XLOC_039436 (mRNA) -

Overview
NameXLOC_039436
Unique NameXLOC_039436
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000068_pilon:203994..204985+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039436 ID=XLOC_039436|Name=XLOC_039436|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=992bp|location=Sequence derived from alignment at sc0000068_pilon:203994..204985+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGTGGATAAGAAGAAAGCAGTATTGGTGATCGTATGTGTTGTAGA GTTTATCATTCTTGCAGCATCAACTGGTGGCAACCAATGGTCCAAATCGA TACGTAGGTGCCATCATTCATAATTCGTTTTCTAAACTCatattggaaaa ttttaacacCAATATATTCAAGGGTTTTGTAGTTGACGGAGAATCTGAAG GAATACacattttcgaaaattgggctgtTCTAGTACGGGAAAACGGAATT TCAAAGTAGCTTTCGGTTGCAGAATCTTGGATCTTGTCGACGGAAATATA AGGAAATTTGACGGAAAAGTGGAATCTAATCATGCTAAACGAAAATAGCC TTTTTTATTGCACTGTTAGCAAATAAAAAGCTTGGTTTattgtgggaagg tactggctggTTAGCCggatcgggtaccccctgaaaaccCTCCTGTCAGT GTTTCTGGATACTGAGGACGTTTTGAAGTTACCTGATTAGGGTCATAAAA GCTACTAAATTAGTCAGGATAAACATTTTTATCTCTAaaagattttttag attttgcacAACACCTAATAcaatatttgttcaaatttcaaTTACCTGTC CAGAAGACAAGACTTTTTACTGTttatctctttttttctttatagttGGT GACTCTGGTTTATTTAGATCTTGCAGTTCTGGAAATTGTTATACCTATAG CAGTGATGATGTCTCTGGAGAATTACGAGCAACTCAAGCATTCATGGTAT TATCCGTACTGACCACAATAGTAGCCTGTGTTCTCAGTATCTACCATTAt ctaaaagataaaatccaagtTAAAATTATTGCTTTGGTTATGGTAATTGC ATTTGTCTTGGCGTTGATTGGTTTATCTGTTTACACTGATAATAACAGCG GCGCTGACTTTGGTTGGTCATACGCTTTGGGATGGGTCGGTGCTATTGGT GCCCTTGTCGCTGGTGTTGTTGCTTTCATCTCCAACCGTTAA

Coding sequence (CDS) from alignment at sc0000068_pilon:203994..204985+

>XLOC_039436 ID=XLOC_039436|Name=XLOC_039436|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=900bp|location=Sequence derived from alignment at sc0000068_pilon:203994..204985+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGTGGATAAGAAGAAAGCAGTATTGGTGATCGTATGTGTTGTAGA
GTTTATCATTCTTGCAGCATCAACTGGTGGCAACCAATGGTCCAAATCGA
TACATGGCGGTGGATAAGAAGAAAGCAGTATTGGTGATCGTATGTGTTGT
AGAGTTTATCATTCTTGCAGCATCAACTGGTGGCAACCAATGGTCCAAAT
CGATACttGGTGACTCTGGTTTATTTAGATCTTGCAGTTCTGGAAATTGT
TATACCTATAGCAGTGATGATGTCTCTGGAGAATTACGAGCAACTCAAGC
ATTCATGGTATTATCCGTACTGACCACAATAGTAGCCTGTGTTCTCAGTA
TCTACCATTAtctaaaagataaaatccaagtTAAAATTATTGCTTTGGTT
ATGGTAATTGCATTTGTCTTGGCGTTGATTGGTTTATCTGTTTACACTGA
TAATAACAGCGGCGCTGACTTTGGTTGGTCATACGCTTTGGGATGGGTCG
GTGCTATTGGTGCCCTTGTCGCTGGTGTTGTTGCTTTCATCTCCAACCGT
TAAttGGTGACTCTGGTTTATTTAGATCTTGCAGTTCTGGAAATTGTTAT
ACCTATAGCAGTGATGATGTCTCTGGAGAATTACGAGCAACTCAAGCATT
CATGGTATTATCCGTACTGACCACAATAGTAGCCTGTGTTCTCAGTATCT
ACCATTAtctaaaagataaaatccaagtTAAAATTATTGCTTTGGTTATG
GTAATTGCATTTGTCTTGGCGTTGATTGGTTTATCTGTTTACACTGATAA
TAACAGCGGCGCTGACTTTGGTTGGTCATACGCTTTGGGATGGGTCGGTG
CTATTGGTGCCCTTGTCGCTGGTGTTGTTGCTTTCATCTCCAACCGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039436XLOC_039436-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000068_pilongenomesc0000068_pilon:203994..204985 +
Properties
Property NameValue
Aaloc106-450:648
Aaloc1-102:1