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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000033_pilon:1245663..1249401- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039496 ID=XLOC_039496|Name=XLOC_039496|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3739bp|location=Sequence derived from alignment at sc0000033_pilon:1245663..1249401- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATGAAAGATGGTTTTGGTACAGGCTTTTTCATAAACACAACACACGG
AACTTCTCCGACAACATTCTAATTTCAAAATGGCGTCATCGAGCGGAGGA
AAAACCATGTGTGCTGTGACAGAGCTAGAATTTCCCTCACATTTGGATGC
AGAAATCAGTACATTGTGTATCAAACAGTTAAATGATGAGAAGATTATTG
TTGGACATGAAAACGGTATCTATATCACTTCTATAGGTACAACAGACTCT
GTAAATATTGTGAAAAGCTTAGAAGGTTTAGAAGTACCAAGTGTTTTTGT
AGATGAAAACTCTGATGGCAATATATTTTATGCTGCTTCTGAAAGTAATG
TATATAAATTTGACATTCGATGCCCACTTCAAGATGTTCATTGTTTCAAG
GATAACACAGATGAAATTAATTTCATAACAATGAATGATAAAGGATTCTT
GGCATCGTGTGATGATTCTGGGGAGTGCAAGATCTTTGATACAAGAAAAG
GCACTTTGTATCGCACATTAAGAAAACGACATAAAAATATCTGTAGTAGT
GCTGCATTTCTTACGACAAGAGCTGATGATATTGTTACTGGAGGACTTGA
TTCACAAATGATTGTTTGGAACCATGCGGTGGTGCGATTTATTCAAGATA
TAAACACTCAGGAGATTCTTCAGAAGTTAGGTGATAACTCTGTCAATATG
TTTAATCCACCAATGGTCAATGCATTAAGTCTATCACAAGATGGAAGATT
GCTAGCCTCTGGCCTTGGTAAGAACATAGCTTTCTAGTCTACTTTGCCTT
TATACCAAAATGTTAGGAGTTGAAAAATATCTCGGTTCAGTCTGTTTTCT
TGATATATTTGAAATCAAAGAAATTTACCTGCGTGAACCAATTTTTATTG
GTGAAAACCGTTTTTATTAGAAAACTGTGAAATTGTGCAAATTCCAAACT
GTATAAACCTGACATTATCTAGTATTTAATCACTAAGGCACGGATTTTTC
ACTTACATCCTTAGGATCCTGAGCATCCTCAGGCTTTTAGAGGATATCCT
CAGGATCCTCTGTTTTGCCTTGGATACAGCTTGATAAAACATCAATATTT
TAATTTCCCAAGGATCCTGAGCTAACTCATGATCCTCATTTTTTATCTCT
TCTTCTCTAAATATGAACCTCAGGATCCTTTGGGTCCTCAGGATATTGCG
AGGATATCCTCAGGATCCTCTAGAATTTATTTTACGTCAATAATTATTTT
TTATTAAAGAAAGAGAATCTTAGGATCCTTAGGATCCTCAGGCTTTCCCA
AGGATATCCTCAGGATCCTCAAAAAAAAATTTGACGTCAATTATTTCCCA
ACTCAATCCTAAGGATCCTAAGGTTCATATTTTGAGAAAAAAAGAAAAAA
AGTGAGGATCCTCAGGTTATCCTCGCAAAAGCCTGAGGACCCTAAGGATC
CTAAGATTCATATTTTGAGAAAAAAAGAAAAAATGTGAGGATCCTCAGGT
TATGCTTGCAAAAGCCTGAGGACCCTAAGGATCCTAAGGTTCATATTTTG
ATAAAAAAGAAATAAAAACGAGGATCCTCAGGATATCCTAGCAAAAGCCT
GAGGACCCTAAGGATCCTAAGGTTCATATTTTGAGAAAATACAAAAAAAG
GTGAGGATATCCTCAGGATCCGGAGGATAAATGTGAAAAATCCGTGCTTA
GCTGGGAATGCAAAAACTAAACAATTTAAGATATTGTGGGAAAAAAAGAG
CAAAACCCCAGACCTGCCAACTTGAGATGTTCATTTTGCGTGAGATAAAA
ATTTCAAAGCAGAATTCGAATTCATAACCCAGTTTTTCCGGTTTTCCGAT
ATCGGAAATCGGGAAATTTTTCCAAAAATTAGAAAATCGAGGAAAATATT
TTTCGAAAATTGGAATATCGGGGAAATTTTTTTCCAAAAATCCGAAAAAC
AAGGGAAATTCTTCTCAAAATTAAAAAATGCGTGAGAAATCAAACTTTTC
AAAAATTGCATGAGACAGTCTGGAAATGCGTGAGTCTCACTCTCAATGCG
TTAGAGTTGGCACCTCTGCCAGAAAACTAGCAATTTTGGCAGGACATTTA
CTTGTGATTTAGAATTTTTGGGTTCATCTAAAAAGCAGGGTAGCCAATTG
GTCTAGGTTGCAGGGTAGCCATGTATTTCTCAGACCAGAGTAAAAAGATT
AAAACTTTTTATATGATGATCCTTATTGGAGCCAGGGGGTAAAATTTTGA
AAAATTATTATAATTACAGTTTTCATTTACACTTTTTTTAAATAAGAGCC
ACTAAATTTTGAGGAGGCTTGGCTGTTTTTATTTTTTTGGCACTTGGAGC
CTCAAATTGTTCTTATCATGTTCTTATTTATTTATAGGGTGTAATTGAGG
TATTTTTACTACTTTGATCCCTTAAATTGCTTGAAATTGAGTAATTTTAG
GCTCAGCATCGTTCTTAAATTGTTCTTATTTTTAATCAATTTTGTTCTTA
TAAAATTGTTCTTATAAAATTAAGTGTAAACTATCCTTAGATGTTATGAG
ATTACCCATTGTTCTGTAATTGAGGTATTTTTACTACTTTGACCCCTTAA
ATTGCTTGAAATTGAGTAATTTCAGGCTTACCATTGTTCTAAATTCTTAT
TTTTAATCAATTTTGTTCTTATAAAATTGTTCTTATAAAATTAAGTGTAA
ACTATCCTTAGATGTTATGAGATTACCCATTGTTCTGTAATTGAGGTATT
TTTACTACTTTGACCCCTTAAATTGCTTGAAATTGAGTAATTTCAGGCTT
ACCATTGTTCTAAATTGTTCTTATTTTTAATCAATTTTGTTCTTATAAAA
TTGTCCTTATAAAAAAAGTGTATATTATTCTTTGGTGTTATGAGATTACC
CATTGTTCTGATTTTCATTTTAAGTCTTTGTTAGAATGTTGGAATCCATA
AATTTTCTGTACTTTTAACCATAAAAAATATTCTGGCCTGTATTTTTTCA
ACGTGTGAGAGGAAGAAAGACAAGATGGTGACTGCACTCAGTAAACAGAT
GTAGATTTTAAAGTATATCCAGATATAATTGGCAGTGGAAACAAGAATGC
CTGTAATTTCTGATAGTCTGATACAATTGTGGAGATTCTTTTTGCTTGTT
TAAGAGAATCAAAAGCGCTATATTTGAATGTAATTTTGGTTGAAAAATTT
GCAATTTTTAGCGATTACATTTGCAATTAAGAAAATTGAGCTTTTTTTCT
ACTTATATGCTATAACATTCACTAGTGTAAAAATGATATATTTCCAAATT
TGCTTCTTTTAACGATTTTTAATTTTTCTTATTTTTCGTAGGGAACGGGT
CATTGCAATTGTTTCATGTATTAAAAGGAAAGCGGGCTTTAGCACCATCG
CTACTGATCAATCAACATGGGAGTACTGGAATAACCTCGCTCGATTTCAT
CAAAACTTCCTACTCTTATATTCTTGCCTCTGGTGGGAACGATATGGAGA
TAAACTTATGGAGATTGCCTCCAATTGCTACAAATGCAAAAGGTAAACAA
TTGGTACCAGAGAATGAAATGGCTCTTGAGCAAGACGAAATTATGAAGTA
TCAAATTTATCAAACAAAACTACAAACGAAAATTAATACCCTTGAATCGA
TGAGATTGAACTCCAGGGATTTCTTGTTAGTGGGTGATCAAACACCTGTT
TTAAAAATGATAGATGTTACTGATCTGCTGGAAATTTGA Coding sequence (CDS) from alignment at sc0000033_pilon:1245663..1249401- >XLOC_039496 ID=XLOC_039496|Name=XLOC_039496|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2330bp|location=Sequence derived from alignment at sc0000033_pilon:1245663..1249401- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATGAAAGATGGTTTTGGTACAGGCTTTTTCATAAACACAACACACGG
AACTTCTCCGACAACATTCTAATTTCAAAATGGCGTCATCGAGCGGAGGA
AAAACCATGTGTGCTGTGACAGAGCTAGAATTTCCCTCACATTTGGATGC
AGAAATCAGTACATTGTGTATCAAACAGTTAAATGATGAGAAGATTATTG
TTGGACATGAAAACGGTATCTATATCACTTCTATAGGTACAACAGACTCT
GTAAATATTGTGAAAAGCTTAGAAGGTTTAGAAGTACCAAGTGTTTTTGT
AGATGAAAACTCTGATGGCAATATATTTTATGCTGCTTCTGAAAGTAATG
TATATAAATTTGACATTCGATGCCCACTTCAAGATGTTCATTGTTTCAAG
GATAACACAGATGAAATTAATTTCATAACAATGAATGATAAAGGATTCTT
GGCATCGTGTGATGATTCTGGGGAGTGCAAGATCTTTGATACAAGAAAAG
GCACTTTGTATCGCACATTAAGAAAACGACATAAAAATATCTGTAGTAGT
GCTGCATTTCTTACGACAAGAGCTGATGATATTGTTACTGGAGGACTTGA
TTCACAAATGATTGTTTGGAACCATGCGGTGGTGCGATTTATTCAAGATA
TAAACACTCAGGAGATTCTTCAGAAGTTAGGTGATAACTCTGTCAATATG
TTTAATCCACCAATGGTCAATGCATTAAGTCTATCACAAGATGGAAGATT
GCTAGCCTCTGGCCTTGGAAATGAAAGATGGTTTTGGTACAGGCTTTTTC
ATAAACACAACACACGGAACTTCTCCGACAACATTCTAATTTCAAAATGG
CGTCATCGAGCGGAGGAAAAACCATGTGTGCTGTGACAGAGCTAGAATTT
CCCTCACATTTGGATGCAGAAATCAGTACATTGTGTATCAAACAGTTAAA
TGATGAGAAGATTATTGTTGGACATGAAAACGGTATCTATATCACTTCTA
TAGGTACAACAGACTCTGTAAATATTGTGAAAAGCTTAGAAGGTTTAGAA
GTACCAAGTGTTTTTGTAGATGAAAACTCTGATGGCAATATATTTTATGC
TGCTTCTGAAAGTAATGTATATAAATTTGACATTCGATGCCCACTTCAAG
ATGTTCATTGTTTCAAGGATAACACAGATGAAATTAATTTCATAACAATG
AATGATAAAGGATTCTTGGCATCGTGTGATGATTCTGGGGAGTGCAAGAT
CTTTGATACAAGAAAAGGCACTTTGTATCGCACATTAAGAAAACGACATA
AAAATATCTGTAGTAGTGCTGCATTTCTTACGACAAGAGCTGATGATATT
GTTACTGGAGGACTTGATTCACAAATGATTGTTTGGAACCATGCGGTGGT
GCGATTTATTCAAGATATAAACACTCAGGAGATTCTTCAGAAGTTAGGTG
ATAACTCTGTCAATATGTTTAATCCACCAATGGTCAATGCATTAAGTCTA
TCACAAGATGGAAGATTGCTAGCCTCTGGCCTTGGGAACGGGTCATTGCA
ATTGTTTCATGTATTAAAAGGAAAGCGGGCTTTAGCACCATCGCTACTGA
TCAATCAACATGGGAGTACTGGAATAACCTCGCTCGATTTCATCAAAACT
TCCTACTCTTATATTCTTGCCTCTGGTGGGAACGATATGGAGATAAACTT
ATGGAGATTGCCTCCAATTGCTACAAATGCAAAAGGTAAACAATTGGTAC
CAGAGAATGAAATGGCTCTTGAGCAAGACGAAATTATGAAGTATCAAATT
TATCAAACAAAACTACAAACGAAAATTAATACCCTTGAATCGATGAGATT
GAACTCCAGGGATTTCTTGTTAGTGGGTGATCAAACACCTGTTTTAAAAA
TGATAGATGTTACTGATCTGCTGGAAATTTGAGGAACGGGTCATTGCAAT
TGTTTCATGTATTAAAAGGAAAGCGGGCTTTAGCACCATCGCTACTGATC
AATCAACATGGGAGTACTGGAATAACCTCGCTCGATTTCATCAAAACTTC
CTACTCTTATATTCTTGCCTCTGGTGGGAACGATATGGAGATAAACTTAT
GGAGATTGCCTCCAATTGCTACAAATGCAAAAGGTAAACAATTGGTACCA
GAGAATGAAATGGCTCTTGAGCAAGACGAAATTATGAAGTATCAAATTTA
TCAAACAAAACTACAAACGAAAATTAATACCCTTGAATCGATGAGATTGA
ACTCCAGGGATTTCTTGTTAGTGGGTGATCAAACACCTGTTTTAAAAATG
ATAGATGTTACTGATCTGCTGGAAATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000033_pilon | genome | sc0000033_pilon:1245663..1249401 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 769-1164:397 |
| Aaloc | 37-765:3703 |
| Aaloc | 1-36:3740 |
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