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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000033_pilon:1239303..1241661- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039495 ID=XLOC_039495|Name=XLOC_039495|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2359bp|location=Sequence derived from alignment at sc0000033_pilon:1239303..1241661- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAATTTCATCTTTGTGGTTATATTGTTGGTTTCTGTTGTTGAAAT
TGCCGAATGTGGTCGTTATCTCCAACACCGGCGTAAGTCATGAAATATTT
TCAGGGTATTTTTTAAACTCGTATAATTAAACTTGTATAATCGTTAAAAT
CGATGGAAAAAAAGAGACCTTTCTGTGAATTCTTCTTTTTTTGTGAATCT
TTTTTTTACAAAACCTTTTTAAAGAATCAATTCATTGAAAACAGAAATTA
ACCTTACCAGTGATTGATCCTTCTTTTTTATAGGAAGATGTCCAGAGAAA
TGTTCGAAGCGTGTAGCATTTGTTTGCGGTACTGATGGAAGAGCATTTTT
AAATATGTGTGTTTTCAAACGAGAGCAATGCAAAAATAGTCAACTTAAAC
TTCGAAATTATGGCCCGTGCGAAGGTATGTTACTCTCTTATTATGGTACC
ATTTTAAATTTAGAATTAGGTCCAGTGGTTTTTAACAGAGCCCAAGTTTC
GATCAAAATTAATTAGGGAAGTTTTGTCATTTTCAAATAATGAGTTGGGA
GTGCCAGATCTTTTATAAATGAGATAAAATCTTTTTATTATCCACATATT
TTTTGCTTTCGTTCTTTCCTCATGGCAGTGTGATCCAGTTACATTGAAAA
CGATTTTGTTTTTACTTTTACATTGAGAATGAAACTTGAAATGTTAAACA
AGAGTTTGAACTAAACCTCAATACAATCTTTGACGCTTTTTAGAAGTCTA
CGCAATCATCGAGGGGTCGCATTTTCAACCATTGTGTACTGCAGACAATG
AAAATCACTCTTCGAAACAGTTTTTGGACATCCATGCTTGTATTACAAGA
AAATACAAACAAGTTAAATGGTATGGTGGCTATTGTGGTAAGTCTAGGGA
CATTGAGTTTAAAACCCTAAGGCGTCTAAAGGAGAAATTTTTTCAAAACC
TTTCTCAAACAAGAAAAAGTGAAGCCTTAAGTTTTGCGCCGCATTTAAAA
TAACAGATGGAATCTTGCCCTTTCTTTGTTTTCGCGCGATATAAATTTTT
TCAAAATCTGCCGATGGATTTTACTTTAAATCTGGTGTTTGTGTGAAAAC
CAGACAAGTCACGTTTTGGGATGGAAAAAAGTGGCTTCATTTCCTATCCA
AGAGTTTCAAATCTCTAGCTTCTTCGGGGCTTGCTTATTTAATCAACGGT
CAGGGAGAGTATACTTAGAATTTGGGAAGAGTAATATCCGCTTATCCAGG
CTTATCACCGAAAATCCTCAGCTTTTCTGGTACTGGTCTTTGTTTTGAAT
ATTATTTCTTAGACTCCGAAGATCCTGGGTTTTTTATGAATTTTTTATGC
ACTAAACTAGAGTCTATTCCTGACTGAATTTTGGTGTCTTATAATTATCC
AGTGAAGTAGACTAGAAAAGCACTTGACAAGGTTACTTTTGGAAGAAAAT
ACCAAAATTCCTTTTTCTGGTATTTGGGATTTGGATGTTTTTCTTTCAAA
ATGGCCTTGTCAAGTGCTTTTCTATGCTCCTAGTCTACTTCACTGAACTC
GGTCTAATCAAAAATTGTCAAAAAGCAAAATTCAACCTGACGTAGACTCT
AGCCTGTTGGACCCCGGGCTATTTGTCAGGCTATTTGTGCATTTGTACAT
GTTTGCCTTATAGATACGAAGACTCCATTGAGATTTCCAACAAAACCAAA
AGGATTGTTGGATTGCCCAGATGTTTATGACCCTGTGTGCGGTTCTGATG
ACGAAACTTACTCCAATCAATGTGTCTTCGATAAACAGAATTATATCTTT
GCTGGGAAGCTCAGTGTCAAATGGCATGGGTACTGTCGATGTAAGAAATC
TTTAAACAAAACTCGTCTTAAATTATTCAAAAGCCAATGCTTAAAACTTC
CTATGAAAATAGAAAATTAGACATGGCTCGCTCGCTTTGAAAACTTAGGC
CTTTACATTGCTGGAAAATGGACAAAAAATTAATGAACTCAAGCAAAATA
ATATTATACAGTAATGAATATTTTGAATAGTCGTCTTTAAGAAACCGTTA
GGGGTGCAACCCCCCCCCCTAGTTGCTACGGCACTACAGTATAAAATGTT
TTCAGAGCTTACTGTATAATTTCTTTCACAAATTTTGGCAACATTTGGAT
GCTCGTGTGGGTGAATAAGCACAATATAAAATGTTATTTCTCTTTCAATT
GACTTAGCTGTTTATTCTGTGGTTGTGGGTTTGGAAGAAGAATTTCAACT
GGTTTGCGCTTCTGATGGAAACACATATTCAAGTTTGGTCGCCGTTCAAA
TAGCAAAGTGTCAAAATTACAGACTAAGAGTTGTTAGTCACGGACCATGC
AAAGAAAGG Coding sequence (CDS) from alignment at sc0000033_pilon:1239303..1241661- >XLOC_039495 ID=XLOC_039495|Name=XLOC_039495|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1392bp|location=Sequence derived from alignment at sc0000033_pilon:1239303..1241661- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAATTTCATCTTTGTGGTTATATTGTTGGTTTCTGTTGTTGAAAT
TGCCGAATGTGGTCGTTATCTCCAACACCGGCATGAAGAATTTCATCTTT
GTGGTTATATTGTTGGTTTCTGTTGTTGAAATTGCCGAATGTGGTCGTTA
TCTCCAACACCGGCGAAGATGTCCAGAGAAATGTTCGAAGCGTGTAGCAT
TTGTTTGCGGTACTGATGGAAGAGCATTTTTAAATATGTGTGTTTTCAAA
CGAGAGCAATGCAAAAATAGTCAACTTAAACTTCGAAATTATGGCCCGTG
CGAAGGAAGATGTCCAGAGAAATGTTCGAAGCGTGTAGCATTTGTTTGCG
GTACTGATGGAAGAGCATTTTTAAATATGTGTGTTTTCAAACGAGAGCAA
TGCAAAAATAGTCAACTTAAACTTCGAAATTATGGCCCGTGCGAAGAAGT
CTACGCAATCATCGAGGGGTCGCATTTTCAACCATTGTGTACTGCAGACA
ATGAAAATCACTCTTCGAAACAGTTTTTGGACATCCATGCTTGTATTACA
AGAAAATACAAACAAGTTAAATGGTATGGTGGCTATTGTGAAGTCTACGC
AATCATCGAGGGGTCGCATTTTCAACCATTGTGTACTGCAGACAATGAAA
ATCACTCTTCGAAACAGTTTTTGGACATCCATGCTTGTATTACAAGAAAA
TACAAACAAGTTAAATGGTATGGTGGCTATTGTGATACGAAGACTCCATT
GAGATTTCCAACAAAACCAAAAGGATTGTTGGATTGCCCAGATGTTTATG
ACCCTGTGTGCGGTTCTGATGACGAAACTTACTCCAATCAATGTGTCTTC
GATAAACAGAATTATATCTTTGCTGGGAAGCTCAGTGTCAAATGGCATGG
GTACTGTCGATATACGAAGACTCCATTGAGATTTCCAACAAAACCAAAAG
GATTGTTGGATTGCCCAGATGTTTATGACCCTGTGTGCGGTTCTGATGAC
GAAACTTACTCCAATCAATGTGTCTTCGATAAACAGAATTATATCTTTGC
TGGGAAGCTCAGTGTCAAATGGCATGGGTACTGTCGATCTGTTTATTCTG
TGGTTGTGGGTTTGGAAGAAGAATTTCAACTGGTTTGCGCTTCTGATGGA
AACACATATTCAAGTTTGGTCGCCGTTCAAATAGCAAAGTGTCAAAATTA
CAGACTAAGAGTTGTTAGTCACGGACCATGCAAAGAAAGGCTGTTTATTC
TGTGGTTGTGGGTTTGGAAGAAGAATTTCAACTGGTTTGCGCTTCTGATG
GAAACACATATTCAAGTTTGGTCGCCGTTCAAATAGCAAAGTGTCAAAAT
TACAGACTAAGAGTTGTTAGTCACGGACCATGCAAAGAAAGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000033_pilon | genome | sc0000033_pilon:1239303..1241661 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 547-696:151 |
| Aaloc | 370-543:695 |
| Aaloc | 226-366:1615 |
| Aaloc | 85-222:2075 |
| Aaloc | 1-81:2360 |
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