XLOC_039406 (mRNA) -

Overview
NameXLOC_039406
Unique NameXLOC_039406
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000054_pilon:1284147..1284830+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039406 ID=XLOC_039406|Name=XLOC_039406|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=684bp|location=Sequence derived from alignment at sc0000054_pilon:1284147..1284830+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGATCGCCCATTTTTACAGTGTCAGTGAAAGTACAATACGAACCAT ATTCACTACTTGGatcatgtttatttttcatcattttaaatCCATCGCCC ATCAATTTTTTCCAGAGAGACAGGCCTtccgaaaatttcttccaaagGTG TTTCGCCCTTTCAAAAACATACGTGCCAGTGTTGATTGCACAGAGTTCAA GTGTCAGACCCCAAGGGACTACAAACAACAGGGTCATATGTATTCCAGCT ACAAAAGTCACTGTACCATGAAATGCATGATTGCTGTCAATCCAAATGGA GCTGCATGCTTTGTTTCAGATCTTTTCGAGGGTAGTACCACTGATGTTGA TTTGTTTGAACGTTCTGGCATATTGCAACATGTTAATTACAAAGATTCGT TCCTTGTCGATAAAGGTTTCACTGTCCAGCATTTGTTACTATCAAAGCAA GCTACTATTTTTATACCTCCTTTTCTAGGTAAGCGTGAAAAGTTCACAAA GGAGGAAATCATTCTTACAAAAAGAATAGCAAAAGCAAGAATTCACGTTG AACGTTTTAACGAGCCCTTGAAAAAATTCAGACTTATTGACAGGATAATT CCCTTGTCATTAGCTCATATGGCTTCGCAGTTGGTATTTGTTGGGTGCAT GCTTGTTaactttcaagaatttttatgcaaataa

Coding sequence (CDS) from alignment at sc0000054_pilon:1284147..1284830+

>XLOC_039406 ID=XLOC_039406|Name=XLOC_039406|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1368bp|location=Sequence derived from alignment at sc0000054_pilon:1284147..1284830+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGATCGCCCATTTTTACAGTGTCAGTGAAAGTACAATACGAACCAT
ATTCACTACTTGGatcatgtttatttttcatcattttaaatCCATCGCCC
ATCAATTTTTTCCAGAGAGACAGGCCTtccgaaaatttcttccaaagGTG
TTTCGCCCTTTCAAAAACATACGTGCCAGTGTTGATTGCACAGAGTTCAA
GTGTCAGACCCCAAGGGACTACAAACAACAGGGTCATATGTATTCCAGCT
ACAAAAGTCACTGTACCATGAAATGCATGATTGCTGTCAATCCAAATGGA
GCTGCATGCTTTGTTTCAGATCTTTTCGAGGGTAGTACCACTGATGTTGA
TTTGTTTGAACGTTCTGGCATATTGCAACATGTTAATTACAAAGATTCGT
TCCTTGTCGATAAAGGTTTCACTGTCCAGCATTTGTTACTATCAAAGCAA
GCTACTATTTTTATACCTCCTTTTCTAGGTAAGCGTGAAAAGTTCACAAA
GGAGGAAATCATTCTTACAAAAAGAATAGCAAAAGCAAGAATTCACGTTG
AACGTTTTAACGAGCCCTTGAAAAAATTCAGACTTATTGACAGGATAATT
CCCTTGTCATTAGCTCATATGGCTTCGCAGTTGGTATTTGTTGGGTGCAT
GCTTGTTaactttcaagaatttttatgcaaataaATGACGATCGCCCATT
TTTACAGTGTCAGTGAAAGTACAATACGAACCATATTCACTACTTGGatc
atgtttatttttcatcattttaaatCCATCGCCCATCAATTTTTTCCAGA
GAGACAGGCCTtccgaaaatttcttccaaagGTGTTTCGCCCTTTCAAAA
ACATACGTGCCAGTGTTGATTGCACAGAGTTCAAGTGTCAGACCCCAAGG
GACTACAAACAACAGGGTCATATGTATTCCAGCTACAAAAGTCACTGTAC
CATGAAATGCATGATTGCTGTCAATCCAAATGGAGCTGCATGCTTTGTTT
CAGATCTTTTCGAGGGTAGTACCACTGATGTTGATTTGTTTGAACGTTCT
GGCATATTGCAACATGTTAATTACAAAGATTCGTTCCTTGTCGATAAAGG
TTTCACTGTCCAGCATTTGTTACTATCAAAGCAAGCTACTATTTTTATAC
CTCCTTTTCTAGGTAAGCGTGAAAAGTTCACAAAGGAGGAAATCATTCTT
ACAAAAAGAATAGCAAAAGCAAGAATTCACGTTGAACGTTTTAACGAGCC
CTTGAAAAAATTCAGACTTATTGACAGGATAATTCCCTTGTCATTAGCTC
ATATGGCTTCGCAGTTGGTATTTGTTGGGTGCATGCTTGTTaactttcaa
gaatttttatgcaaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039406XLOC_039406-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054_pilongenomesc0000054_pilon:1284147..1284830 +
Properties
Property NameValue
Aaloc1-684:1