XLOC_039448 (mRNA) -

Overview
NameXLOC_039448
Unique NameXLOC_039448
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000068_pilon:339256..340453-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039448 ID=XLOC_039448|Name=XLOC_039448|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1198bp|location=Sequence derived from alignment at sc0000068_pilon:339256..340453- (Clytia hemisphaerica_ch_hm2_pilon)
AATGCCATTCAACAATTTTTCCTTGCTTCTGTTGAAGAAGGAGAAAGATA TTTGGCCATGCAAGATTACGAAAACTGTGTCAATAGCCTAACACAAGCCA TCGCTGTATGTGGTCAACCTCAGCAATTACTTCAAGTCTTCAGAACTACG CTACCTCCTCAAGTTTTCCAAATGTTGTTAGCAAACCTTGCAGCATTAGG TGAAAATCAACCTGCTGGTGCAAGTGGTATGAATGTTGCAAGTGGAATGA GCGTTGGTGCTCCTATGGGTGTAAGTAGCTTTTATAACTACTTTAATAAG GCAGTCAAAGTATATAAAAGAAATGGGACTAAGTTTTTTGTTTGAGACTT CAGGAGACTTAGTTAATAATAAAGTTTGCTTTCTTAGCTTTTTAAAGAGG TGTCTCCAAAAGCTTTGGTTTTTGACTCTAATACCAGACAAATTTTCTGT TTAGGCTCATTTTGGCTACCAGTGTTTTTTGAATGAAACAGTGTTTTAAG ATGTCAATTAAATGGATAGCTAAGCTAACTTTACTTGTTTTAGCTCGTTT GTTTGTTTGTGGTATCATATAATCCTTCCCTTAATCAGATACACTGGGAA TTTTGTATACATTTTTTAAGTCAGCAACATTAGAGGCGATAACATTCACA CCTCCAAAGCAAACATAACACCCCTGTGGAGTGTAACCAATCACAAGCCA TTAAGTTTAGAACCCACTACAGCCCACTACTAAAAATTTTACACATCGCT CCTCATCACTGTCCTTGCATCCAAATTTGAATGGGGTACTCTAGGTTCCA AATAAACAGGGGGAGTTCGAATAAACGGGGGGGGGTTGGAAAATTTTCTA GATTTTGATAAACGGGGGGACCTAATTGCCGGGGGGGTTGGAAATTGTAC CTCTGAAACCTAAATATAAGGTAAAAATAGGCTAAAATCCGGCTATTTAG AGTAAAATAAGGGGCCTTCTCTTTGACAGCTGAAAATGTTCTTAGAGATT AATAAACGGGGGGGGGTCCTAATAAGGTCCGGGGGGTTGGAAAATTTTCG AAAAATTAACAAGCGGGGGGCCGTTTATTTGGAACCTAAGAGTAGGGGTT TGATTGACACATGTTTTCAGTTTTCAATTGATAAATCCTGCATTTCTTTC CAGGTACCAGAAGTAAAAACAACAGATGAAACTGACGTCCTCGATTAA

Coding sequence (CDS) from alignment at sc0000068_pilon:339256..340453-

>XLOC_039448 ID=XLOC_039448|Name=XLOC_039448|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=630bp|location=Sequence derived from alignment at sc0000068_pilon:339256..340453- (Clytia hemisphaerica_ch_hm2_pilon)
AATGCCATTCAACAATTTTTCCTTGCTTCTGTTGAAGAAGGAGAAAGATA
TTTGGCCATGCAAGATTACGAAAACTGTGTCAATAGCCTAACACAAGCCA
TCGCTGTATGTGGTCAACCTCAGCAATTACTTCAAGTCTTCAGAACTACG
CTACCTCCTCAAGTTTTCCAAATGTTGTTAGCAAACCTTGCAGCATTAGG
TGAAAATCAACCTGCTGGTGCAAGTGGTATGAATGTTGCAAGTGGAATGA
GCGTTGGTGCTCCTATGGGTAATGCCATTCAACAATTTTTCCTTGCTTCT
GTTGAAGAAGGAGAAAGATATTTGGCCATGCAAGATTACGAAAACTGTGT
CAATAGCCTAACACAAGCCATCGCTGTATGTGGTCAACCTCAGCAATTAC
TTCAAGTCTTCAGAACTACGCTACCTCCTCAAGTTTTCCAAATGTTGTTA
GCAAACCTTGCAGCATTAGGTGAAAATCAACCTGCTGGTGCAAGTGGTAT
GAATGTTGCAAGTGGAATGAGCGTTGGTGCTCCTATGGGTGTACCAGAAG
TAAAAACAACAGATGAAACTGACGTCCTCGATTAAGTACCAGAAGTAAAA
ACAACAGATGAAACTGACGTCCTCGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039448XLOC_039448-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000068_pilongenomesc0000068_pilon:339256..340453 -
Properties
Property NameValue
Aaloc424-468:46
Aaloc154-423:1199