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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000149_pilon:156379..158622+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039632 ID=XLOC_039632|Name=XLOC_039632|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2244bp|location=Sequence derived from alignment at sc0000149_pilon:156379..158622+ (Clytia hemisphaerica_ch_hm2_pilon)
CATTCCAAAGAACAAGTTTCTGCTGCAGTCCATTCACTCCAAGGGGCAAT
GTACGTCCCGCATGGCGCTCTACCTGTCACAGATTACAATAACCCTGTTT
TATGGGTCGGTGCCTATCCTTGGTTGTTTCCTTATGGATTAGGGGGTCCA
GAAATCAAGCGCCACCCACCTGTTAGTTTGAAAACATACATCCGTCATAT
GTTACTACTTGCTGATAAAAGGTTTAGCATggatatttcttttaaattcc
aCATCTTCAATGTTCTTCAGAAGCGCGACGTTTCTCTTCACACCTCACTT
TTGATTAGAAGACCCAATTTTCATTCTTCAGCGGCTGATATTGCTAGAAT
CACGCAaggaaatttggtacagatgttgcAATCTTTTGAGAATAAAACGA
CAATTACAGATCCAAACATTAAAACACTCATGAAAAGTCTTTCTTCAACT
GGATCACACATTCGAGGTTCACCTTTTTGCAAGCAAAGCTACAGGAGGGA
AATCTTTGGTTTGATGATACGTTATGGGACGCCACCATTATGGATAACAA
TAAGCCCCGCAGTTGTCCATTCACCAATTTTCCTCTCTTTAAATGGGAAT
GAAATCGATTTCAGCAGGATATCAGCGTCAGATCTACCATCCACTATTGA
TAGAGCAAGATACGTAGCAAATGACCCTGTCTCTGCTGCTAGATATTTCA
ATATCGTTGTAAATGCTTTCACTTCGTATTTGTTAGGATATCACCAATCA
GGTGGTGGTATCTTTGGGACATCATCAGCATACTATGGTTGCATAGAGGA
GCAAGGAACTGGCACGTTACATATTCACATGCTGGTCTGGCTGGTAGGTT
TTAAAGCAATTACTGATCTAGAGACTGAGCTACAGAATGATATTTTCAAG
AACGATTTGGTGAATTATTTAGAATCGATCATCAAAGAAGGCTACATGGA
CGATGTTCAAACAGTACCTCAAGTAGAAGTTTCTGAAATATCATTGCGGA
GACCCGTGAACCCCTCGACAGAAGAATTTGCTGAAGAACTTGCCAATGAT
GTCAATAAGCTTGTAAAAGTCGCAAATACGCACAGACATACATTCACCTG
TTACAAGTATGGTAAATCACGAGAATGCAGGTTTGGGTTTCCACGTGACC
TTTACCCTGAAACGGTTATAACCGAGAAcgaaatcaaattaaaaagaacG
AGCCCAATTATAAACAATTACAACCCGATCGTCATGACATGCATCAGAAG
CAACCACGACATCAAGTTTATCCCTAGTGGAAAGGACGGTAAGGCTTGTG
TGTTTTATATGACTGATTATGCCACCAAGTCGCAACTCTCAACCCACCAA
ATGCTTCCGCTTATTGCAGCTTCAAGGaaaaaaaTGGATATCGCTAATGT
ACCAGGTGATTATATAAGCCGTTCCAAGATGTTGATTACAAAATGCCTTA
ATAGGATAACTACAGAAGTAGAGATATCAGGGTCGCACGTTTGTCACTTT
TTATTGGGAAATTCCGACAAGAAGACGTCTCATTCTTTTGTCCGATTGAA
CTTGCATTCCAGTTTAGCATGGGTGCACGAAGAAATGCGACGATTCGATT
GTCTTGACGAAGTATTCGAAAACGAGGAAGATGAAGAACAACAAACACAA
GTGGGCTATAACATAACACTTGGAAATGAGGGGTTGGTTTTGGTTAATCT
AATGGTTGACTACATCAATAGAGGGTCAGAGCTATCCGATATTTGTCTCT
ATAATTACTGCTCCAAAATTTACAAAGCTAAATTATCAgatgaagaaaag
agaaaactttccaaaaagaCAGGAGGCAGGGGACGCAAACCGCAGCCACG
ATACCTTTTTGCCGAAGGTCACCCTCAATCAGAAACCCATTTACAAATTG
AAAGGGCAGAAGCAGTCATCCCAGCCCTATCACTCCTACCACCCAGTGAA
GATGGTGACAAGGAAAAATTTTACACTTGTATGTTGTTACTCTTCAAACC
TTTCTCGAATTTTGATCAGCTATACAATGGAATTAGCTGGGAAGAAACTT
ATATGAACACTGACTTTAAGGAAAGTATTGGTTTTATTTGGAACATCAAA
GAAATGCATATTggtatgaaagaaaaagaagaaagcatTCAAGTGCGTAG
CCCTGATGTTTTTGAAGGAAACCATGATAACGAAGAAGAAATCGATTTCA
CTCTTGAGGAGACTCGAAATGAAATTACACTTATTCGATCACAG Coding sequence (CDS) from alignment at sc0000149_pilon:156379..158622+ >XLOC_039632 ID=XLOC_039632|Name=XLOC_039632|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4488bp|location=Sequence derived from alignment at sc0000149_pilon:156379..158622+ (Clytia hemisphaerica_ch_hm2_pilon)
CATTCCAAAGAACAAGTTTCTGCTGCAGTCCATTCACTCCAAGGGGCAAT
GTACGTCCCGCATGGCGCTCTACCTGTCACAGATTACAATAACCCTGTTT
TATGGGTCGGTGCCTATCCTTGGTTGTTTCCTTATGGATTAGGGGGTCCA
GAAATCAAGCGCCACCCACCTGTTAGTTTGAAAACATACATCCGTCATAT
GTTACTACTTGCTGATAAAAGGTTTAGCATggatatttcttttaaattcc
aCATCTTCAATGTTCTTCAGAAGCGCGACGTTTCTCTTCACACCTCACTT
TTGATTAGAAGACCCAATTTTCATTCTTCAGCGGCTGATATTGCTAGAAT
CACGCAaggaaatttggtacagatgttgcAATCTTTTGAGAATAAAACGA
CAATTACAGATCCAAACATTAAAACACTCATGAAAAGTCTTTCTTCAACT
GGATCACACATTCGAGGTTCACCTTTTTGCAAGCAAAGCTACAGGAGGGA
AATCTTTGGTTTGATGATACGTTATGGGACGCCACCATTATGGATAACAA
TAAGCCCCGCAGTTGTCCATTCACCAATTTTCCTCTCTTTAAATGGGAAT
GAAATCGATTTCAGCAGGATATCAGCGTCAGATCTACCATCCACTATTGA
TAGAGCAAGATACGTAGCAAATGACCCTGTCTCTGCTGCTAGATATTTCA
ATATCGTTGTAAATGCTTTCACTTCGTATTTGTTAGGATATCACCAATCA
GGTGGTGGTATCTTTGGGACATCATCAGCATACTATGGTTGCATAGAGGA
GCAAGGAACTGGCACGTTACATATTCACATGCTGGTCTGGCTGGTAGGTT
TTAAAGCAATTACTGATCTAGAGACTGAGCTACAGAATGATATTTTCAAG
AACGATTTGGTGAATTATTTAGAATCGATCATCAAAGAAGGCTACATGGA
CGATGTTCAAACAGTACCTCAAGTAGAAGTTTCTGAAATATCATTGCGGA
GACCCGTGAACCCCTCGACAGAAGAATTTGCTGAAGAACTTGCCAATGAT
GTCAATAAGCTTGTAAAAGTCGCAAATACGCACAGACATACATTCACCTG
TTACAAGTATGGTAAATCACGAGAATGCAGGTTTGGGTTTCCACGTGACC
TTTACCCTGAAACGGTTATAACCGAGAAcgaaatcaaattaaaaagaacG
AGCCCAATTATAAACAATTACAACCCGATCGTCATGACATGCATCAGAAG
CAACCACGACATCAAGTTTATCCCTAGTGGAAAGGACGGTAAGGCTTGTG
TGTTTTATATGACTGATTATGCCACCAAGTCGCAACTCTCAACCCACCAA
ATGCTTCCGCTTATTGCAGCTTCAAGGaaaaaaaTGGATATCGCTAATGT
ACCAGGTGATTATATAAGCCGTTCCAAGATGTTGATTACAAAATGCCTTA
ATAGGATAACTACAGAAGTAGAGATATCAGGGTCGCACGTTTGTCACTTT
TTATTGGGAAATTCCGACAAGAAGACGTCTCATTCTTTTGTCCGATTGAA
CTTGCATTCCAGTTTAGCATGGGTGCACGAAGAAATGCGACGATTCGATT
GTCTTGACGAAGTATTCGAAAACGAGGAAGATGAAGAACAACAAACACAA
GTGGGCTATAACATAACACTTGGAAATGAGGGGTTGGTTTTGGTTAATCT
AATGGTTGACTACATCAATAGAGGGTCAGAGCTATCCGATATTTGTCTCT
ATAATTACTGCTCCAAAATTTACAAAGCTAAATTATCAgatgaagaaaag
agaaaactttccaaaaagaCAGGAGGCAGGGGACGCAAACCGCAGCCACG
ATACCTTTTTGCCGAAGGTCACCCTCAATCAGAAACCCATTTACAAATTG
AAAGGGCAGAAGCAGTCATCCCAGCCCTATCACTCCTACCACCCAGTGAA
GATGGTGACAAGGAAAAATTTTACACTTGTATGTTGTTACTCTTCAAACC
TTTCTCGAATTTTGATCAGCTATACAATGGAATTAGCTGGGAAGAAACTT
ATATGAACACTGACTTTAAGGAAAGTATTGGTTTTATTTGGAACATCAAA
GAAATGCATATTggtatgaaagaaaaagaagaaagcatTCAAGTGCGTAG
CCCTGATGTTTTTGAAGGAAACCATGATAACGAAGAAGAAATCGATTTCA
CTCTTGAGGAGACTCGAAATGAAATTACACTTATTCGATCACAGCATTCC
AAAGAACAAGTTTCTGCTGCAGTCCATTCACTCCAAGGGGCAATGTACGT
CCCGCATGGCGCTCTACCTGTCACAGATTACAATAACCCTGTTTTATGGG
TCGGTGCCTATCCTTGGTTGTTTCCTTATGGATTAGGGGGTCCAGAAATC
AAGCGCCACCCACCTGTTAGTTTGAAAACATACATCCGTCATATGTTACT
ACTTGCTGATAAAAGGTTTAGCATggatatttcttttaaattccaCATCT
TCAATGTTCTTCAGAAGCGCGACGTTTCTCTTCACACCTCACTTTTGATT
AGAAGACCCAATTTTCATTCTTCAGCGGCTGATATTGCTAGAATCACGCA
aggaaatttggtacagatgttgcAATCTTTTGAGAATAAAACGACAATTA
CAGATCCAAACATTAAAACACTCATGAAAAGTCTTTCTTCAACTGGATCA
CACATTCGAGGTTCACCTTTTTGCAAGCAAAGCTACAGGAGGGAAATCTT
TGGTTTGATGATACGTTATGGGACGCCACCATTATGGATAACAATAAGCC
CCGCAGTTGTCCATTCACCAATTTTCCTCTCTTTAAATGGGAATGAAATC
GATTTCAGCAGGATATCAGCGTCAGATCTACCATCCACTATTGATAGAGC
AAGATACGTAGCAAATGACCCTGTCTCTGCTGCTAGATATTTCAATATCG
TTGTAAATGCTTTCACTTCGTATTTGTTAGGATATCACCAATCAGGTGGT
GGTATCTTTGGGACATCATCAGCATACTATGGTTGCATAGAGGAGCAAGG
AACTGGCACGTTACATATTCACATGCTGGTCTGGCTGGTAGGTTTTAAAG
CAATTACTGATCTAGAGACTGAGCTACAGAATGATATTTTCAAGAACGAT
TTGGTGAATTATTTAGAATCGATCATCAAAGAAGGCTACATGGACGATGT
TCAAACAGTACCTCAAGTAGAAGTTTCTGAAATATCATTGCGGAGACCCG
TGAACCCCTCGACAGAAGAATTTGCTGAAGAACTTGCCAATGATGTCAAT
AAGCTTGTAAAAGTCGCAAATACGCACAGACATACATTCACCTGTTACAA
GTATGGTAAATCACGAGAATGCAGGTTTGGGTTTCCACGTGACCTTTACC
CTGAAACGGTTATAACCGAGAAcgaaatcaaattaaaaagaacGAGCCCA
ATTATAAACAATTACAACCCGATCGTCATGACATGCATCAGAAGCAACCA
CGACATCAAGTTTATCCCTAGTGGAAAGGACGGTAAGGCTTGTGTGTTTT
ATATGACTGATTATGCCACCAAGTCGCAACTCTCAACCCACCAAATGCTT
CCGCTTATTGCAGCTTCAAGGaaaaaaaTGGATATCGCTAATGTACCAGG
TGATTATATAAGCCGTTCCAAGATGTTGATTACAAAATGCCTTAATAGGA
TAACTACAGAAGTAGAGATATCAGGGTCGCACGTTTGTCACTTTTTATTG
GGAAATTCCGACAAGAAGACGTCTCATTCTTTTGTCCGATTGAACTTGCA
TTCCAGTTTAGCATGGGTGCACGAAGAAATGCGACGATTCGATTGTCTTG
ACGAAGTATTCGAAAACGAGGAAGATGAAGAACAACAAACACAAGTGGGC
TATAACATAACACTTGGAAATGAGGGGTTGGTTTTGGTTAATCTAATGGT
TGACTACATCAATAGAGGGTCAGAGCTATCCGATATTTGTCTCTATAATT
ACTGCTCCAAAATTTACAAAGCTAAATTATCAgatgaagaaaagagaaaa
ctttccaaaaagaCAGGAGGCAGGGGACGCAAACCGCAGCCACGATACCT
TTTTGCCGAAGGTCACCCTCAATCAGAAACCCATTTACAAATTGAAAGGG
CAGAAGCAGTCATCCCAGCCCTATCACTCCTACCACCCAGTGAAGATGGT
GACAAGGAAAAATTTTACACTTGTATGTTGTTACTCTTCAAACCTTTCTC
GAATTTTGATCAGCTATACAATGGAATTAGCTGGGAAGAAACTTATATGA
ACACTGACTTTAAGGAAAGTATTGGTTTTATTTGGAACATCAAAGAAATG
CATATTggtatgaaagaaaaagaagaaagcatTCAAGTGCGTAGCCCTGA
TGTTTTTGAAGGAAACCATGATAACGAAGAAGAAATCGATTTCACTCTTG
AGGAGACTCGAAATGAAATTACACTTATTCGATCACAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000149_pilon | genome | sc0000149_pilon:156379..158622 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2244:1 |
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