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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000127_pilon:500432..504035+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039419 ID=XLOC_039419|Name=XLOC_039419|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3604bp|location=Sequence derived from alignment at sc0000127_pilon:500432..504035+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATATTTTGAACAAAACAATAAGTTGACATTTACTAAGAGTTTTCA
AGGGCTTAGAAAACATTGTTATAAATGTATCTTGATATTATTACTGGTAA
CTTTAGTACTGTTTGTTGTTGTGTCGACTATTCAAAATTGGTTTACAGTG
ACCTTGAATTGTCAACCTTCTCAAAATGGAACTGTTAACATGGAACATGA
TGTCGTGTTTGGAGTTAAAGATATATGCATCACGAGGAATAAAACAATTG
CTTGCAGGGATATAGCAGATTTTCACATACCTGGAACCATACGTAAGTTA
ATATATCCAggatttatactttttttataagaacataatgcttctgtggc
caaaaacttaagaataagttaagaacactttaaggcattacactttcttt
tttataagagcatccaaaatttttgaagcctttggatgttcttaactttt
tgagttttaagcctaaaaatattcttaacgtgttcttataattttccgat
tttgtgattattttggtccatttccctaagaaataaggtgttttagagtc
tgcgaagcctttaaatgttcttaacttgttcttaacttggccatcgaagc
cttatgttcttatatagtttgttttataaaaaagacatgtatggacttaa
aaaaaccgattttttaggaaaatggaaaaaaataatcaCATTATGatgaa
agtaagaacatgttaaaattatttctttaaaactcGTAAAGcttagaaca
tccaaaggcttcaaaaatctttggACCCCAACCCTCTGGAAAATTAGGCT
TAAATTTCGTCCACGGTAGAAAAAATACCATTTCATTTCAGCCCcaattg
aaaattgactttgaattcatcatcatttgaatttcaataaaaaaattgca
atctccaaaaccatcctcatTGGtttttttgagctggaaacaatgGAATT
TCTATATCCCCTTAGCCCCCATTTATATCTGTATAAAATTTTGTCTCctc
tgtgggaaaaagttccaccggggctgtgagataggGGGTGTACCACTAAT
GACGTTTAGCAATCAGTCTGCACTTTCACGACAGCTTGGCTCCAAAGTGA
CGTATTCggtattaaaaacaaaaaaaattatataatttcATCTGAAATGA
TTGTAGTTTTCTGATCAGGTCAGTGCAACAGGGATATAGCAGTTATCAAA
CAACTTGAACTTTGCAGAAAAATCATTGTTAATTTAACATTTAATGCTTT
TAATTGGTTAATTGTGTAATTAAGAATGGATTAACATACACAtttattca
aagatttttaattgCGATCAACAGACAATCGAGCTTAAAAATACCTCAGC
TTTTATTGATTTCAAATCGTCAATGTATAGGTTGTATAGACCCATagacc
attgacttccaagccggAAGGGCTAGACTTGAGACTCCTGGATAGAAATG
AAGCCCTAATGAAGCCACTTTATTTCCCACAAAcgcaaacgccggattga
aagtaaaatctatcgctagatttcaaaaaatgcagacttcaaaaacaaaa
ggagccactagatacaatccgtcgttaTGATCACAACGCGTTCTAAACGC
GCTCTGGATggtgggaaataagtggcttcacttgttcttgcctgagaaag
gttagagattctactcttgcctttcgggctttaaactcaatgccaTAGAC
AGTATAATCCGTGTGTCACTAATACAGCTTCAGACTGGATGTATATTGTC
AAGGTATATTACTTGAATTCAGATATATGCTGAAAAACGCCAACAATGAG
TCTGCTACGAGATTATTGCCTCTCTTTTATCCATAAGAGATGCACCAAAT
TAGGTAACAAGGTCtatgaaatcttttttcatttcagcaatggACGATAC
AAAGAAGCTTGTGGTTTTAGCCATCGTCTTCAACACGTTTGCTTTACTCC
TGGCATCAAGCACCACCTACTGTAGCCAAGGCTTTGCAAAAGCATCTGTC
ACTTACATTACATTGGGATGTTTAGCTCTGGCAGGTTAGTAGTACTCAAC
CAACTGCAATCCCACACAAAATATTGGAAACAAACGGGATTTccctgtga
aattttaaacatcacaaatgatttttaagcacgTTAAACTAGAGTTGGAa
attagagttttaactctgagttttaacacgagACTTAAGTCTTAAGGCCT
TAGGATCTCAGAATTTAAAGGCTCAAAATTGTTTCGATCAGGCTTGGAAT
ACAGCCTAGAAGCCATCAAaccccttaaaaataaaaatattcaatggaag
aaagtggaactgctaaaatagcaattctcgcccgaactttaaattctgaa
aaacgttaaaatacactaaagtctcaatatatttcgagcaAGATTGTGGT
ACAAGAAATATCAAAGCAACACTGCCCATCTAACACGTCCCTAACGCCAA
TTTAATTCAATATAAGGTCTACCTTATCCGCCCTGTTTACACctgccctt
attggcgttatttttaggtTCTTGatgtaataagggccggcgtacaAGGG
ACCGACGTTAacttagggccggcgtaaaaagggccgataaggtatataac
ATCCATATAATGCATAAAGTCAGGGAAAGTCATGACAGCAACGTTCTATG
AAATCTGGTACATTTTTGGTTATAAACTCTATTGAATGCCCTTCCCCGCC
CTTCTTCGTTAGTCTTTTCGATTGTAAGGTTATTTGTTCAACTTCCTACA
TAGACACTGCTATGTCtaagacccgctgggaccccagcccatcTGGAAAA
TTTAGCCGAAATTTCCTCTGAAATTCCTGCCCAactaggaaattgacttt
gatttaatcCCCATTCGAAGtactctaaaaccatccccactggatttatT
AATCTCCATCAGACTTCCAATAGAAGTTATTATCCCCACTGATGAAAcaa
gttagggttagggttagggttagtgtAATTTGAATCAAAGCCTTATTGTT
ACAGCTACCCTTACACTACCCTTTTATACTCGAACCAGGCCCTCAGTGGT
GTTTAGGATTGATAAACAAACTTGCAGTGGTGAATCATAGTTTAAGGAAG
CTGCGACAGTAATGTGTACTACATTGTCttcaaaccaataaaatttatca
ttaaagatgctacattactggtTTCTTGATCTACAAATaatcatcaaata
cgacagagatagaacaccagaaattcaaatgttatcattccagccgcggc
tttttTATACTATGGGTGAATAAATGACAACTTTCTTTACCCAgttattt
attttcagttgtTAGCGCGACGTATGGTCTCCAAGAAGCTGAGAAACATT
TCGATGGTCACGTGATTGAAGTTCTCAAAATATACTTGGGAATGGAAAAT
AAATGCAGTATAGCTAATCTTCGACGAGGGTTCTGTTTCAATGTTATGAT
TTCGTCTACTATATTATTATATATGGCTTTACTGATGTATGTAATTGAAT
GGAAGTACCCTAAGAAAGAAGAGATTATACCGCAAAGTAATGCTGAGAGA
TTGGCGCGTTATAGGCTAATGAGTCATATATCAGGACAGTCTGTATTTTT
ATAG Coding sequence (CDS) from alignment at sc0000127_pilon:500432..504035+ >XLOC_039419 ID=XLOC_039419|Name=XLOC_039419|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1470bp|location=Sequence derived from alignment at sc0000127_pilon:500432..504035+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATATTTTGAACAAAACAATAAGTTGACATTTACTAAGAGTTTTCA
AGGGCTTAGAAAACATTGTTATAAATGTATCTTGATATTATTACTGGTAA
CTTTAGTACTGTTTGTTGTTGTGTCGACTATTCAAAATTGGTTTACAGTG
ACCTTGAATTGTCAACCTTCTCAAAATGGAACTGTTAACATGGAACATGA
TGTCGTGTTTGGAGTTAAAGATATATGCATCACGAGGAATAAAACAATTG
CTTGCAGGGATATAGCAGATTTTCACATACCTGGAACCATACATGGCATA
TTTTGAACAAAACAATAAGTTGACATTTACTAAGAGTTTTCAAGGGCTTA
GAAAACATTGTTATAAATGTATCTTGATATTATTACTGGTAACTTTAGTA
CTGTTTGTTGTTGTGTCGACTATTCAAAATTGGTTTACAGTGACCTTGAA
TTGTCAACCTTCTCAAAATGGAACTGTTAACATGGAACATGATGTCGTGT
TTGGAGTTAAAGATATATGCATCACGAGGAATAAAACAATTGCTTGCAGG
GATATAGCAGATTTTCACATACCTGGAACCATACcaatggACGATACAAA
GAAGCTTGTGGTTTTAGCCATCGTCTTCAACACGTTTGCTTTACTCCTGG
CATCAAGCACCACCTACTGTAGCCAAGGCTTTGCAAAAGCATCTGTCACT
TACATTACATTGGGATGTTTAGCTCTGGCAGcaatggACGATACAAAGAA
GCTTGTGGTTTTAGCCATCGTCTTCAACACGTTTGCTTTACTCCTGGCAT
CAAGCACCACCTACTGTAGCCAAGGCTTTGCAAAAGCATCTGTCACTTAC
ATTACATTGGGATGTTTAGCTCTGGCAGttgtTAGCGCGACGTATGGTCT
CCAAGAAGCTGAGAAACATTTCGATGGTCACGTGATTGAAGTTCTCAAAA
TATACTTGGGAATGGAAAATAAATGCAGTATAGCTAATCTTCGACGAGGG
TTCTGTTTCAATGTTATGATTTCGTCTACTATATTATTATATATGGCTTT
ACTGATGTATGTAATTGAATGGAAGTACCCTAAGAAAGAAGAGATTATAC
CGCAAAGTAATGCTGAGAGATTGGCGCGTTATAGGCTAATGAGTCATATA
TCAGGACAGTCTGTATTTTTATAGttgtTAGCGCGACGTATGGTCTCCAA
GAAGCTGAGAAACATTTCGATGGTCACGTGATTGAAGTTCTCAAAATATA
CTTGGGAATGGAAAATAAATGCAGTATAGCTAATCTTCGACGAGGGTTCT
GTTTCAATGTTATGATTTCGTCTACTATATTATTATATATGGCTTTACTG
ATGTATGTAATTGAATGGAAGTACCCTAAGAAAGAAGAGATTATACCGCA
AAGTAATGCTGAGAGATTGGCGCGTTATAGGCTAATGAGTCATATATCAG
GACAGTCTGTATTTTTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000127_pilon | genome | sc0000127_pilon:500432..504035 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 442-735:3311 |
| Aaloc | 295-438:1890 |
| Aaloc | 1-291:1 |
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