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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:695829..697451- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039518 ID=XLOC_039518|Name=XLOC_039518|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1623bp|location=Sequence derived from alignment at sc0000112_pilon:695829..697451- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATGAAGCATGAAATTCAAAACGTCAAAAAAGAATTCAGTGATAAATT
ACAAGAAAAAGATCTCAGAATTCAAAAGTTAACAAAGGAGTTTGATGCCC
AACTGAAGGAAAGAGATGACGAAATCAAACGACTGAGAAAAGATGTCGAG
GACGCTAAAAAGGATCTCCAACTAGCTTCCAATGAAAACAATGAGAACCA
CAAAGCTATCGAAGAAACCAAAAAGGATTTCACCCGAGTTATCGATGAAA
CCAAAATTGAACAACAAAAAGCCATCGAAGAAACAACAAAAGATTTCACC
CGAGTTATCGATGAAACCAAAATTGAACAACAAAAAGCCATCGAAGAGAC
CAAAAAGGACTTCATCGGAGTTGTCAATGAAACCAAAATTGAACAACAAA
AAGCTATGGAAGAAACCAAAAAGGATTTCACCCGAGTTATCGATGAAACT
AAAATTGAACAACAAAAAGCCATCGCAGAAACCAAAAAGGATTTCAACCG
AGCTATCGATGAAACTAAAACTGAACAACAAAAAGCCATCGAAGAAACCA
AAAAGGATGTCACCCGAGTTATCGATGAAACTAATACTGAACAACAAAAA
GCCATCGAAGAAACCAAAAAGGATTTCACCCAAGTTATCGATGAAACTAA
AACTGAACAACAAAAAGCCATCGAAGAAACCAAAAAGGATTTCAACCGAG
CTATCGATGAAACTAAAATTGAACAACAAAAAGCCAGCGAAGAAACCAAG
AAGGATTTCACCCGAGTTACCAATCAAACTAAAACTGAACAACAAAAAGC
CATGGAAGAAATTAAAAATAATTTCACCCGAGTTGTCAATGAAATAAAGA
CCGAACAAGAGAAAGCCATCGAAGAAACCAAAAAGGATTTCAACCGAGTT
GTGAATCAAACCAAAACTGAACAACAAAAAGCCATTGAAGAAACCAAAAA
GGATTTCACCCGAGTTGTCAATGAAACCAAAACTGAACAACAGAAAGCTC
TAAACAAATCAATGGAAATTATATCTATGATGCTTTATATTACGGATAAA
AACACTCATGAATTTATAAACGGATCACTGAGGGAAAGGAGTGATCATGT
TCATAATTTAAACAAAAAACTAGCCGAAGAAAACAAACTGACATTGCAGA
TTTTAAGCTTACCACAATGCCCTTATTCTTTCACTATCGAGAATTTCAAA
TTCCAATTTGAAGAGGCTAAAAAAACAAATAAAAGAACTTCCTCTCCAAA
CTTCCTCACTGTAAATGGGTACTTAGGACGTCTAAATATCTATTTAAATG
GGTATCGCAGTGCTCAAGACAATCACGTGTCAGTGTTCTTTCAGAACCTA
AAAGGACCATATGATAATTTTTTGAAATGGCCAATACCTTGGAAATCGCA
CTCAATGACACTTCTTGTTAACAACAGAGAAATCGGAAAGAAGTCAAGCC
AAAATTCAGATGATGGAGGTAAATGGAAAGATAATTTCATACGACCCATT
GGTGATGAAGGTAAAGATTTGGGAGTTTCAAAAACCTTTGATCATAAATT
GATAGAAAATCTTACTGATGAAGACGTAGTAGCTATCAAGTTCGATATGG
ATTGTGAAGCTCAAGAGCATTGA Coding sequence (CDS) from alignment at sc0000112_pilon:695829..697451- >XLOC_039518 ID=XLOC_039518|Name=XLOC_039518|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3246bp|location=Sequence derived from alignment at sc0000112_pilon:695829..697451- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATGAAGCATGAAATTCAAAACGTCAAAAAAGAATTCAGTGATAAATT
ACAAGAAAAAGATCTCAGAATTCAAAAGTTAACAAAGGAGTTTGATGCCC
AACTGAAGGAAAGAGATGACGAAATCAAACGACTGAGAAAAGATGTCGAG
GACGCTAAAAAGGATCTCCAACTAGCTTCCAATGAAAACAATGAGAACCA
CAAAGCTATCGAAGAAACCAAAAAGGATTTCACCCGAGTTATCGATGAAA
CCAAAATTGAACAACAAAAAGCCATCGAAGAAACAACAAAAGATTTCACC
CGAGTTATCGATGAAACCAAAATTGAACAACAAAAAGCCATCGAAGAGAC
CAAAAAGGACTTCATCGGAGTTGTCAATGAAACCAAAATTGAACAACAAA
AAGCTATGGAAGAAACCAAAAAGGATTTCACCCGAGTTATCGATGAAACT
AAAATTGAACAACAAAAAGCCATCGCAGAAACCAAAAAGGATTTCAACCG
AGCTATCGATGAAACTAAAACTGAACAACAAAAAGCCATCGAAGAAACCA
AAAAGGATGTCACCCGAGTTATCGATGAAACTAATACTGAACAACAAAAA
GCCATCGAAGAAACCAAAAAGGATTTCACCCAAGTTATCGATGAAACTAA
AACTGAACAACAAAAAGCCATCGAAGAAACCAAAAAGGATTTCAACCGAG
CTATCGATGAAACTAAAATTGAACAACAAAAAGCCAGCGAAGAAACCAAG
AAGGATTTCACCCGAGTTACCAATCAAACTAAAACTGAACAACAAAAAGC
CATGGAAGAAATTAAAAATAATTTCACCCGAGTTGTCAATGAAATAAAGA
CCGAACAAGAGAAAGCCATCGAAGAAACCAAAAAGGATTTCAACCGAGTT
GTGAATCAAACCAAAACTGAACAACAAAAAGCCATTGAAGAAACCAAAAA
GGATTTCACCCGAGTTGTCAATGAAACCAAAACTGAACAACAGAAAGCTC
TAAACAAATCAATGGAAATTATATCTATGATGCTTTATATTACGGATAAA
AACACTCATGAATTTATAAACGGATCACTGAGGGAAAGGAGTGATCATGT
TCATAATTTAAACAAAAAACTAGCCGAAGAAAACAAACTGACATTGCAGA
TTTTAAGCTTACCACAATGCCCTTATTCTTTCACTATCGAGAATTTCAAA
TTCCAATTTGAAGAGGCTAAAAAAACAAATAAAAGAACTTCCTCTCCAAA
CTTCCTCACTGTAAATGGGTACTTAGGACGTCTAAATATCTATTTAAATG
GGTATCGCAGTGCTCAAGACAATCACGTGTCAGTGTTCTTTCAGAACCTA
AAAGGACCATATGATAATTTTTTGAAATGGCCAATACCTTGGAAATCGCA
CTCAATGACACTTCTTGTTAACAACAGAGAAATCGGAAAGAAGTCAAGCC
AAAATTCAGATGATGGAGGTAAATGGAAAGATAATTTCATACGACCCATT
GGTGATGAAGGTAAAGATTTGGGAGTTTCAAAAACCTTTGATCATAAATT
GATAGAAAATCTTACTGATGAAGACGTAGTAGCTATCAAGTTCGATATGG
ATTGTGAAGCTCAAGAGCATTGAGAAATGAAGCATGAAATTCAAAACGTC
AAAAAAGAATTCAGTGATAAATTACAAGAAAAAGATCTCAGAATTCAAAA
GTTAACAAAGGAGTTTGATGCCCAACTGAAGGAAAGAGATGACGAAATCA
AACGACTGAGAAAAGATGTCGAGGACGCTAAAAAGGATCTCCAACTAGCT
TCCAATGAAAACAATGAGAACCACAAAGCTATCGAAGAAACCAAAAAGGA
TTTCACCCGAGTTATCGATGAAACCAAAATTGAACAACAAAAAGCCATCG
AAGAAACAACAAAAGATTTCACCCGAGTTATCGATGAAACCAAAATTGAA
CAACAAAAAGCCATCGAAGAGACCAAAAAGGACTTCATCGGAGTTGTCAA
TGAAACCAAAATTGAACAACAAAAAGCTATGGAAGAAACCAAAAAGGATT
TCACCCGAGTTATCGATGAAACTAAAATTGAACAACAAAAAGCCATCGCA
GAAACCAAAAAGGATTTCAACCGAGCTATCGATGAAACTAAAACTGAACA
ACAAAAAGCCATCGAAGAAACCAAAAAGGATGTCACCCGAGTTATCGATG
AAACTAATACTGAACAACAAAAAGCCATCGAAGAAACCAAAAAGGATTTC
ACCCAAGTTATCGATGAAACTAAAACTGAACAACAAAAAGCCATCGAAGA
AACCAAAAAGGATTTCAACCGAGCTATCGATGAAACTAAAATTGAACAAC
AAAAAGCCAGCGAAGAAACCAAGAAGGATTTCACCCGAGTTACCAATCAA
ACTAAAACTGAACAACAAAAAGCCATGGAAGAAATTAAAAATAATTTCAC
CCGAGTTGTCAATGAAATAAAGACCGAACAAGAGAAAGCCATCGAAGAAA
CCAAAAAGGATTTCAACCGAGTTGTGAATCAAACCAAAACTGAACAACAA
AAAGCCATTGAAGAAACCAAAAAGGATTTCACCCGAGTTGTCAATGAAAC
CAAAACTGAACAACAGAAAGCTCTAAACAAATCAATGGAAATTATATCTA
TGATGCTTTATATTACGGATAAAAACACTCATGAATTTATAAACGGATCA
CTGAGGGAAAGGAGTGATCATGTTCATAATTTAAACAAAAAACTAGCCGA
AGAAAACAAACTGACATTGCAGATTTTAAGCTTACCACAATGCCCTTATT
CTTTCACTATCGAGAATTTCAAATTCCAATTTGAAGAGGCTAAAAAAACA
AATAAAAGAACTTCCTCTCCAAACTTCCTCACTGTAAATGGGTACTTAGG
ACGTCTAAATATCTATTTAAATGGGTATCGCAGTGCTCAAGACAATCACG
TGTCAGTGTTCTTTCAGAACCTAAAAGGACCATATGATAATTTTTTGAAA
TGGCCAATACCTTGGAAATCGCACTCAATGACACTTCTTGTTAACAACAG
AGAAATCGGAAAGAAGTCAAGCCAAAATTCAGATGATGGAGGTAAATGGA
AAGATAATTTCATACGACCCATTGGTGATGAAGGTAAAGATTTGGGAGTT
TCAAAAACCTTTGATCATAAATTGATAGAAAATCTTACTGATGAAGACGT
AGTAGCTATCAAGTTCGATATGGATTGTGAAGCTCAAGAGCATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:695829..697451 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 559-1989:1432 |
| Aaloc | 493-555:1495 |
| Aaloc | 361-489:1624 |
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