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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1927288..1932132+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039489 ID=XLOC_039489|Name=XLOC_039489|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4845bp|location=Sequence derived from alignment at sc0000023_pilon:1927288..1932132+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAATTGCGATTCCCCAATGttggctatgggtaattcctttgttcttttg
ctattttcttttattCTATGTGATGTAAAGacgattctttctttttttat
ttcttcatgttCGCCAATCTGAGGAGTACACGTAGGAAAGCTCATGAAAC
ctgcaaacttaattttgagtttAGCCTTTTCCCAAGATTGGCAAACAATC
CATGTTGACCACTTACAgcttttctctttgatcttttgttggtttttttt
gttaatttcttgCATCATCAATGACttcttgaaatggaaacacACAGTTT
TTACCAAGTTGCCTATATAGGACAGCACATTCTCAAATCCGATGCCCTGA
ATGACTGCCagtggaaaaaatttcaatgattacaAAATTCCctctcaaaa
tttaatgataAACTATGGTTTTGACCTTTCTATTGTTGATATCCAGGCAT
TTATTCAGACCCTgggctaaaaatatttttcctaaaATAGGATttgagat
gaaaaaaaaattagcagaAAATAGTGACATAACTCACCAAATTCTTTAAT
TCTTTCTCTTAGCAACCGGGCAGGAATATTGTACCTGCATCTTTGAGTGC
AACTGGAGCACAACTCCATGCGATGCCACATCTTGTTACTAATTACATGA
CAGTACCATTGAGTCAAGCCAGGGGTCAACACACCTTTCAAGCACACATT
CCTGTAGGAATCAGAGCAGCTACAGCTATTGCTCCCTCAAGAGCAAGTAT
TGCTACTCAAAGGTTGCAAACATTAAAACCAACTAATATCACAAACCAGG
TGAGGCTTTTAAAGTATATCAATATAGACATATTGATTGTAAAGGCacag
tttatttttttcttttgtttgcttTAAAACAATTTCAAGTGAACAATATA
TAacctttaaaataatcaaattcttACCTTAATAAGACTTCTACTGAATT
GCTTATACtatctttttctaaatttcaaagacgatttcaaacatattttt
attcttttaattcAGATTCAACTACCATTGGCACCTCTTTCAAGTATTCC
GATATTGCCGCCATCAGTTGCAGCCAATAACCGTACAGGTTCTCCAACTG
TGACCACCCATGGTATGACATCAGAATCTCGACATGGATCTAGGACACAT
GATTCACACAGTGCTCTGCGTGGAAATATTCAAGCTACAAGCCAAACAGC
AACCATTCAAGTTGTTGCATCTGGAAATCAAGTTCATCTCCCAACATCGC
TTTTGACTACAAAAAGCTCATCTTTCAATACAGCAGTGCCTAATATGTTG
AAGATTGGTGTCAGCTCTCATACAAATGCAGCTTCTGTAACTCCCTTACC
AGCATCTGGTTTCAAGCTTGCTGGGATTGGTAGGAGTTTTTTCGTTCGAC
TTAAATTTGCTATTCTAAGACATGATGCACTTTTCAAACTATAAATGTTT
GATTATCTTGAGAGGAAACCAGCGCTTATGGTTTGACTCACTAAAAACAT
ACAACTAATCTTTAAGTGAGTTAACTAAAGTGCTCTGTTTTCACCTGATT
CTAGAGTTATGGAATGGCAaaggataaaaaaatatgtagatACCTTAAAT
CTCCTTATTTTAGGGAAAGCGTATCCTGGTGCATCCAGCGTTATCATACC
GTCTGCAAAGCCTGAAGTAAGTTAAAATGTTTATTATCTTATTACATTAA
CCAGTGAATAATGTTATATGTAAATGTACGTTAATGTATAATGTTGAATA
ATGGAAGTATTTACAATTTTACTTCTTTAGGAACATCGTGTTTCATCGTT
CAGTCGGTTCCCAAGTCCACATAGTGTCACAATACCTGCTCATCAGATAC
AAGGCTTGCCTGTGACTACAACCATTGCAAATAGCCAAAGTCTCACTGTA
ACTACTTCGACCGAAGCCAGGTaagattaaaaattttcttttttaattgt
agCAATGGGTCATGAAATGAAATAGTGCATGAACAGGGGACATCTAGCTC
CCAGGGGTTTTGAACTTGTACCTCCTAATAGCCCAAAATAAGATAATTAC
AAACTGAAACCTACCTCTGTAATTAGAGCAAAATAAAGAACTGTGCTTTT
AACagcttaaatattttcaaaaattaatatatGGGGGGTTTCCTATTCGG
GTCCAtggttggaaaaaattgaaaaataaacaagcagcAGAGGGCTTTTA
TTATTAGACATCTGCCAGCAGTTGTTTCAATAATCAAATTTGCTTAGAGG
ATTTGATAGGTTTAAGCCATGCTTTATATCAACTCCCCAAATATACAAAC
CATGTTAGACCATATCTGTATTTTTGCTAACAGGTCCCATTCAAGCATCA
GTGTGCCTTATCAACAATTACCAACAGCCGCGGCTTATGTTTTTCATGAT
ATTGGTAAGTGAAATCTAGCTATCTAAAAATTCTGTCCTGAAGCAAGCTG
ACTCTCCAAAACTCTAACAACTTTCTTTCCTTGATTTTACaataatgatt
ttcttttttacataatAGGCTCACCACTTGGTCTTCACAATTTCTCCCAT
CAACTTGTACGGCCACAAAACACTTCATCAACAGCAACTGCATTACCCTT
GTTTACTGTGGATTCTTCTCATGCAATCTCTACTGTACCAGTCTCCGTTC
CTGTCACTAAAGGTTTGTTATGAAAAGTACTATCAACTCCTGCTAAGTAT
ctttttcctaacttaattctTTCCCAATTATATTATTTCTATCATTCATT
GCAATACAAATTTAAgcatataccgggtgcaccaaaaaaaagtatacaac
tttgtcgagatattgtgagcttcagaatttaaattttttgttcattcttt
ttttattgtatagaggatactttaacttgaattttgagctatcatacatt
aaatttgaaaaagtagttcgaaagttatttccaaaaaactgacttttttt
ccatgtcgaaatttgaaaaaatcattaaaaacagcaatcacgctataaat
aagacaaaatgacaaaaacacaatttcattgttttttttattcctttttc
tcttatcttatattttatatattttatgtaTGACTGGTGGTGATTATTTC
TCATTATCTTTCTTTTAGGACACTTGCTGGCAACAACAGAAGCATCAGAA
AATTCTAGAGTGGAGTCACTTACAATACATGCAAACAACTCTCTCAACTA
TCAAAACCTTTATCCCAATCTTTTAACTAGCAATATTTCGACCACTTTTA
CAGTTGTCCCCACAACGTCTACAGAACCATCATCAAGGCCTAGTATCTTA
CGCAAACGACATGCTGAAACAACTACACCGTAAGACTTTAAGTATTTCAA
TTGGACGAGCGCTTTGATACATTtcttatttcaaagttttaatcTACTCT
CAGATATCTAATCTGACATCTTTTATGGtgtaagtttttcaaaaatgctt
ggataaAGAAACAAATGGAGGCCATATCAGTCTAAAAAATcagaatttcc
aaaaaacttgCAAGGGACATTTATTAAGCACTTTTTGCTCTTGATATCTA
ACTGAAATAACATAATATTGTGTTTTAGATTTCCTGTACAGCCGACTGAA
AAGGAAAGAATATCGAGCCCCTTAAAAGTTGACCGGCCAAGTGTTCCCAC
CAGACTAATGAGTCCACCTCAGTTAACAaggtaaatatttttcacaGACT
TATAAAAGCCAATAGCtgttaaaaaaatgcaaaatacaactgttgctgaa
aactcttaaaacccataaaaaattgaaagaattttatcaaaatgttgGCG
TACCCCATAAAATAAGATCCACCAAGAGCAACACAGATCACCTATTCTAT
ACCCTTGCACATCTATAATAAATTGAATGTTTTCTTCCAATAGTTAGTTT
TCTTAAGGTACTTAAGATTTTTTATGATGTAATAATTACATAACTGTTTC
AGTGAAAAGCCTGATGTAATGAAGCCAATCAACCACTCTATTCAAAGTAT
TACAGCTGATGTTAAAAGTCCTCCACCTCCAAGTGTCACTTCAATACCAA
CTGCAACGACAGCACCAATAGCTATGATTGAACAGCAACAGCAGAAACTT
CCTCCTGTTCTGACGTCAGCTAATACTGTTACAATGCCATCAAAGATTGC
AATATCTATTCCACCTCTCGTCAATGCAGTACCTAACATCAATAATATTA
ATTCGATGAACTCCTCAATTCCAGAAGCATCACCTAAGAAAAAACCAAGA
AAACAGCACATGTAAGGAAACTCCCTGTCAAATTTTAGGTTTTGCTAAAA
AACAGAGTATTGTTCCAATttatttatcttttcctttCCTGGTATAATAC
TCTCAACATTTGGGAACGATCTTTTGATAAGCTACAAAAATAAGATATTT
TCAAAGTAGAATACTATCTATGATATTAAATTATCAGTCAGATAACTGct
caagattttaaaattatgattCTGTTTACACTTACAGTATCACTACTGAA
GATAAGTATGGTTCTGCACCCATCAATTCGGCCTGTGCAACTGACGAAGA
TGAGGAGTTTTTGAAATCCAATGAAACCATGACCTCGATGAAAGATATAA
CACCACCTAAACTCATACCAGCATCCACCTCATCAAGTAGCGGTCCCTCT
AATCCCAGTATAGCCAAACAGTTGTATGCAGCTAGTCCTATCTTGAATAC
ACATTTAAAACCAATGGAGACCAAGAAAGAGGTGAAGTTAGATTCAAAGC
TGGAATTTAATGATAGATCACAGATCAATGGACTGATCACAGCAGCAGAA
TCTAAAGCAGGTATGATTCTAAGTCAGATGAACATCATTGCTTGA Coding sequence (CDS) from alignment at sc0000023_pilon:1927288..1932132+ >XLOC_039489 ID=XLOC_039489|Name=XLOC_039489|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4038bp|location=Sequence derived from alignment at sc0000023_pilon:1927288..1932132+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAATTGCGATTCCCCAATGttggctatggAAAATTGCGATTCCCCAATG
ttggctatggCAACCGGGCAGGAATATTGTACCTGCATCTTTGAGTGCAA
CTGGAGCACAACTCCATGCGATGCCACATCTTGTTACTAATTACATGACA
GTACCATTGAGTCAAGCCAGGGGTCAACACACCTTTCAAGCACACATTCC
TGTAGGAATCAGAGCAGCTACAGCTATTGCTCCCTCAAGAGCAAGTATTG
CTACTCAAAGGTTGCAAACATTAAAACCAACTAATATCACAAACCAGCAA
CCGGGCAGGAATATTGTACCTGCATCTTTGAGTGCAACTGGAGCACAACT
CCATGCGATGCCACATCTTGTTACTAATTACATGACAGTACCATTGAGTC
AAGCCAGGGGTCAACACACCTTTCAAGCACACATTCCTGTAGGAATCAGA
GCAGCTACAGCTATTGCTCCCTCAAGAGCAAGTATTGCTACTCAAAGGTT
GCAAACATTAAAACCAACTAATATCACAAACCAGATTCAACTACCATTGG
CACCTCTTTCAAGTATTCCGATATTGCCGCCATCAGTTGCAGCCAATAAC
CGTACAGGTTCTCCAACTGTGACCACCCATGGTATGACATCAGAATCTCG
ACATGGATCTAGGACACATGATTCACACAGTGCTCTGCGTGGAAATATTC
AAGCTACAAGCCAAACAGCAACCATTCAAGTTGTTGCATCTGGAAATCAA
GTTCATCTCCCAACATCGCTTTTGACTACAAAAAGCTCATCTTTCAATAC
AGCAGTGCCTAATATGTTGAAGATTGGTGTCAGCTCTCATACAAATGCAG
CTTCTGTAACTCCCTTACCAGCATCTGGTTTCAAGCTTGCTGGGATTGAT
TCAACTACCATTGGCACCTCTTTCAAGTATTCCGATATTGCCGCCATCAG
TTGCAGCCAATAACCGTACAGGTTCTCCAACTGTGACCACCCATGGTATG
ACATCAGAATCTCGACATGGATCTAGGACACATGATTCACACAGTGCTCT
GCGTGGAAATATTCAAGCTACAAGCCAAACAGCAACCATTCAAGTTGTTG
CATCTGGAAATCAAGTTCATCTCCCAACATCGCTTTTGACTACAAAAAGC
TCATCTTTCAATACAGCAGTGCCTAATATGTTGAAGATTGGTGTCAGCTC
TCATACAAATGCAGCTTCTGTAACTCCCTTACCAGCATCTGGTTTCAAGC
TTGCTGGGATTGGGAAAGCGTATCCTGGTGCATCCAGCGTTATCATACCG
TCTGCAAAGCCTGAAGGAAAGCGTATCCTGGTGCATCCAGCGTTATCATA
CCGTCTGCAAAGCCTGAAGAACATCGTGTTTCATCGTTCAGTCGGTTCCC
AAGTCCACATAGTGTCACAATACCTGCTCATCAGATACAAGGCTTGCCTG
TGACTACAACCATTGCAAATAGCCAAAGTCTCACTGTAACTACTTCGACC
GAAGCCAGGAACATCGTGTTTCATCGTTCAGTCGGTTCCCAAGTCCACAT
AGTGTCACAATACCTGCTCATCAGATACAAGGCTTGCCTGTGACTACAAC
CATTGCAAATAGCCAAAGTCTCACTGTAACTACTTCGACCGAAGCCAGGT
CCCATTCAAGCATCAGTGTGCCTTATCAACAATTACCAACAGCCGCGGCT
TATGTTTTTCATGATATTGGTCCCATTCAAGCATCAGTGTGCCTTATCAA
CAATTACCAACAGCCGCGGCTTATGTTTTTCATGATATTGGCTCACCACT
TGGTCTTCACAATTTCTCCCATCAACTTGTACGGCCACAAAACACTTCAT
CAACAGCAACTGCATTACCCTTGTTTACTGTGGATTCTTCTCATGCAATC
TCTACTGTACCAGTCTCCGTTCCTGTCACTAAAGGCTCACCACTTGGTCT
TCACAATTTCTCCCATCAACTTGTACGGCCACAAAACACTTCATCAACAG
CAACTGCATTACCCTTGTTTACTGTGGATTCTTCTCATGCAATCTCTACT
GTACCAGTCTCCGTTCCTGTCACTAAAGGACACTTGCTGGCAACAACAGA
AGCATCAGAAAATTCTAGAGTGGAGTCACTTACAATACATGCAAACAACT
CTCTCAACTATCAAAACCTTTATCCCAATCTTTTAACTAGCAATATTTCG
ACCACTTTTACAGTTGTCCCCACAACGTCTACAGAACCATCATCAAGGCC
TAGTATCTTACGCAAACGACATGCTGAAACAACTACACCGACACTTGCTG
GCAACAACAGAAGCATCAGAAAATTCTAGAGTGGAGTCACTTACAATACA
TGCAAACAACTCTCTCAACTATCAAAACCTTTATCCCAATCTTTTAACTA
GCAATATTTCGACCACTTTTACAGTTGTCCCCACAACGTCTACAGAACCA
TCATCAAGGCCTAGTATCTTACGCAAACGACATGCTGAAACAACTACACC
ATTTCCTGTACAGCCGACTGAAAAGGAAAGAATATCGAGCCCCTTAAAAG
TTGACCGGCCAAGTGTTCCCACCAGACTAATGAGTCCACCTCAGTTAACA
agATTTCCTGTACAGCCGACTGAAAAGGAAAGAATATCGAGCCCCTTAAA
AGTTGACCGGCCAAGTGTTCCCACCAGACTAATGAGTCCACCTCAGTTAA
CAagTGAAAAGCCTGATGTAATGAAGCCAATCAACCACTCTATTCAAAGT
ATTACAGCTGATGTTAAAAGTCCTCCACCTCCAAGTGTCACTTCAATACC
AACTGCAACGACAGCACCAATAGCTATGATTGAACAGCAACAGCAGAAAC
TTCCTCCTGTTCTGACGTCAGCTAATACTGTTACAATGCCATCAAAGATT
GCAATATCTATTCCACCTCTCGTCAATGCAGTACCTAACATCAATAATAT
TAATTCGATGAACTCCTCAATTCCAGAAGCATCACCTAAGAAAAAACCAA
GAAAACAGCACATTGAAAAGCCTGATGTAATGAAGCCAATCAACCACTCT
ATTCAAAGTATTACAGCTGATGTTAAAAGTCCTCCACCTCCAAGTGTCAC
TTCAATACCAACTGCAACGACAGCACCAATAGCTATGATTGAACAGCAAC
AGCAGAAACTTCCTCCTGTTCTGACGTCAGCTAATACTGTTACAATGCCA
TCAAAGATTGCAATATCTATTCCACCTCTCGTCAATGCAGTACCTAACAT
CAATAATATTAATTCGATGAACTCCTCAATTCCAGAAGCATCACCTAAGA
AAAAACCAAGAAAACAGCACATTATCACTACTGAAGATAAGTATGGTTCT
GCACCCATCAATTCGGCCTGTGCAACTGACGAAGATGAGGAGTTTTTGAA
ATCCAATGAAACCATGACCTCGATGAAAGATATAACACCACCTAAACTCA
TACCAGCATCCACCTCATCAAGTAGCGGTCCCTCTAATCCCAGTATAGCC
AAACAGTTGTATGCAGCTAGTCCTATCTTGAATACACATTTAAAACCAAT
GGAGACCAAGAAAGAGGTGAAGTTAGATTCAAAGCTGGAATTTAATGATA
GATCACAGATCAATGGACTGATCACAGCAGCAGAATCTAAAGCAGGTATG
ATTCTAAGTCAGATGAACATCATTGCTTGATATCACTACTGAAGATAAGT
ATGGTTCTGCACCCATCAATTCGGCCTGTGCAACTGACGAAGATGAGGAG
TTTTTGAAATCCAATGAAACCATGACCTCGATGAAAGATATAACACCACC
TAAACTCATACCAGCATCCACCTCATCAAGTAGCGGTCCCTCTAATCCCA
GTATAGCCAAACAGTTGTATGCAGCTAGTCCTATCTTGAATACACATTTA
AAACCAATGGAGACCAAGAAAGAGGTGAAGTTAGATTCAAAGCTGGAATT
TAATGATAGATCACAGATCAATGGACTGATCACAGCAGCAGAATCTAAAG
CAGGTATGATTCTAAGTCAGATGAACATCATTGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1927288..1932132 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1663-2019:4489 |
| Aaloc | 1354-1659:3954 |
| Aaloc | 1252-1350:3580 |
| Aaloc | 1042-1248:3121 |
| Aaloc | 898-1038:2521 |
| Aaloc | 826-894:2335 |
| Aaloc | 685-822:1781 |
| Aaloc | 634-684:1616 |
| Aaloc | 268-630:1016 |
| Aaloc | 31-267:563 |
| Aaloc | 1-30:1 |
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