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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:1879778..1881622- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039610 ID=XLOC_039610|Name=XLOC_039610|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1845bp|location=Sequence derived from alignment at sc0000001_pilon:1879778..1881622- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGATTACTCAAAAATCATTATGAATGAACATCCGAAGAAAACTAATTT
TGTTTTGGTTGGGTCCTTAATAATAATATTTGTAATTATTAGTAGTGAAA
TAACCTTCTACATAGACTGGCCTAACGTTCACAAAGGCATCCCAAACGTT
AGAAGACAAAGCTCGGTCACGGCAAAATGGAGCAACGATACGATAAATTT
AGATTTGTTTCTGAAGCAGATGTCACGTGCTAAAAGATTTGAAAGAAATC
CCGAGTTTAGTGACGTCATGGAAAACATTGTCACACGATTGAGTCAGATC
AATGATGGTCACCTTACAAAGAACAATCTAAGTAATAACGTCACAATCAT
ATTAAACGGTGTCAATGAGATTTCAAACATCGAAACTTTATTAAACGACA
TTGAAACCCAACCTTCTTGGAGTAAATCCGTCAATATTCTCATTGGTTTG
AACGAAACCAGCTACAAAAGACATTCAAAAAGATTGAGCAGAATTCAAAG
TTTTCTACCCAATTTAAAATGGGTTCTTGTAAAAACTGATCAAACCGATT
CAATAGCTAAAACTTTATCAAACATTGCTACCAAATGCAATACGAAATAT
GTTATGTTAACCCGAAGATTAACGAAAATCCATAACAAGTTTGACATCAA
TCACTTTGTGGTTCCTTTAAGGAAAGGATCCAGCGATGTTATTTCCGGAT
CGGTGTTATATCCAGATGGTCGCTGGAGATCCGGATGTTACCAATCAAAA
TTGATTTGGAGTCAATACAAAATTGAATTCGGTTTCGATATTACGAATCA
ACAACAACAAATTATGTGTGATTATTTTGATGGCCCTTTTGCGATGGATA
GAGACGTTCTTTTGGGTTATTTAGAAGCAAAGATTAAAACCAAATGCCAA
GATGTGTTATTTTATCCAGAGATCATATTTACAATGACTAAGCAATTAAA
AATTATAAAGTCACACCTTTCCAGTGTATTCTATATGGAGCAATGGCAAG
ATTTTGAAAATCTTACTCGCAAAGATTGGCTTGATTTTGCGATAAGAAAC
GATATCTCTGAATTCTACGATGGCGATCTTGATAAACATTATGAATTTAC
TAATATTGAAGCTAAGGTGAAATGTCAGAAAACAAACAAGAAAAGTAAAT
CATTGCTTGAGCAAAGAGCTTGTATGAGGGACCTACATTTCATGCTAATC
GACACATTTAAGCTCTTTGATAATCTAGGCTACCATTACAATAGCGAGGA
CGGTTCAGGTCTGGCGGCCGTCAAGCTTCATGATACTCTGCCATGGGATA
TAGACCAAGACTTTTTGTTCCGAAGTCAAAATTTCACGTCTCTAGTACAA
CACGAGTCGACATGGAAAAAACTCGGAATGTCATTTGGTAAACAGCTCAA
TGACCCATGCGTGAAAGATGTAAATAGGTTTAAAAAATTTTCTTGTGGCT
ATATAGGAATTCACAAAGGGAAATGGAAACTCGAAGCTTGGGGAGTAACC
ATATTCCCATACGACATATACAAGAATCCGAACCAAATATCGTATATCGT
TCGAATTTTGAAATATCCATTTCCGAGCAGTCGAATCAAAGGAATTAATA
CAATACTGCGAATGGGAGATTATTGGTCAGCTTTTAGACCAAATCCAGGG
CTATTTGCACGTGGGCGGTATGGGCTTGATATCCTAAAACATTCCCCACA
TTGGAGACAACAAGGATCATCTACGAGCTGGATGATGTACAAACCTAAAT
CGAAATTTGAAGCTTGTACAAATGAAGGACACCATTTATGCATGGATCAA
TATTTGGCTGATGGGAATATTCAATTTCAACGACCGTGGGCTTAA Coding sequence (CDS) from alignment at sc0000001_pilon:1879778..1881622- >XLOC_039610 ID=XLOC_039610|Name=XLOC_039610|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3690bp|location=Sequence derived from alignment at sc0000001_pilon:1879778..1881622- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGATTACTCAAAAATCATTATGAATGAACATCCGAAGAAAACTAATTT
TGTTTTGGTTGGGTCCTTAATAATAATATTTGTAATTATTAGTAGTGAAA
TAACCTTCTACATAGACTGGCCTAACGTTCACAAAGGCATCCCAAACGTT
AGAAGACAAAGCTCGGTCACGGCAAAATGGAGCAACGATACGATAAATTT
AGATTTGTTTCTGAAGCAGATGTCACGTGCTAAAAGATTTGAAAGAAATC
CCGAGTTTAGTGACGTCATGGAAAACATTGTCACACGATTGAGTCAGATC
AATGATGGTCACCTTACAAAGAACAATCTAAGTAATAACGTCACAATCAT
ATTAAACGGTGTCAATGAGATTTCAAACATCGAAACTTTATTAAACGACA
TTGAAACCCAACCTTCTTGGAGTAAATCCGTCAATATTCTCATTGGTTTG
AACGAAACCAGCTACAAAAGACATTCAAAAAGATTGAGCAGAATTCAAAG
TTTTCTACCCAATTTAAAATGGGTTCTTGTAAAAACTGATCAAACCGATT
CAATAGCTAAAACTTTATCAAACATTGCTACCAAATGCAATACGAAATAT
GTTATGTTAACCCGAAGATTAACGAAAATCCATAACAAGTTTGACATCAA
TCACTTTGTGGTTCCTTTAAGGAAAGGATCCAGCGATGTTATTTCCGGAT
CGGTGTTATATCCAGATGGTCGCTGGAGATCCGGATGTTACCAATCAAAA
TTGATTTGGAGTCAATACAAAATTGAATTCGGTTTCGATATTACGAATCA
ACAACAACAAATTATGTGTGATTATTTTGATGGCCCTTTTGCGATGGATA
GAGACGTTCTTTTGGGTTATTTAGAAGCAAAGATTAAAACCAAATGCCAA
GATGTGTTATTTTATCCAGAGATCATATTTACAATGACTAAGCAATTAAA
AATTATAAAGTCACACCTTTCCAGTGTATTCTATATGGAGCAATGGCAAG
ATTTTGAAAATCTTACTCGCAAAGATTGGCTTGATTTTGCGATAAGAAAC
GATATCTCTGAATTCTACGATGGCGATCTTGATAAACATTATGAATTTAC
TAATATTGAAGCTAAGGTGAAATGTCAGAAAACAAACAAGAAAAGTAAAT
CATTGCTTGAGCAAAGAGCTTGTATGAGGGACCTACATTTCATGCTAATC
GACACATTTAAGCTCTTTGATAATCTAGGCTACCATTACAATAGCGAGGA
CGGTTCAGGTCTGGCGGCCGTCAAGCTTCATGATACTCTGCCATGGGATA
TAGACCAAGACTTTTTGTTCCGAAGTCAAAATTTCACGTCTCTAGTACAA
CACGAGTCGACATGGAAAAAACTCGGAATGTCATTTGGTAAACAGCTCAA
TGACCCATGCGTGAAAGATGTAAATAGGTTTAAAAAATTTTCTTGTGGCT
ATATAGGAATTCACAAAGGGAAATGGAAACTCGAAGCTTGGGGAGTAACC
ATATTCCCATACGACATATACAAGAATCCGAACCAAATATCGTATATCGT
TCGAATTTTGAAATATCCATTTCCGAGCAGTCGAATCAAAGGAATTAATA
CAATACTGCGAATGGGAGATTATTGGTCAGCTTTTAGACCAAATCCAGGG
CTATTTGCACGTGGGCGGTATGGGCTTGATATCCTAAAACATTCCCCACA
TTGGAGACAACAAGGATCATCTACGAGCTGGATGATGTACAAACCTAAAT
CGAAATTTGAAGCTTGTACAAATGAAGGACACCATTTATGCATGGATCAA
TATTTGGCTGATGGGAATATTCAATTTCAACGACCGTGGGCTTAATTAGA
TTACTCAAAAATCATTATGAATGAACATCCGAAGAAAACTAATTTTGTTT
TGGTTGGGTCCTTAATAATAATATTTGTAATTATTAGTAGTGAAATAACC
TTCTACATAGACTGGCCTAACGTTCACAAAGGCATCCCAAACGTTAGAAG
ACAAAGCTCGGTCACGGCAAAATGGAGCAACGATACGATAAATTTAGATT
TGTTTCTGAAGCAGATGTCACGTGCTAAAAGATTTGAAAGAAATCCCGAG
TTTAGTGACGTCATGGAAAACATTGTCACACGATTGAGTCAGATCAATGA
TGGTCACCTTACAAAGAACAATCTAAGTAATAACGTCACAATCATATTAA
ACGGTGTCAATGAGATTTCAAACATCGAAACTTTATTAAACGACATTGAA
ACCCAACCTTCTTGGAGTAAATCCGTCAATATTCTCATTGGTTTGAACGA
AACCAGCTACAAAAGACATTCAAAAAGATTGAGCAGAATTCAAAGTTTTC
TACCCAATTTAAAATGGGTTCTTGTAAAAACTGATCAAACCGATTCAATA
GCTAAAACTTTATCAAACATTGCTACCAAATGCAATACGAAATATGTTAT
GTTAACCCGAAGATTAACGAAAATCCATAACAAGTTTGACATCAATCACT
TTGTGGTTCCTTTAAGGAAAGGATCCAGCGATGTTATTTCCGGATCGGTG
TTATATCCAGATGGTCGCTGGAGATCCGGATGTTACCAATCAAAATTGAT
TTGGAGTCAATACAAAATTGAATTCGGTTTCGATATTACGAATCAACAAC
AACAAATTATGTGTGATTATTTTGATGGCCCTTTTGCGATGGATAGAGAC
GTTCTTTTGGGTTATTTAGAAGCAAAGATTAAAACCAAATGCCAAGATGT
GTTATTTTATCCAGAGATCATATTTACAATGACTAAGCAATTAAAAATTA
TAAAGTCACACCTTTCCAGTGTATTCTATATGGAGCAATGGCAAGATTTT
GAAAATCTTACTCGCAAAGATTGGCTTGATTTTGCGATAAGAAACGATAT
CTCTGAATTCTACGATGGCGATCTTGATAAACATTATGAATTTACTAATA
TTGAAGCTAAGGTGAAATGTCAGAAAACAAACAAGAAAAGTAAATCATTG
CTTGAGCAAAGAGCTTGTATGAGGGACCTACATTTCATGCTAATCGACAC
ATTTAAGCTCTTTGATAATCTAGGCTACCATTACAATAGCGAGGACGGTT
CAGGTCTGGCGGCCGTCAAGCTTCATGATACTCTGCCATGGGATATAGAC
CAAGACTTTTTGTTCCGAAGTCAAAATTTCACGTCTCTAGTACAACACGA
GTCGACATGGAAAAAACTCGGAATGTCATTTGGTAAACAGCTCAATGACC
CATGCGTGAAAGATGTAAATAGGTTTAAAAAATTTTCTTGTGGCTATATA
GGAATTCACAAAGGGAAATGGAAACTCGAAGCTTGGGGAGTAACCATATT
CCCATACGACATATACAAGAATCCGAACCAAATATCGTATATCGTTCGAA
TTTTGAAATATCCATTTCCGAGCAGTCGAATCAAAGGAATTAATACAATA
CTGCGAATGGGAGATTATTGGTCAGCTTTTAGACCAAATCCAGGGCTATT
TGCACGTGGGCGGTATGGGCTTGATATCCTAAAACATTCCCCACATTGGA
GACAACAAGGATCATCTACGAGCTGGATGATGTACAAACCTAAATCGAAA
TTTGAAGCTTGTACAAATGAAGGACACCATTTATGCATGGATCAATATTT
GGCTGATGGGAATATTCAATTTCAACGACCGTGGGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:1879778..1881622 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1845:1846 |
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