAATCAAATCCTAATTTGACCGATCTGCTGCAAAGA
TAAAAAAACTTTGTCCCCGATTATTATTATTGAAACAGACAGACAGACTA
TTGAGGCGTCCCCTTAACGCAAGATAACATATAGCATTATTGTCTACATC
TGGTTCCAAGGTAGTTGGTCTTGAATATAAATCATTTTGACATTTCAGGA
AACTGAGTGGTGATCAAGAGGAAGACGAAATAGAAAAAGGTGTTAGAGGA
ACGAGAAAAGACGATGAAAGCAATAACAATACTAAAAAGAACGGTGGACG
TTCCAAAAGACGACGTAAAGAAGACAGCCAAGAAACGAATGAGGAAGATG
ACTCCAACCAGAAATCGAAGAAGGATAGCTCACACGAAGAGAAAAATAGA
AAAAAGTCACGACATAAGATGAAAAAGGAGACTTCGGACTTTGAAGACTC
GCCAGAGGTAGATGGAAGGGAAAAGAAGGGTTCCCGAGCCCCACCAGGAA
TTCCTGGAAGAGAGATTTCGGAAATCCAAGAGCAACCTTCAATACCCGGA
AGAGGAAAGCACGGCAGCCGAGCACCGCCAGGGATTCCCGGAAGAGAGAC
TTCGGTGATCAACGAGCAACCGTCAAAACCGGGGAGAGGAAAACAAGGCA
ACCGAGCACCGCCAGGAATTCCCGGAAGAGAGACGTCCGCGATCCAAGAG
CAACCGTCAATACACGGAAGAGGAAAGCACAGCCACCGATCGCCACCAGG
AATTCCCGGAAGAGAAACTTCGGAGATCAAAGAACCCTCAATACCCGCAA
GAGGGAAGCAAGGTCACCGAGCACCACCTTTACCAGGGAGAGGAGGCGAA
GAAACACCCGCTCTACCCCCTGGAAGGGGTGGGCAAACGAAGGATGACGG
ACAAAGACGACGGAAGGAAAAAGAAGGGTACAGAAAAGTAAGGGAACACG
ACCCAATGACGCCGCCCTTGCGAGGAGATGATATTTTCGCACCGTAG Coding sequence (CDS) from alignment at sc0000032_pilon:164813..171009- >XLOC_039635 ID=XLOC_039635|Name=XLOC_039635|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3552bp|location=Sequence derived from alignment at sc0000032_pilon:164813..171009- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTATAGGTTGTTATTTTGTTTGGTACTATGGAGTCCTATCGTGCT
GTGTTCTCGTCGTCCTTTATATCAACATTATGTAGAAGATGAAGTATAGG
TTGTTATTTTGTTTGGTACTATGGAGTCCTATCGTGCTGTGTTCTCGTCG
TCCTTTATATCAACATTATGTAGAAGGATGTAAGAAATATGAGGTTCAAG
AATACTGTCCAGGAACGTCTACTACCCTATACCACACAAAGAAAAAAGGT
TATGTTTGGTTTAAGGTCATTGAGAAAGCAAAACCAAAGGATTCATATAA
AACGCACTACGATGAAGGATACGAAATCAAAGATGATGGTGATAGATATT
CTATCGAATCTGGTGACCTAAACATCAAAAAGCTTGCAGCCAATGATCAC
GCATTATACTTCTATAGACCAAACTTTACAACACTCCTTGAATGTCCAAA
TTATAGAATAATCGTATACGGATGTAAGAAATATGAGGTTCAAGAATACT
GTCCAGGAACGTCTACTACCCTATACCACACAAAGAAAAAAGGTTATGTT
TGGTTTAAGGTCATTGAGAAAGCAAAACCAAAGGATTCATATAAAACGCA
CTACGATGAAGGATACGAAATCAAAGATGATGGTGATAGATATTCTATCG
AATCTGGTGACCTAAACATCAAAAAGCTTGCAGCCAATGATCACGCATTA
TACTTCTATAGACCAAACTTTACAACACTCCTTGAATGTCCAAATTATAG
AATAATCGTATACGGTTTAAAACCCAAACACAACAGGATTGAGGTAAAAG
AAGGCGAGACGGCTACTTTAGGATTTTATTTGAACGTACCTAGTAAATAT
TCTCCTAAAGATTCCAAGATATACAAAATGGACGGTAAAGTCATGTTTGA
CGGAAATAATGGCAACACAGTTAAATACTCACTTAGTAGTAGACTTGAAT
ATATGCTTTTAAGGTATAGACGCAAGAATACTAAAGTTTTTGAGAAATTC
TTGTATACCAGTTTAAAACCCAAACACAACAGGATTGAGGTAAAAGAAGG
CGAGACGGCTACTTTAGGATTTTATTTGAACGTACCTAGTAAATATTCTC
CTAAAGATTCCAAGATATACAAAATGGACGGTAAAGTCATGTTTGACGGA
AATAATGGCAACACAGTTAAATACTCACTTAGTAGTAGACTTGAATATAT
GCTTTTAAGGTATAGACGCAAGAATACTAAAGTTTTTGAGAAATTCTTGT
ATACCACTTTGACGATTACTGACATACAAAAGAAACAAGAAGGACTCTGG
AAAAGCGAATGGACAAGGACTGGTCCTTATGGAACAATTATTTGTAAAAC
TGGAACTTTTGGTGCCGAAGTATTTTTATACGTAGATACTTTGACGATTA
CTGACATACAAAAGAAACAAGAAGGACTCTGGAAAAGCGAATGGACAAGG
ACTGGTCCTTATGGAACAATTATTTGTAAAACTGGAACTTTTGGTGCCGA
AGTATTTTTATACGTAGATACTCCAACAACAACCACAACCACAACAACGA
CCACCACTACCACTACGACAACAACGACAACGACAACACCGACAACACCG
ACAACAACAACAACACCGACAACACCTAAACCAAAGGATCCTCTTGAATC
TGGTTCCGCAAAAGCAATCGGCGCAATATGTTCAATCGGTATTTCATGTG
CCGTCATCTTTGCTCTATGGAAATTTGTTTTCGAAAACTCCAACAACAAC
CACAACCACAACAACGACCACCACTACCACTACGACAACAACGACAACGA
CAACACCGACAACACCGACAACAACAACAACACCGACAACACCTAAACCA
AAGGATCCTCTTGAATCTGGTTCCGCAAAAGCAATCGGCGCAATATGTTC
AATCGGTATTTCATGTGCCGTCATCTTTGCTCTATGGAAATTTGTTTTCG
AAAAGAAACTGAGTGGTGATCAAGAGGAAGACGAAATAGAAAAAGGTGTT
AGAGGAACGAGAAAAGACGATGAAAGCAATAACAATACTAAAAAGAACGG
TGGACGTTCCAAAAGACGACGTAAAGAAGACAGCCAAGAAACGAATGAGG
AAGATGACTCCAACCAGAAATCGAAGAAGGATAGCTCACACGAAGAGAAA
AATAGAAAAAAGTCACGACATAAGATGAAAAAGGAGACTTCGGACTTTGA
AGACTCGCCAGAGGTAGATGGAAGGGAAAAGAAGGGTTCCCGAGCCCCAC
CAGGAATTCCTGGAAGAGAGATTTCGGAAATCCAAGAGCAACCTTCAATA
CCCGGAAGAGGAAAGCACGGCAGCCGAGCACCGCCAGGGATTCCCGGAAG
AGAGACTTCGGTGATCAACGAGCAACCGTCAAAACCGGGGAGAGGAAAAC
AAGGCAACCGAGCACCGCCAGGAATTCCCGGAAGAGAGACGTCCGCGATC
CAAGAGCAACCGTCAATACACGGAAGAGGAAAGCACAGCCACCGATCGCC
ACCAGGAATTCCCGGAAGAGAAACTTCGGAGATCAAAGAACCCTCAATAC
CCGCAAGAGGGAAGCAAGGTCACCGAGCACCACCTTTACCAGGGAGAGGA
GGCGAAGAAACACCCGCTCTACCCCCTGGAAGGGGTGGGCAAACGAAGGA
TGACGGACAAAGACGACGGAAGGAAAAAGAAGGGTACAGAAAAGTAAGGG
AACACGACCCAATGACGCCGCCCTTGCGAGGAGATGATATTTTCGCACCG
TAGGAAACTGAGTGGTGATCAAGAGGAAGACGAAATAGAAAAAGGTGTTA
GAGGAACGAGAAAAGACGATGAAAGCAATAACAATACTAAAAAGAACGGT
GGACGTTCCAAAAGACGACGTAAAGAAGACAGCCAAGAAACGAATGAGGA
AGATGACTCCAACCAGAAATCGAAGAAGGATAGCTCACACGAAGAGAAAA
ATAGAAAAAAGTCACGACATAAGATGAAAAAGGAGACTTCGGACTTTGAA
GACTCGCCAGAGGTAGATGGAAGGGAAAAGAAGGGTTCCCGAGCCCCACC
AGGAATTCCTGGAAGAGAGATTTCGGAAATCCAAGAGCAACCTTCAATAC
CCGGAAGAGGAAAGCACGGCAGCCGAGCACCGCCAGGGATTCCCGGAAGA
GAGACTTCGGTGATCAACGAGCAACCGTCAAAACCGGGGAGAGGAAAACA
AGGCAACCGAGCACCGCCAGGAATTCCCGGAAGAGAGACGTCCGCGATCC
AAGAGCAACCGTCAATACACGGAAGAGGAAAGCACAGCCACCGATCGCCA
CCAGGAATTCCCGGAAGAGAAACTTCGGAGATCAAAGAACCCTCAATACC
CGCAAGAGGGAAGCAAGGTCACCGAGCACCACCTTTACCAGGGAGAGGAG
GCGAAGAAACACCCGCTCTACCCCCTGGAAGGGGTGGGCAAACGAAGGAT
GACGGACAAAGACGACGGAAGGAAAAAGAAGGGTACAGAAAAGTAAGGGA
ACACGACCCAATGACGCCGCCCTTGCGAGGAGATGATATTTTCGCACCGT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000032_pilon | genome | sc0000032_pilon:164813..171009 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 979-1776:799 |
| Aaloc | 763-975:1419 |
| Aaloc | 631-759:1879 |
| Aaloc | 385-627:2939 |
| Aaloc | 91-381:4070 |
| Aaloc | 1-87:6198 |
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