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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:615588..624557+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039515 ID=XLOC_039515|Name=XLOC_039515|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8970bp|location=Sequence derived from alignment at sc0000112_pilon:615588..624557+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGTCTGTGGAAAAGACAGAGTGGTAAGACATTTATCTTATAAATat
taaacatttgaaaaagtgtttttttcaccACTTTTCTTTCGCCATCTTTG
ATTTATGATCTAATTCATAACAGAAAAACACTTGCATCACACTGACATCT
TACGCTGGATCTCATACATCAATACAGgggttttaacattttcttgtATG
GGTAAAAAGTCTTCCAGTCTTCCTGCCCagccaaaatcttttatttttgc
cGGCTAGTAGTATTTTGAAACGCGTTCAATTTACTGAATATTCAATTTAC
AGACGGTgtgttttgttttcttgtttctaTTCAAAACCAATAGCGAGAAA
AGATTACATAATCTAACAACATAtattttgaatatgaaaatgaaatagcC
ACGTGAGCCATCAACTTGATTATTTGAATTTTCTGTATACGCGTGCGAAA
GTGTGAAACCTTCTTTAATTGGaggtcatttttattaaaaaaaggcACAA
TTCTCTCCGTTCGAACTTCgtagtatagaccttttttcaaagaggacgtc
ctgttgaataattatgtagtccagccatataaacaatgataaagccatgc
ataattactgtatcatgcatattgtaataattatgcatggttttagcatt
gtttttctgctggactacataattattcaacagggtggcctctttgaaaa
aaggtctattataaaaaatatactgTGAATgttcctaaatctgacagccc
tgcctaatcctgacccccaaataactgttatgacaaaattaaattaacga
ttctaaaatatttgtagagaaaatttcaaaatttttagatgacgtcattt
actgtcggtaaaaattaaagtacgtcaaataatgatgacgtcatcaaaaa
ttttcaattttttttcatgcaatatttcagaattaacaatcaacgtctcc
agtcaaaattttgtgtaaaTTGTAGTAATGTaatcgaagttatcgctgtt
tttaaatatgacgtcatctaacctgtctttttgacgtgtttttttcgacg
tatttcctaacgtaaaaatcagtttttggccgatatcttgagattggctt
aatttaaattttcggcccagcactttccgaaatcctctccataatacgct
tcttttgagctatatacgaaagttaaggaacaatgggaagcggtgcgcgt
cacgcaaaatatgtctggaacttgccttaactcacctgagcaagcctaaa
tttgaaaaatgataaatttccaaggcgttttctcaaaattgatcaaatta
cCAAGGcatcattttctcaaaaatgagaaaaaaatgtgGAATTTCTAATG
TCtcctcaaaaaaattatgcaatttATTTCCATatgtattttgaatttta
gaagcTGGAATTCTGAGGCCATGAATTttgcaaaatgttgtgttgtCCAA
AGGGGGTATACAGAAAATTACTGGAATGACCCAATGCAATGTGCGATTAA
TAAATTGAAGTAAAGATGGTATGTGAAGCCAAATCAAGGCAAGGATGGAA
TTGAGGATAAAAATCCAACAATTTTTTGACTTCCTGACtcaaaagaattg
gaaaattaagaaaaattatctGTCAGTCGGACGAGGCGAatacaagttat
ttgtgatccCAGCCTAAGCCTGGCAGGCTTCGGCATATTAGGCGTGCGAT
CGCACGCGCACGCCTCCGCACACGCCTAAAAGCCTTTTAGGCGTGCAATT
TATCACACGCcataaatcatgaaaatttattgtagaaatattttttctgc
ttGTTTAAAGAAgatcaaatattattttctacTTTAATTATAAGAACCAA
ATAGATGAAAGATAAACTTTCCTTTACTCATTCAAGCTGTTATATGTATA
CAAAGTTTCTTATAAGCAAAATGAATAACTCGCATTCATACAAAACAATG
ATATTTTTCTCTGCGAGGATTTTCTTTCAACAATTCACACTTTTCACATT
AATAAAATAGTTGAATGATACGAAAGCTAAATTAATAGTATCAAAAGGAA
CAATTAGTAAGGCTATTCAAAAGATAGACTAAACAATGTGCCTGAATCAA
TAAGATATTACATAAAGAAGTGTAAAAGTCACCTGTTCTAAGTAAATGCT
AAaagtaaaaatgagaaaacatgctttttaaagacaaaagaataGTTTTT
TCTTCCCTCATATTACATTTTTTGTATGGCCTGAAGTATTCATTTGGAAC
AAAGCTCGATAGGAGTCAACATGTCCGATGGGAAAGTTTCCAAAAAAGGT
AATACTGTTGAGTTAAgcacatttttgaaatataagaaTTGTGATCTTCT
TGGTTATGGAACTCTTGAAAAGAATGGAAAGAAGTTTGTTAATCTTGTAT
GGTGTAAACTTTGTGCCAGATATAAAGATCAACTATGCTCATCAACCTCG
ACATTAAAAGGGTCCGCAAAAACAGCAGCATTGGCTTTCATTGAAGGGAC
AACATCAGTTACAAAATACCAGGTGAGTTGCATTTTCCGTGCATATTTTA
TTCTCATCAAATTATGTGTAGAGGAAGATTCGAGGATTTATAAATGAAAT
GTGAGCTGATATTCTTTTATAAATGCCCACAGTATCCATGGATTCGAGAT
TCAAAGGGTTCAATACTAACATACAGTATGTAAATTAATACAGTATTCTA
CTAACACTTTTTAATGTTAATCACATTTATAATTTTCCCAGCCAGTacac
aacgttcatctaacgtccaTTTAATAACGTTACTTGGacgttaaaataac
gttgtgtgcatGCTGGCTTACTGTGTAATCATGTTAATCACATTTCTTAT
TTATTCTAGATTGATCGACACTTCACTACGGCAGGCCACGCCCTTGCTTG
TACCTTGGATAGTGATCAACCTTCTTCTTCTCGAGTTTCTCAAGAACCCC
GTGATACCCCAattcaaccaaaaatatttacatcaaTACGCAAAAATAGT
GAGGATGCATATATGAAGATGATGAAAACGGCATACACATTGGCTTTGGA
ACCAACTCTTCCATCCCGTCAATTTAAAACCTTGATCAAAGTTCAACGTG
AAAACGGTGTTAGATTGATTGAAGGTGAGTCTGATATTTTTAGGGTGTTT
GAGTAATTACACACCAATTCAAAAGACGTCTTTCCGTTGTCTCTGAATTA
AATCGACATATatgcttttctttataagaataacatACTGTACTTACGTA
TCGTGAATCTTTGTGCTGAGATGATCTTCTTAAAGTCACGAGTATTGTCA
ATTCAAAATGTATTACAGAAATCTACAGAAGTTTTAAcacattgtttgtt
tttttaattaattgatAATGTATTTTGTCAAAGTGAAACAtttcttaatc
ttttgaaaatagaaatacatttttgaaataaaaagtcatATGTATAACTA
TACAAACTTGCAAATTATATACCGTTTCGTCAAACAACAACGGTCGTTGC
ATTGATTTTTCAGAACAGTTTATTTATCTTTGAAATCTTATCTCTTCAGG
AAAAGATGACACCCGCGATGTCCGTGAATACCTTTCCTGCATTGCCGAGG
CCATAAATGAAAAGGTTGCAATCGTACTTGCAAGTGCAAATTTCTTTGCT
TTGCTCAGTGATGGTAGCCAGGCAAGGAAGACccgaaaagaaaaagaaat
ggtTATGGTTCGCGTTGAGAGGAATGGTAAGTTTTTATTTCCTATTTTAC
AGTATACACTACTTATATTAATATTCTgataaaaatatgtcaaaaatgaT
ATTAAACTGAAAAGTATGAACTCTTAGTTCTGTCAACGATCTTATAACCC
AAGTATACTACtatatcttttgttttttaagagCTAGACGAGTTTGGCAA
TACACAGTTTTTAAAAGAATgatattattcttataaaaaaattacgcTAA
TTACTTTTCTAACAGATGAGAATATTTCCAGTGAATTTATTTACATGCcc
tttttctttctcacttGCACTTGCGTCATAAACCTAATTATAAATTCATG
TTGTATATTTGTTCGCTTCAGTACACATAAAGCCCACATGAAAATATCTT
ATGCATTTTTGTCTGTCTAGACTTTTAAAGGGTCGAAAGTTTTATATACA
ATATCATGCAGCAACACAAAGATGAGAAActccttttcttttattttaag
tttGGAACATACAAAAGAATAAGAGagggaaaaatgtttcaatagtAATG
TGATATTAATTAAGAAAGACTTTTTTCTaccaatcaaatttcatttttct
tgttaCCTCACGTGGCAGAAGATTATCTTTGTGACCATATATAGCCATCT
GAAAAGCATAAAGCATATTTTATACACTTCCGTTTTGAgttgtcttttct
ttttctattaaGATAAGAGTCaaatgaaatatcaaaagattttaaagttt
ctCATTTTCGTGATCAGCTTCTTTCAATAAATACCCCACTCGTTACTTTG
TAGAATAAAGTATCAGAAAAAGAAAGACAGCAAAAATAGAATCTTTTGAT
AGAATATTATAACAAAATTCCTTATAAGAATTTTCCCTCCATTTAGATTT
CTTATTAAAAGGATTAGTAGTTTTCAAAGTGGACGATaatcaaaaacaac
ttttagAAGGTAATCtattaaattttctttgcaGGAATCCCAACTTATTT
CGTGGCTTCACTTCTCGAAATGTCAGAATGGGGTGGCACGGATGCCGAGT
CATTGAAGAAAGCAATGGATGACATCTTTTCTGAGAAAGGATCACTTCCT
GTAAAGGAATTTAAACTGAAGCTTGTGTCAGTAACTGCTGATGGTGCCAG
TGTTAACACAGGGAGAATATCTGGACTGATGACAAGGTTTGCATCTACTC
GAATCTGGCTTGTTCGTATTCATTGTATAAACCACAGAATTGAACTTGCT
GTTAAAGATGCATTTACAGGCATAAGCAAATTAAACGAAATTGATGATTT
TTACCAAAACAATTTCAACCTGCTTAAAAATTCTGGTAAGATCAAAGATG
AGATTGGAGCAGCTTCAAAGGCTTTAGGTATACAACATTATGAACTACCT
AAACTCACTGGCACTCGATTTGTTGGGCACAGAAGGAGTGCCTTTAAAGC
TTTATTGAATGATTGGCCTCTTTTTCTAGTTGCCTATGAGAATGTTGTCA
GTGACCCCAAAACAAAATCGGAGACAAAAGCCAAAGTATTAGGACTTCTG
AAAAAGTTTCAGAGCTATAACTTCTTGGCTCAAACGTGTGTATATCTCGA
CCTTTTAGAACATGTTACTCCTGTTTCTAAGGTTTTTGAAGGAGAAGGAC
TTTTACCTTTTGAGGTAAAAAATGCCATCAAGGAAACCATTGATCGTTTA
GAAGAATTGAGAAAAGATGATTACGACGACATTGATAGTCATTTGCAACG
CTTTTGCTGGGGAAGTGATGGTCAAGTCAAGGCTAGTTTTGACAATATAT
CAgacaaaaataagaaactaCCGAATCGAAAGCCTGTGTCGATAACTCTT
GATCTAACACCTTCATTAATCAATGAGAACACTGTTGATACAGCAAAATC
AGTCAGGAGAAGGGCATCAGCTGCACTAACAGAAACCTTAACGGAGAGAT
TCAAGAGCTTCAAGGAAGAGGAAGTGTTTAAGCTAATGGATTGGTGTGAT
CCATCTACTTGGACGGATGAAAAAGATCATGGTCTTGATCAAATCAAGTC
TTTTGCCAGTCATTTCAAAGAACCATTGTCAAGGACAACGTTTGATGAAA
ATCAGATACAAAAAGAATGGAGAAACTTTCGACGCCATGTTGACAAAAAT
CTACCGAAGGTTGAACCAAGACAGGTTTGGAAAACCATTCTTCGATAcaa
acgaaatttttttcctaacATTTGTCTCCTTGGTGAACTCATGCTTTGCC
TGTCTGGCTCGAATTCATCTGTAGAACgagcattttcgattttacGAATG
ATGCTAAGTGACAGAAGATTAAAATCTTCTCATGAATTGCTAAATTACCG
ATTGGTAATAAAGGGAAACGATAAATACTGGACTGACGCTGAGCGAGGTG
AGGTTTTTAAAAGAGCTGTTGATATTTACGTCaaaaaaaGCCCACAGGAA
gagaaaaatcaatcaaaatacaGGGGAAACATCAACCCCAGAACCAATTG
AGGTGTTAGACTCATCATCTGATAATGAGATGAGTGACTTAAGTGAAACT
GAAGAGTCTTTGTCAGACACGGATGACTCTGAGAAAGAATGATTAAATAG
CATTATTGTTACAGAATAACATTGACATTTTTAGACAAACTTACACTTAA
CATCTTATCTAGgttttaattttgatgtattgttgtgcagcatttttcta
agtttttagttttcttatgattttttgatatggatgatttattttagaca
acgttaacaattttttgttttcatggtTATTGATTCTTTTGTCCTCTTGT
TTTAAAATCAACTATCGTAAAATATAATGACTAGATTATCAATGGTGAAG
AAGATCAGGTCTAGGTTCTATCTATATGCagaaaaaagtacgaaggagaa
aataaacgtcttgaaaaatgtaaacaaaagaaagatcattcttagaaatt
tttcaaaaatttgtgcCTCATCAATATTAATGATGtttattataaaataa
aaaaacgatCGCACGCGATCGCACGTCTAAAGCAAATGAGGCGTGCGATG
TTTCGcacgcctaaattactaaaaattactatgtaggcgtgcgatgatca
cacgccttcttttttcttatgccgaagcctgcCTGGGTAtccaaattcaa
aattttagaaaaataactcTTACCCCAAtgtacaaagtttctaaaatttt
agagtcagGTGCAACTAAAAACGTctggtacagtttgtttgatactgcct
gtgagtgaacccttgttgacagaggcgctgtggtatagtggtcattgacc
ttggttgctccAAAAAGGCAACTGAAGTTCAATTCCCAATTACAGCGGTT
CACATGGCAAGTGAttaaaccttcgcccgggtcaacccatgctgTGTGGA
GGGGAAtagggtagtcagttcaaggcgCTAACAAGGTGCTAATCGAAAGC
GTCTATTTGTAAAAATGGGCCTCAAAGCAtcctgcgactcaaccaaatag
aaaaaaaatagaaatagaaatagaaacagactatcaaaattttgaaaccc
aggcagacacataTAATTAATTTACCATAAATCCTCTTTTAAAACTTAAG
CCAAAGGCTgttgaaactcaaaaaaaactttcaaaacatcatcaaaacat
cagccacactTAATTCAGCTCCTATGAAAGGGTGtgggaattagatgagg
gatatCGACATTGGACCAAGTTACtgtttgttcgacttttttaagaccaa
gatttttatcatgtttgttgttgtttgttttgatcactTGCAGGCCTGGT
AATATGAATTGTTCAAGATGatattgaatttcttttctCTCTTGTTCAGT
GATTGATCAGTCAAATAGAGTATGGTAATAAAGTAAGGAATGGTCTTACC
TCGAAGGTCCAGGGCAAACTGGTATGACTGAGCTTTTGGTAAGACATCCA
AGTCTTTCTTCTGGATCAAGTCTGTCAGTGTATTGTGTCTGTGTCCAGTT
TCAGCTAGTGGTCTTGTGTGTATCACTATATGTATCTTGTTTCAATAGTC
TCTTTGTTGCCATTATAAAAGCGACACATACCAGTATCATATCATATATA
TTAAGTCTCTTTATTATAGGTCTAGTCAGGTCTAGTCTAAAAATATAGAA
CAAGATCGTTACAATAGCCCattttcatttcctttcaatgtgttttttta
gattgccatatttttctaaagtttgttttgtttttttttcaaagtggcAT
CTATGAGGTGtcttcatttgaaaaaaacgCAGGAATTTTATGTCTATCTG
CAGATTCAAGACACCAgtttcctttgttatttcaTACTGGAGCTAGAACC
TTCACATctggattttcaaaatttaaggcccatcagGCAACATAAAGTCT
TCTTGTTTTCCTTACCACATCTCAAATGTTTTGAGTAATAGAAAACTCTT
AACATagagtttaaagaaaaataCCCATCATTGTATTAAGCCCTACAAAA
ACCTTTTCCATGTTATATTGTTATTTATGATTATAACAGCCTTCTAGAAA
TTTGCGCTTCAGCTGTGTTTCTCAACAGCGTTTAGCTTGATTACTTGGTT
aatatgaaaaaatcaatttcacaaATGCCTTGAGTAATATTTCAATAGGG
GGTTTAATTTTTACACCCATCTTTTATAATATGTCATCTTTTTTGTGTCG
ATCTATACAGGAATAGCTCAACAATTTAAATAGGAATACTTttatatttt
ggtcaattttcaatatatctGAGAAGAAGGTTTGCTTTTAAAAAACTAAA
TAATCCTTATTTTGATCCTTATTTCTTAGGGTCTATTGTAGCCGTGACTA
TGTGCAAGAAAGCAAGACCTATCGAAGTAAAACAACCGAAACAGTAGAAC
ATCCTTTAAGAGGCACTATAGTAACAGTaaggtttatttattttgacttt
catccatgtgattttgaattttttaaagtttctttaATCAGTAGCTTGTA
ATGTCTTTCTAAATATTTACCTAGTATAGGAAACTTTATATGATTTATCA
TTAtgacttttgattgattttgtaGACTGTAAAAGGCTCAAATGTCAGAG
ATAGCAGCCTGAAGAAATCAACACCTAAAGAGGCACCATCAAAGAAAGAA
ATCCCAACGGATCCTTTATCAATTATTGCCAGTTCAAGTGAGTTTGATGG
TACAGATCCTTTGTCGCTGATGGCAAGAGGTGATGATGCAAAGCCATCCT
TTGGAAGAAAGAAAGATGTA Coding sequence (CDS) from alignment at sc0000112_pilon:615588..624557+ >XLOC_039515 ID=XLOC_039515|Name=XLOC_039515|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=636bp|location=Sequence derived from alignment at sc0000112_pilon:615588..624557+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGTCTGTGGAAAAGACAGAGTGATGGGGTCTGTGGAAAAGACAGAG
TGGGTCTATTGTAGCCGTGACTATGTGCAAGAAAGCAAGACCTATCGAAG
TAAAACAACCGAAACAGTAGAACATCCTTTAAGAGGCACTATAGTAACAG
GTCTATTGTAGCCGTGACTATGTGCAAGAAAGCAAGACCTATCGAAGTAA
AACAACCGAAACAGTAGAACATCCTTTAAGAGGCACTATAGTAACAACTG
TAAAAGGCTCAAATGTCAGAGATAGCAGCCTGAAGAAATCAACACCTAAA
GAGGCACCATCAAAGAAAGAAATCCCAACGGATCCTTTATCAATTATTGC
CAGTTCAAGTGAGTTTGATGGTACAGATCCTTTGTCGCTGATGGCAAGAG
GTGATGATGCAAAGCCATCCTTTGGAAGAAAGAAAGATGTAACTGTAAAA
GGCTCAAATGTCAGAGATAGCAGCCTGAAGAAATCAACACCTAAAGAGGC
ACCATCAAAGAAAGAAATCCCAACGGATCCTTTATCAATTATTGCCAGTT
CAAGTGAGTTTGATGGTACAGATCCTTTGTCGCTGATGGCAAGAGGTGAT
GATGCAAAGCCATCCTTTGGAAGAAAGAAAGATGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:615588..624557 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 124-318:8776 |
| Aaloc | 28-123:8531 |
| Aaloc | 1-24:1 |
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