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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000033_pilon:1227631..1229990+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039492 ID=XLOC_039492|Name=XLOC_039492|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2360bp|location=Sequence derived from alignment at sc0000033_pilon:1227631..1229990+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCAGCGACTATGACGGAACTGTCTCAGGTATTTATCAATTGAATTCGAT
GCGTCAACACGCTGTGTCACCGTCTCCTGGTATTGAGGAGATAACAAAGG
CAATGCCCGGTGTACGGAAATGTTTATCTCCTGAATGTGGATGTTGTCAA
CGGAGTGATGTATTGTTGAGAGTCAACGACGAGCTGTTACAACACAAACT
TCAACTTGAGGAGCAGAATAGAAACCTGTTGGAGGAAATTCAAGTATCGA
GAAGATTTTATCAGGGAACATTGGCAGATTTGACTGCGCAACTTTCAATA
GGTAACGGGTTTcccgttttttataagcaaatgtctacccctatatcagg
ctcgcattatgcttagcattctattgttcttaaaaaatagaGCTactgtt
taggtaccaaaaatgagcctgcatatgcttataaacgttgtACTAAAAAC
ATTTACCTCTCCATGCTTAGGATCCTACTTCTAATATTTGTTTTCCTATC
AGAGGAATTTTAACTTCAACTTTTTCTAGACAAGTAGGCGACCGACAGAG
GGCCATTTAAAACGGTCGTATCtcgacatgaaattttctaattttaaagg
tgtttctaacttttataatttaacataaattttttttacagcgGAGAATC
GAATCAAATATCTTCAAGAAGTGGTGAATACACAAGAAGAAGCTCTCTCC
TCTCTAAATAAGGTATGAAGAAGGAGTTTGTCGTGTAAGATTTCATCTGC
TAACTCTAGAGAGTTTGTGCTTTTGATAGCAACTTTTACAGTTAGCCAAT
AATATTAAggccatgttcgcacgtgacggttcatTCAAGAAGTCTTTTCT
AACCAATTgaatggcttcattccgtttcgAGCGAAActgaaccgtcacgt
gcgagcATGTTCGATaaaaaataagcatacctaaaaactgaaatgcaaaa
aaaattcgtgcagcttttctaaaacgctgactTTTTTCagggttactttt
aaagctgtttgagctttcttagaccaaagatttttACCTGCGGcgccaaa
ttacaaagaaaactttcattctTTGTACCGGATCAATCTTCCAACTTAAA
AATTCGAGATTTGCATGAACCCaaaaaaaTCAACAagtctaagcatataa
ataatgataatttaaggctgaaaatgagattttgctaagcatattgagcc
TCAACCCGATTTTCCCgcttatgcttataaaaaaaagagtgtatctGGTT
GTTAAATTAACATTCCTTCGGCTTAATTTCATAGGACAAATCTCTTTCCT
CGCCAAATATATATCAAAATAACGGGACGAACGCTGGACATTTTACTCAT
CCAAACGGAAACGTCGGTGCAAATCGTCTTACCAAAAGTGTCCCAAACTC
ACCGCGCGGTCTTCCACTATCGAACGATTCTAACCGCTCCACCACTTCAT
CAACGACGTCTAGTGTGACGTCAGAACCTCCGCGTACTCGattgaatctg
aaaaatatcgtcAAATTTAAAGAGGTTTGGTCAAAAATTAGAATCACTAA
CTAACCGTCACTTTATCCTTTTTTcattcgggggggggggctgagaGTTA
CAAGGGTTGGAGAATGTTACGCTTTGAGGGACTTTAGATAGTAATTTCGT
TGGAATTACGAAAGAATTTTGTGTCCTTTTTGATGAGTGATAGTTTTTGC
ACCCATAGAAAGACTTCAGAAGGCGAGaaaaaaaCCCGCTTCTTTTTGCA
CTTGCTACAAACTCTTTAGCTTTAAAAACCCTCTcaatctagaaaaaaat
caaatagaatCAACAACAAGCGACAGTTCTTCTGCATCCTTAACTATATT
TCTtattcgtgttttttttttcagcaattAATGGAGCGTAACCAGACATT
GAAAACTGACATTGAACtgttgaaattcaacaaaacagACGTCCCAAAGA
CTTCCTCTGTCTCATCATTGAATAATAAAAAGGTATGAAGAATTTCATCC
TCGATATAGTTAGAGTTTTCAATCATAAATTATCGCTCCAAAGTTGGTCG
TCttttttttCATCAGCAACTGTTAAATTCCATGATCTTTTTGTACAATA
TGCcttaaagaaacttttttttgagaaCTAGCTAACGAATTAAtgtgatt
ttttgtttaaataaaACACTcatttgtagacaaaaaatcaatttaccATC
AAAAAGGAGCTCACATTGGCTCATTTctattttcgttcttttttagGAAT
TACCCGCCATAAAGAGCAATCGGCGCTCTGATGCCGGAGGCAAAGGCGGC
TCAAATCAAACCACTCCCCAATCCTCCTTTGACGCCAGTGAAGTTTCTTG
TAAGAAATGA Coding sequence (CDS) from alignment at sc0000033_pilon:1227631..1229990+ >XLOC_039492 ID=XLOC_039492|Name=XLOC_039492|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1668bp|location=Sequence derived from alignment at sc0000033_pilon:1227631..1229990+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCAGCGACTATGACGGAACTGTCTCAGGTATTTATCAATTGAATTCGAT
GCGTCAACACGCTGTGTCACCGTCTCCTGGTATTGAGGAGATAACAAAGG
CAATGCCCGGTGTACGGAAATGTTTATCTCCTGAATGTGGATGTTGTCAA
CGGAGTGATGTATTGTTGAGAGTCAACGACGAGCTGTTACAACACAAACT
TCAACTTGAGGAGCAGAATAGAAACCTGTTGGAGGAAATTCAAGTATCGA
GAAGATTTTATCAGGGAACATTGGCAGATTTGACTGCGCAACTTTCAATA
GGTCAGCGACTATGACGGAACTGTCTCAGGTATTTATCAATTGAATTCGA
TGCGTCAACACGCTGTGTCACCGTCTCCTGGTATTGAGGAGATAACAAAG
GCAATGCCCGGTGTACGGAAATGTTTATCTCCTGAATGTGGATGTTGTCA
ACGGAGTGATGTATTGTTGAGAGTCAACGACGAGCTGTTACAACACAAAC
TTCAACTTGAGGAGCAGAATAGAAACCTGTTGGAGGAAATTCAAGTATCG
AGAAGATTTTATCAGGGAACATTGGCAGATTTGACTGCGCAACTTTCAAT
AGcgGAGAATCGAATCAAATATCTTCAAGAAGTGGTGAATACACAAGAAG
AAGCTCTCTCCTCTCTAAATAAGcgGAGAATCGAATCAAATATCTTCAAG
AAGTGGTGAATACACAAGAAGAAGCTCTCTCCTCTCTAAATAAGGACAAA
TCTCTTTCCTCGCCAAATATATATCAAAATAACGGGACGAACGCTGGACA
TTTTACTCATCCAAACGGAAACGTCGGTGCAAATCGTCTTACCAAAAGTG
TCCCAAACTCACCGCGCGGTCTTCCACTATCGAACGATTCTAACCGCTCC
ACCACTTCATCAACGACGTCTAGTGTGACGTCAGAACCTCCGCGTACTCG
attgaatctgaaaaatatcgtcAAATTTAAAGAGGACAAATCTCTTTCCT
CGCCAAATATATATCAAAATAACGGGACGAACGCTGGACATTTTACTCAT
CCAAACGGAAACGTCGGTGCAAATCGTCTTACCAAAAGTGTCCCAAACTC
ACCGCGCGGTCTTCCACTATCGAACGATTCTAACCGCTCCACCACTTCAT
CAACGACGTCTAGTGTGACGTCAGAACCTCCGCGTACTCGattgaatctg
aaaaatatcgtcAAATTTAAAGAGcaattAATGGAGCGTAACCAGACATT
GAAAACTGACATTGAACtgttgaaattcaacaaaacagACGTCCCAAAGA
CTTCCTCTGTCTCATCATTGAATAATAAAAAGcaattAATGGAGCGTAAC
CAGACATTGAAAACTGACATTGAACtgttgaaattcaacaaaacagACGT
CCCAAAGACTTCCTCTGTCTCATCATTGAATAATAAAAAGGAATTACCCG
CCATAAAGAGCAATCGGCGCTCTGATGCCGGAGGCAAAGGCGGCTCAAAT
CAAACCACTCCCCAATCCTCCTTTGACGCCAGTGAAGTTTCTTGTAAGAA
ATGAGAATTACCCGCCATAAAGAGCAATCGGCGCTCTGATGCCGGAGGCA
AAGGCGGCTCAAATCAAACCACTCCCCAATCCTCCTTTGACGCCAGTGAA
GTTTCTTGTAAGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000033_pilon | genome | sc0000033_pilon:1227631..1229990 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 721-834:2247 |
| Aaloc | 613-720:1875 |
| Aaloc | 373-612:1285 |
| Aaloc | 304-372:644 |
| Aaloc | 1-300:1 |
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