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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:1722922..1726042+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039591 ID=XLOC_039591|Name=XLOC_039591|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3121bp|location=Sequence derived from alignment at sc0000001_pilon:1722922..1726042+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCGATCCGAGTTTATCCAAAACTATTTTGAAAGAAGATGAATACAGGTA
AGGTTTTTTATATATACATTGAattcaaagaacatttttttcttcggGTA
GTCTTTCAACTGCAAAATTTTGTAGCTCGTTTGAATTCAGTTAAATTCTC
CCTTTGAAGATTATGATTGAATCTGATTGAGTGCAAGAgttttaaacatt
attttttcgaaaaaagtatGATTGGTTGCatgagttttgaattttttttt
tgaattcttttttctaaatttgataGATACATAAACGATCTGATCATTCT
ATACCAAATGGAGCATCGCCCAAAACTACGGATCGCTTTGTTACACGTTT
TCGGGTGCTTCTGCCAACTCGGTGCGGACTTTGTATCAACGTTGCTATGT
TCAGTATTACCGACGGAGTTGGCGCAAGACTTGATGCAAGATCAATCCGA
CATGACGAAATTTTTAACGACGTCGCTGATGTTGACGATGATTTTTTCGA
CAGGTGAACCAGTGCCCTACCATCATTATGTTCaggtaattttctttttc
gaaacgAGGCCCGCAATACCTTTAATCAGTGTGTGTCGCAACATCTTCGG
tttataaatatcaaattttatttaagaATTCCAACTTGGATCTAAAATTT
AGCGGTTCTACCCCTGTATGAAATAAAAAACCTTTCaacctttcaaaatt
tcactagATAGGCTACTACTCCCGCTTCAATGAATTGGGGATATTAACCA
TGCTAATGAGTTAAACTGTGGAAAAGTGTTATATGTAGTGTCGTGGAACG
AACGCAGAATGCAGAAAGCCTCCTGGTCACGTCAGGTAGCGAACTCTCAT
GAACAagtctctgtaactcgaacttTTCATAACTCAAACTAAGTTCAACG
TTATCTagtttgtacatgttttttttaagcataacgcttataagcatatg
aaggctcagatttgcagataacataagcatatacgaCAGCCTGTAATATG
TTTCATGTGGTCAATtttttctgtttaaaaaggtttggaagtggtcaagt
aaaaaaagccATTCCGTGACTAGCCATATCCCTCTGCTCCCGAAATCTGA
AAGCCATTTGAATCAAATGTTTACTAAATTTCcgagaattttacaaaaaa
tggcCTGATATAAGCATTATAATTCATAAGCATATGATAAGCATGGGCTA
TGTTTTGATGCTTTGAAAGATTAAGCAtgcacgagcctgaccaaggggct
gacacttgcttataacaaaaagaaacatgtaTGAAGActcattcaaatat
ttttagttCAACGACGATTTTGTGGAGTTTGTACTGAACACGATTGAAGA
ACCACCGGACAACGATATCGATGATCAAGTTTCGGACACTCTCATTGGAA
TGTTACTCTCCTTTAATCAACATTTCAAAGGTACAACGATCTAAgtatta
tttttccttttcttttgcttcctactctcgggtacctaatagccgggggg
gttggaataagcgggggggttggaaaaaatctcaaaacttaataagcggg
ggggttggaataaaaatgtcctgggtggaaaacttttgaaaaggaggcta
atacagctgaattaggacaaaaaaagggaactttcaaaaaaattttccca
aaaattaataagcgggggggttggaataagaatgtcctgggtggaaaatt
ttcgAaaaattaattagcgggggggacggctattaagtacccgagagtac
tttgCTGATAATTAATACTGCAAAATTATATTATTAGCTGATGGAATTAG
CTTAAAAAGGCCCTAACGCAGCTGATTGGAACAAAAGGTTTCTTTTGGGT
CCAAGAACCATAATTTGGGCAACACCTCTCCAAAACCTCTGAAAAAGGTA
TTACCCCAACCTCAAATCTCTTATCAACAACCTAAATTTGTAGAATCTCC
AGACCCCAACCGAAAATCCAGGAGCACTCAAGATTCTAGTTAAAAGTCCA
TTTTAGCTGAGTCAGCGAAACTTTAAACCCAAATTTTCAGGTTGTACTTT
TCAAGGCCCATTCTTTGAGCCTGGTTTGAAAAGGTCAATCTTATTGAGta
gttgatgacgtcacaggGAAAATATGGCAAATTTTGGCTCAATTCGGACC
ATTTTAAGGGGTCTAAATTGTCTCaaaaaaatctgttcaaaaaatcttgt
ttgcagatgttgaaaaattgacgtcaccATATTATAATGCCTCAAAAGGG
CCCAAAAATTTTCGAATCAAATGTGGTTATTTTTGTGGTTCTTTGATCCA
TAATGAACCTCTGTGGTAAATTTCTACCGGACTTTCATCTTAGGGTTGCT
TTACACGTCATTAATCTTGTCGGTGGTAGAAGATAATTTGTTACAAAAGA
AAACGACTTCTCcaattttcactttatttgtACGTATAATTTTAAAACCT
CAATCTTTTTCTTTCAGCGCCTCGTTCCAGTACGCTGATACAGGTTTTAA
GAAATCGGACAGTCTTTCGGACACTGACTGAGAAAATTCTACTCCTGTTA
AATCGTGAAAGTAAGTTTGCACTGTTTCTGCATGGAACGTTAGCATATTT
CAACGATAGCATTATTATTCTTATATCGTGCCAACATGTATACATTGACT
TAAATTTGATAGTGAACTACTATACTGAAGTTTGAAAAGAGATCTCATGA
CTTTCGCATGACCAGTACAactgctctaccgactgagctatccAGTCCAC
ACTGGAAGCACCTTCGGGAAGTAATTCACTCCACAGTTTTCAACTTCTTC
AACTCTTTTTATGTTtgcaaaactttggggcagcttGTAGAACTAAAAAA
TTAACCTACGGAGCTGAAATTTTTAGTGATTCAGtattttcattttactt
tttttacagCTGATCCCTGTGCGATGTTTGATTTCATCGACCCTTGTCCA
GATTCTGTTCTCAAATTCCTCATCGACGTCTTTAGCGCTAAAGAAACATC
AGAAATGTTCTTCACTAACGATTTATACGTTCTCTTTGACATCATCTTGA
GACAGCTGGTTAATCGAGAAGAGAAGGATAAGGTAAGCGAGACCAAAATG
TGGTCTTTTCTTATTCCTTAG Coding sequence (CDS) from alignment at sc0000001_pilon:1722922..1726042+ >XLOC_039591 ID=XLOC_039591|Name=XLOC_039591|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1470bp|location=Sequence derived from alignment at sc0000001_pilon:1722922..1726042+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCGATCCGAGTTTATCCAAAACTATTTTGAAAGAAGATGAATACAGATC
GATCCGAGTTTATCCAAAACTATTTTGAAAGAAGATGAATACAGATACAT
AAACGATCTGATCATTCTATACCAAATGGAGCATCGCCCAAAACTACGGA
TCGCTTTGTTACACGTTTTCGGGTGCTTCTGCCAACTCGGTGCGGACTTT
GTATCAACGTTGCTATGTTCAGTATTACCGACGGAGTTGGCGCAAGACTT
GATGCAAGATCAATCCGACATGACGAAATTTTTAACGACGTCGCTGATGT
TGACGATGATTTTTTCGACAGGTGAACCAGTGCCCTACCATCATTATGTT
CagATACATAAACGATCTGATCATTCTATACCAAATGGAGCATCGCCCAA
AACTACGGATCGCTTTGTTACACGTTTTCGGGTGCTTCTGCCAACTCGGT
GCGGACTTTGTATCAACGTTGCTATGTTCAGTATTACCGACGGAGTTGGC
GCAAGACTTGATGCAAGATCAATCCGACATGACGAAATTTTTAACGACGT
CGCTGATGTTGACGATGATTTTTTCGACAGGTGAACCAGTGCCCTACCAT
CATTATGTTCagttCAACGACGATTTTGTGGAGTTTGTACTGAACACGAT
TGAAGAACCACCGGACAACGATATCGATGATCAAGTTTCGGACACTCTCA
TTGGAATGTTACTCTCCTTTAATCAACATTTCAAAGttCAACGACGATTT
TGTGGAGTTTGTACTGAACACGATTGAAGAACCACCGGACAACGATATCG
ATGATCAAGTTTCGGACACTCTCATTGGAATGTTACTCTCCTTTAATCAA
CATTTCAAAGCGCCTCGTTCCAGTACGCTGATACAGGTTTTAAGAAATCG
GACAGTCTTTCGGACACTGACTGAGAAAATTCTACTCCTGTTAAATCGTG
AAACGCCTCGTTCCAGTACGCTGATACAGGTTTTAAGAAATCGGACAGTC
TTTCGGACACTGACTGAGAAAATTCTACTCCTGTTAAATCGTGAAACTGA
TCCCTGTGCGATGTTTGATTTCATCGACCCTTGTCCAGATTCTGTTCTCA
AATTCCTCATCGACGTCTTTAGCGCTAAAGAAACATCAGAAATGTTCTTC
ACTAACGATTTATACGTTCTCTTTGACATCATCTTGAGACAGCTGGTTAA
TCGAGAAGAGAAGGATAAGGTAAGCGAGACCAAAATGTGGTCTTTTCTTA
TTCCTTAGCTGATCCCTGTGCGATGTTTGATTTCATCGACCCTTGTCCAG
ATTCTGTTCTCAAATTCCTCATCGACGTCTTTAGCGCTAAAGAAACATCA
GAAATGTTCTTCACTAACGATTTATACGTTCTCTTTGACATCATCTTGAG
ACAGCTGGTTAATCGAGAAGAGAAGGATAAGGTAAGCGAGACCAAAATGT
GGTCTTTTCTTATTCCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:1722922..1726042 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 526-735:2912 |
| Aaloc | 433-522:2470 |
| Aaloc | 307-429:1307 |
| Aaloc | 49-306:278 |
| Aaloc | 1-45:1 |
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