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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000308_pilon:334768..337401+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039485 ID=XLOC_039485|Name=XLOC_039485|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2634bp|location=Sequence derived from alignment at sc0000308_pilon:334768..337401+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCTTCACTGCGACGAAGTattaataaataaatcaaaaaaagtgGA
GCAAGAAACATCATTGAAAAACATTAAACAAGAAGAGATTGATGATGATT
GTACCATTATTCCACCTCCAGAAATCATTCCTGAAACTCAAATAAAGAAG
GAAGCTAACGATTGGCCGGTTTCTATGGAAACTCCATCACACCTTATCAA
TATCAAACTTGAAGATCTTAGTCATGAAGAATATTATGAAAAGAACAATA
ACAATGAACTCGGGAATCAAATTTCTGTTACTCGTGTACAAACTAACCAG
ATCTTAAATCGACAAAAGGAGCAATCAGCTGACCAGGAACTTGATCAAAT
CCAATCTAATATCATGCAAGCGATTCCACCACCAGGAAGTTTACCAGATG
GAGTAACAGGAATGAATCCTTCTTATCCAATTGCACCAGCTTTCACTCCA
GAGCAATTGGCTCTGGCACAACAAATGATGTCACCGACGTCTCCATTTCA
TAACCGACCTTTGGTACCCTTTATGACACAGGATGGTCAAATGATAGTTC
CTGTACCCGTCCCAGTCCCATATCATGCAATGCCGCCGCCACCTCACCAC
CCTGTTGCCGCCCATCCGTACTTTCTCAACGGGGGTATTGTCCGGCAATC
ATTACCTCAAAAAACAAACGATTACAAACTTACCAAGAACGCTGAAACGA
AACGTAAAGACAGACCGTATAAATGTAATCGCTGTGAGAGATCATATAAG
AGACTTAACACACTCAGGCTACACCAAAATGTTCATGACGAAAAATTCAA
ATGTCCTCATTGTGGCAAATGTTTTGACCAAAGAACAAAGTTAATGGAGC
ATTTGCACACACATTCCACCTCAAAAcctttattttgtaatttttgtggT
AAGAATTTCGTACAGAAAGGGAATCTAAGAACACATCAAATCAAATACCA
TGAGGAGGAACTGAAACTTCTCGAGGAAGCTGGACTTACCAACCACGTCC
GAAATTTATTAGAACCTGTCGATAATACCGAGCAACGAAAACGGGTTCTA
CAGCCACCTGAATTCATAACAACCATACCACCAGCTAACCCTAACATGCC
GGCTTCTCGCCATCCAGTCTTCTTCACCAGTGAGCGAAACGTTGCCATTG
AAACTATCCAAAACGGATtctatttcaacaaccaacagtCTAGTAATCCA
GAATCGAGTGAGGACGATTTAAGACCAACCTTTGTCATCGGGAATGTCAC
AAGTCTCCAAAAGAAACATCAACAACTACCAGTTGCCAGCACAAACTCCA
GCAACGTCATTGATCTCACCAGTGACGATAACACAGAAGTGGATCCTAAC
AAAAAGCCTGGAGAGGAACCCTTCGAAGCAGCAATGCAAACAATAAGTTT
AACGTTAGAACGAAAACCTAGTAATGATTTTTCAAACACGGAGCTATTAG
AAAATAACCAGGATCTTTTGGAGGAGATTCAATCAGAGGAACCGCCGATA
TCGGATAGTATCGATTCTGAAGTCATCCGAGCCGAGGATATACCAACAAT
TGAAACGCAAAACAAAAACGAACCAGAAATTACTTCTATAGAAGACATTT
CGTCACCTTCTGGGAGAAAGAAATTATCTGTTTCTGAGGTCATACAAATG
GCAATAAAGCCGAACCATGATGAAACAATTTCTAATGCCATCGAAAGTAT
TAAAACATCAGAAGGCGCTGTATCTAAGCAAACAGAAAACCAACCGATTG
GTAACAATGATAATGAAGTAGCCAATCAAAATACTCGAATTAAGACATCT
GGAACAATCAAAATCTCGATGCTTGATCAAATCCTACCTGAGATTGTTAA
CAAAACaatcaacaaaaagaaaaagattggaAGGACTCCTAAACCTCTAC
TTGAGGTACCAATCTTATCGACAGATTCTCTTGGGAATAATTTCAAATGT
GAGCACTGTGATAAATGTTTTACAGATTATGATTACTTAAAATCACACCA
GAAAATCCACTTGAGAATTTATAAATGTGATAAGTGCGACAGAGATTTTG
AGCTTGAAAAGTCGTTGAAAATGCACCAAAATGTTCACGATGAAGTTTAT
AAGTGTAACGATTGTGGTAAATGTTTTGCACAGAAAGGTGAGCTTTTAAG
TCACGTTCGAGTACACACTAAACCGTTTGTGTGTGGCTTATGTGGCGAGC
GCTTTACACAGAATCGTGATTTGAAAACACACATTCTCTGGCATAATGGT
AAAGAAGTATTTAAATGTAATGAGTGTGAGAAATGTTTCACACAGAAGTC
GTCACTCAGAACTCATATGAATACCCACAATGGTGTCAAACCTTTTAAGT
GTCAGGCATGTGAAAAAACGTTTTCATTGAAAGGTAATCTTCAAAAACAT
CTTGATTTGCATCGGGGACTGAAACCCTTTCAATGTCCAGTCTGCTTCAA
ATGCTTTACACAGAAACATGCTCTGCAAAGACATTTAACTTTACATAATT
TTGCTCAACCCTTCGAGTGTGTAGATTGCAACAAATGGTTCGTAAGAAAA
GACAGTTATAAACAACACTTGGTAGCTTGTAAAAAGATGGTACTATATAA
CACATATGGTAATACTGTAGTTATgcaatcttaa Coding sequence (CDS) from alignment at sc0000308_pilon:334768..337401+ >XLOC_039485 ID=XLOC_039485|Name=XLOC_039485|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5268bp|location=Sequence derived from alignment at sc0000308_pilon:334768..337401+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCTTCACTGCGACGAAGTattaataaataaatcaaaaaaagtgGA
GCAAGAAACATCATTGAAAAACATTAAACAAGAAGAGATTGATGATGATT
GTACCATTATTCCACCTCCAGAAATCATTCCTGAAACTCAAATAAAGAAG
GAAGCTAACGATTGGCCGGTTTCTATGGAAACTCCATCACACCTTATCAA
TATCAAACTTGAAGATCTTAGTCATGAAGAATATTATGAAAAGAACAATA
ACAATGAACTCGGGAATCAAATTTCTGTTACTCGTGTACAAACTAACCAG
ATCTTAAATCGACAAAAGGAGCAATCAGCTGACCAGGAACTTGATCAAAT
CCAATCTAATATCATGCAAGCGATTCCACCACCAGGAAGTTTACCAGATG
GAGTAACAGGAATGAATCCTTCTTATCCAATTGCACCAGCTTTCACTCCA
GAGCAATTGGCTCTGGCACAACAAATGATGTCACCGACGTCTCCATTTCA
TAACCGACCTTTGGTACCCTTTATGACACAGGATGGTCAAATGATAGTTC
CTGTACCCGTCCCAGTCCCATATCATGCAATGCCGCCGCCACCTCACCAC
CCTGTTGCCGCCCATCCGTACTTTCTCAACGGGGGTATTGTCCGGCAATC
ATTACCTCAAAAAACAAACGATTACAAACTTACCAAGAACGCTGAAACGA
AACGTAAAGACAGACCGTATAAATGTAATCGCTGTGAGAGATCATATAAG
AGACTTAACACACTCAGGCTACACCAAAATGTTCATGACGAAAAATTCAA
ATGTCCTCATTGTGGCAAATGTTTTGACCAAAGAACAAAGTTAATGGAGC
ATTTGCACACACATTCCACCTCAAAAcctttattttgtaatttttgtggT
AAGAATTTCGTACAGAAAGGGAATCTAAGAACACATCAAATCAAATACCA
TGAGGAGGAACTGAAACTTCTCGAGGAAGCTGGACTTACCAACCACGTCC
GAAATTTATTAGAACCTGTCGATAATACCGAGCAACGAAAACGGGTTCTA
CAGCCACCTGAATTCATAACAACCATACCACCAGCTAACCCTAACATGCC
GGCTTCTCGCCATCCAGTCTTCTTCACCAGTGAGCGAAACGTTGCCATTG
AAACTATCCAAAACGGATtctatttcaacaaccaacagtCTAGTAATCCA
GAATCGAGTGAGGACGATTTAAGACCAACCTTTGTCATCGGGAATGTCAC
AAGTCTCCAAAAGAAACATCAACAACTACCAGTTGCCAGCACAAACTCCA
GCAACGTCATTGATCTCACCAGTGACGATAACACAGAAGTGGATCCTAAC
AAAAAGCCTGGAGAGGAACCCTTCGAAGCAGCAATGCAAACAATAAGTTT
AACGTTAGAACGAAAACCTAGTAATGATTTTTCAAACACGGAGCTATTAG
AAAATAACCAGGATCTTTTGGAGGAGATTCAATCAGAGGAACCGCCGATA
TCGGATAGTATCGATTCTGAAGTCATCCGAGCCGAGGATATACCAACAAT
TGAAACGCAAAACAAAAACGAACCAGAAATTACTTCTATAGAAGACATTT
CGTCACCTTCTGGGAGAAAGAAATTATCTGTTTCTGAGGTCATACAAATG
GCAATAAAGCCGAACCATGATGAAACAATTTCTAATGCCATCGAAAGTAT
TAAAACATCAGAAGGCGCTGTATCTAAGCAAACAGAAAACCAACCGATTG
GTAACAATGATAATGAAGTAGCCAATCAAAATACTCGAATTAAGACATCT
GGAACAATCAAAATCTCGATGCTTGATCAAATCCTACCTGAGATTGTTAA
CAAAACaatcaacaaaaagaaaaagattggaAGGACTCCTAAACCTCTAC
TTGAGGTACCAATCTTATCGACAGATTCTCTTGGGAATAATTTCAAATGT
GAGCACTGTGATAAATGTTTTACAGATTATGATTACTTAAAATCACACCA
GAAAATCCACTTGAGAATTTATAAATGTGATAAGTGCGACAGAGATTTTG
AGCTTGAAAAGTCGTTGAAAATGCACCAAAATGTTCACGATGAAGTTTAT
AAGTGTAACGATTGTGGTAAATGTTTTGCACAGAAAGGTGAGCTTTTAAG
TCACGTTCGAGTACACACTAAACCGTTTGTGTGTGGCTTATGTGGCGAGC
GCTTTACACAGAATCGTGATTTGAAAACACACATTCTCTGGCATAATGGT
AAAGAAGTATTTAAATGTAATGAGTGTGAGAAATGTTTCACACAGAAGTC
GTCACTCAGAACTCATATGAATACCCACAATGGTGTCAAACCTTTTAAGT
GTCAGGCATGTGAAAAAACGTTTTCATTGAAAGGTAATCTTCAAAAACAT
CTTGATTTGCATCGGGGACTGAAACCCTTTCAATGTCCAGTCTGCTTCAA
ATGCTTTACACAGAAACATGCTCTGCAAAGACATTTAACTTTACATAATT
TTGCTCAACCCTTCGAGTGTGTAGATTGCAACAAATGGTTCGTAAGAAAA
GACAGTTATAAACAACACTTGGTAGCTTGTAAAAAGATGGTACTATATAA
CACATATGGTAATACTGTAGTTATgcaatcttaaATGGATCTTCACTGCG
ACGAAGTattaataaataaatcaaaaaaagtgGAGCAAGAAACATCATTG
AAAAACATTAAACAAGAAGAGATTGATGATGATTGTACCATTATTCCACC
TCCAGAAATCATTCCTGAAACTCAAATAAAGAAGGAAGCTAACGATTGGC
CGGTTTCTATGGAAACTCCATCACACCTTATCAATATCAAACTTGAAGAT
CTTAGTCATGAAGAATATTATGAAAAGAACAATAACAATGAACTCGGGAA
TCAAATTTCTGTTACTCGTGTACAAACTAACCAGATCTTAAATCGACAAA
AGGAGCAATCAGCTGACCAGGAACTTGATCAAATCCAATCTAATATCATG
CAAGCGATTCCACCACCAGGAAGTTTACCAGATGGAGTAACAGGAATGAA
TCCTTCTTATCCAATTGCACCAGCTTTCACTCCAGAGCAATTGGCTCTGG
CACAACAAATGATGTCACCGACGTCTCCATTTCATAACCGACCTTTGGTA
CCCTTTATGACACAGGATGGTCAAATGATAGTTCCTGTACCCGTCCCAGT
CCCATATCATGCAATGCCGCCGCCACCTCACCACCCTGTTGCCGCCCATC
CGTACTTTCTCAACGGGGGTATTGTCCGGCAATCATTACCTCAAAAAACA
AACGATTACAAACTTACCAAGAACGCTGAAACGAAACGTAAAGACAGACC
GTATAAATGTAATCGCTGTGAGAGATCATATAAGAGACTTAACACACTCA
GGCTACACCAAAATGTTCATGACGAAAAATTCAAATGTCCTCATTGTGGC
AAATGTTTTGACCAAAGAACAAAGTTAATGGAGCATTTGCACACACATTC
CACCTCAAAAcctttattttgtaatttttgtggTAAGAATTTCGTACAGA
AAGGGAATCTAAGAACACATCAAATCAAATACCATGAGGAGGAACTGAAA
CTTCTCGAGGAAGCTGGACTTACCAACCACGTCCGAAATTTATTAGAACC
TGTCGATAATACCGAGCAACGAAAACGGGTTCTACAGCCACCTGAATTCA
TAACAACCATACCACCAGCTAACCCTAACATGCCGGCTTCTCGCCATCCA
GTCTTCTTCACCAGTGAGCGAAACGTTGCCATTGAAACTATCCAAAACGG
ATtctatttcaacaaccaacagtCTAGTAATCCAGAATCGAGTGAGGACG
ATTTAAGACCAACCTTTGTCATCGGGAATGTCACAAGTCTCCAAAAGAAA
CATCAACAACTACCAGTTGCCAGCACAAACTCCAGCAACGTCATTGATCT
CACCAGTGACGATAACACAGAAGTGGATCCTAACAAAAAGCCTGGAGAGG
AACCCTTCGAAGCAGCAATGCAAACAATAAGTTTAACGTTAGAACGAAAA
CCTAGTAATGATTTTTCAAACACGGAGCTATTAGAAAATAACCAGGATCT
TTTGGAGGAGATTCAATCAGAGGAACCGCCGATATCGGATAGTATCGATT
CTGAAGTCATCCGAGCCGAGGATATACCAACAATTGAAACGCAAAACAAA
AACGAACCAGAAATTACTTCTATAGAAGACATTTCGTCACCTTCTGGGAG
AAAGAAATTATCTGTTTCTGAGGTCATACAAATGGCAATAAAGCCGAACC
ATGATGAAACAATTTCTAATGCCATCGAAAGTATTAAAACATCAGAAGGC
GCTGTATCTAAGCAAACAGAAAACCAACCGATTGGTAACAATGATAATGA
AGTAGCCAATCAAAATACTCGAATTAAGACATCTGGAACAATCAAAATCT
CGATGCTTGATCAAATCCTACCTGAGATTGTTAACAAAACaatcaacaaa
aagaaaaagattggaAGGACTCCTAAACCTCTACTTGAGGTACCAATCTT
ATCGACAGATTCTCTTGGGAATAATTTCAAATGTGAGCACTGTGATAAAT
GTTTTACAGATTATGATTACTTAAAATCACACCAGAAAATCCACTTGAGA
ATTTATAAATGTGATAAGTGCGACAGAGATTTTGAGCTTGAAAAGTCGTT
GAAAATGCACCAAAATGTTCACGATGAAGTTTATAAGTGTAACGATTGTG
GTAAATGTTTTGCACAGAAAGGTGAGCTTTTAAGTCACGTTCGAGTACAC
ACTAAACCGTTTGTGTGTGGCTTATGTGGCGAGCGCTTTACACAGAATCG
TGATTTGAAAACACACATTCTCTGGCATAATGGTAAAGAAGTATTTAAAT
GTAATGAGTGTGAGAAATGTTTCACACAGAAGTCGTCACTCAGAACTCAT
ATGAATACCCACAATGGTGTCAAACCTTTTAAGTGTCAGGCATGTGAAAA
AACGTTTTCATTGAAAGGTAATCTTCAAAAACATCTTGATTTGCATCGGG
GACTGAAACCCTTTCAATGTCCAGTCTGCTTCAAATGCTTTACACAGAAA
CATGCTCTGCAAAGACATTTAACTTTACATAATTTTGCTCAACCCTTCGA
GTGTGTAGATTGCAACAAATGGTTCGTAAGAAAAGACAGTTATAAACAAC
ACTTGGTAGCTTGTAAAAAGATGGTACTATATAACACATATGGTAATACT
GTAGTTATgcaatcttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000308_pilon | genome | sc0000308_pilon:334768..337401 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2634:1 |
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