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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:68462..72582+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039395 ID=XLOC_039395|Name=XLOC_039395|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4121bp|location=Sequence derived from alignment at sc0000023_pilon:68462..72582+ (Clytia hemisphaerica_ch_hm2_pilon)
ACGTTTGATGAGAATGATAACGTGGAAGTTGAAACATTCGAAGTTTATGG
TAAGGagatatcttcatttttgaCCACAGTTTGATTTAAAACCCACTTAG
AGGAGTTGGTAGAAGGAGGAGAGAAAATCCATAGCCGTAGATATGACGTC
TTTATTTCTAGCGATGGATTGTATTGTGGCAAACACTTGTCAAATTTTCC
GCCTGTGATGTAGATGCCATATTTACGAGCTGAAATGTGTTGTTTTTTAT
AGGAAGGAAATTCGCTATCGAAGTTATACGCCAGAAAATGTTGGATAAAC
ACTCGAGATTCATCAGACCAAAATCAGACGAATTCTACGAAAACGCCGGT
TTAGATGATATGAAATTGGAGTACGCGCGCTTAAATATGAAGCTTGACGA
AACGCACGATATACGGGAAATGGCTAACAAATTGAAAAAGCTACAACGGA
CAAGAAACTTGGCTTGCTGGCACGACACTTCTTGCATTTCTAATGCTTCT
CATTTCCTTGTTTTGTTGAATTGCGTCTACGATGAAGCGATATTTTACAC
GAGCGAAGAATTTGCCGCGTTGACAGGTAGgttcaattgttttattttat
tatttaaattgCGAGATTGTTTACTAATCTTTCGCAGATATTGTAGGTTT
ctgataaaagaaaagaaaagatgaaatgattttgaaattatcagttgtat
tttgtttttgttctccCACTCTATTTTCACCGATCGCCATCAATTAGGAA
GACGAAACTCATTTTGAATTAACAtataaaaaatttcatgaaccgaatac
tttatcggggaaaacttcgtcagaAAAACTACCGTAcgattttataaaaa
caagtcaatcactttgaaattttgagcttttctttatttggaatatcgtc
aaaaaataaaagttgattgaACCCAAATTTTAACGACGAACAAGGCCAAC
ATTACAGCAAATGACATCACTCTTACTTTAAAACAATACCTGAGGTCTTT
ATATAGACTCCtttttttATGTGCAAGACTTTTGTGTCCAATTAGgcaat
ctaggacttttaggcaTGTTTTTCGATTGATTTCACAGGGTGTGTGACCA
TTCGGTCGGCTACATATCTCTGAGCCAAACGGAATTTAAGAAGGAGTGGG
AATTCGAACCGAAAACCCCTTGTTTGTAGCGCTGACGCCGTAGATTATTT
GGCCATCGCATCTCCATATTCCATATAAAATCACTTGATTCAAAATATTA
ACTCGCAAAATGTTCTAGACACTAGACACGAAATCagaatttcagatttt
cagaCTTGCTTCCTAAGCAAGCCAATAGGAAAACGATGTAATCTTATCTA
CGCGTTTTGAATAACTTGTGGAACTGTCCTTAGGTTAAACAGTATCAGAG
ATTAATTAAGTTTTGATTAAATAATGTTTTCCATTATCGggaaaaaaaat
gtcggagtttttttttgtcggggaaaaatttcgtcacctagaggcatttt
cgtcactttcccccgaccaaaatttcaaattcgtcaatttcccccgacta
aattgtccaaatgaaatagTTTCCTTTACTAGCtcgaaaaagatcttgta
attcgacgtttaaagcaattttaatttggttggggtttaaaaaatcggct
aaaagttttggtcgggtgataaaatatcggggaaaaattcgtccgggaaa
attttcgtcaccccttcaaaattttcgtcactttcctccgacattttttt
ccccgataaggtataacaCGTGCGCAGGGAATAGTCGATTAACAGTAAGT
TCGCaatggaatatttttcatttttaagggacACTCTTTGACATCCCAGA
TCTTGTTGAAAGGCCGGAGATGTATATACTGGCAAGGTGTCCGTCAAACG
ACCAGCAGCTAATGTATAGTTCAATACGTTTTGCCGACATCGAGGAGATG
AACAAAAAACCCATCAAGTACAACGGCGCGGAGATCAACGATAGAATGCg
atttttcaaaggtttttcatctatttcaattttattcgtttccgggaata
catggttttttataagcaagtgtctatatcaggctcgcattacgcttagc
attctattgttctcaaacagtagagccattgtttactctcaggtacctaa
tattCGGGGgacccgctaattaatttttcgaaaattttccacccaggacc
aTGCGAAACTCCTTGATCTTGatgagaaatgaagccacttatttcccatc
cagaactccgcgcgtagtttttacacaaacgccggattgaaactaaaatc
tatcgctagatttcaaaaagtgtaatcccccaaaacaaaggaactgctag
atacaatccgtcgtcttgattacggcgcgttctatgcgcgttttggatgg
gaaataagtagcttcaatttctcttgcctgagaaggcttgaaactcaatg
tacAGGACATTTAtattccaacccctccccccgtttatcgattctttttt
tgaaagtttcaccTTTTGACCTAATTCTACTGTATTACAGGGGTCACACT
CGGCATTTCAATTTCGCTatccgttaaattttgttttgaaaagatatttt
ttcaagccagaaaaagaaaaattttttacaagcacacacgattttagact
caatttgtagacattaagtcactggagaattttggaggaaagtaaaCTAT
AGCAAAGTAAATCGACACAAAAATTGTTATATTCAACTATTAACTATCAA
TgtaaaaatttataacaaaattATTGAATATTTTGCTACAATTCAGGAGA
TGCTCCAGCCTGTCAGTTGGAGAGTGGTCACAAAAAAGGAGGAAATTACT
TTTGTTGGGGTTGCGAGTGCAATTCTTTCCGCTGCCACGACCTTCAATAC
GCATTCAATGCCACCAAGATGTCGCTCGATGACAAGTGTGAGAAGTTAAA
CATGACTGAGGTCGGTCGGAAACTTCAAAGCGAAGGTGCTCTGCACTACA
GTTCCTGCCTGAAAAGTCACGAAGCCCTACTTGAACTCCATTTACGCGAT
ATTGTTGTTCCTGTCGAAAGTCGTGTTGAAGATTTGAGGAAAGAGATCGA
TAACGAAATGAAGGGAACACACAGAATGCCAGCTCTGTTGCACAATACTG
GCAAATATCGCTTTGCTGAAGTTGGAATGTGCGATTACGAGGTGCTTCCA
GTCGAACCATTGCACGCAATAGGTCACCATATCAATAATCTTTTCGAGGA
AATCCCAAGACACCTTCCGAAAAAAGAACGGGGCGTATTTGAGAGAACTT
TGAAAGCTGCTTTTTCTTCAAGGCAAGTCAAAAGAGGGAAAGATTACCGA
AATGCATTGCTCCAATTAACGACGGCCGTTGATGGACGAATTGATGACAA
GATAGTCCAGATTCTGATTTCTCTATGCGAGATACAGGAAATCCTCTACT
CGAACGAGAGGTCCGCTGAATTGATTTTGCGGCTGTACAACGTGACATTT
GTTCATGCCATGAAAATGATCGTGGCTTTCGAAACGACTGAGAAGTTGAC
GAAGCGAAAATTGTTCGGCCAGTATTTTCACGCACTTGTTTGCCATGCTC
CAGAGCAATTCCGCATAATTCCAATGCCCTCATCAAATGCCGAAGATGAG
GAAAGGTTCTTTAATTTCCTCAAAACATGCACGAAGTGTACTTCCAATCA
TCATCCGGAAAATGTCTTGGACAACTGCTTTATTCGCTGCCAAGTACGTG
AAGAAATCAAGTCCGACAAGGATggctgtaaaagaaaaaaaagagagtCA
TCAATCTCTAAGTCTGGCAAGAAGCTTCCACCCAAGACCGAAACTATAAT
CCCTTTCCGATTCATCACAAAGTTCCCTAGGATATGGCAAGCTCATTTAG
AGAGGATAGCTGATTTTTTAGTTGTCAAAGGCATTTGGACAGAAATGACC
GATGGCATCAAGTTTAGCGACCTGAAAAAGCTCAATCTCCCTATCAGTCA
TTTTCGAGATACAACAATTAAGCAGGAGTTGGTCCGTGTTAAAGAAGTGT
GGTCAGATCTCCTCAAAAGCTCTCCTTCTCAAATTCCTGCCTATGAGATC
ATTGATGATGACGGAAAGAAG Coding sequence (CDS) from alignment at sc0000023_pilon:68462..72582+ >XLOC_039395 ID=XLOC_039395|Name=XLOC_039395|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3762bp|location=Sequence derived from alignment at sc0000023_pilon:68462..72582+ (Clytia hemisphaerica_ch_hm2_pilon)
ACGTTTGATGAGAATGATAACGTGGAAGTTGAAACATTCGAAGTTTATGA
CGTTTGATGAGAATGATAACGTGGAAGTTGAAACATTCGAAGTTTATGGA
AGGAAATTCGCTATCGAAGTTATACGCCAGAAAATGTTGGATAAACACTC
GAGATTCATCAGACCAAAATCAGACGAATTCTACGAAAACGCCGGTTTAG
ATGATATGAAATTGGAGTACGCGCGCTTAAATATGAAGCTTGACGAAACG
CACGATATACGGGAAATGGCTAACAAATTGAAAAAGCTACAACGGACAAG
AAACTTGGCTTGCTGGCACGACACTTCTTGCATTTCTAATGCTTCTCATT
TCCTTGTTTTGTTGAATTGCGTCTACGATGAAGCGATATTTTACACGAGC
GAAGAATTTGCCGCGTTGACAGGAAGGAAATTCGCTATCGAAGTTATACG
CCAGAAAATGTTGGATAAACACTCGAGATTCATCAGACCAAAATCAGACG
AATTCTACGAAAACGCCGGTTTAGATGATATGAAATTGGAGTACGCGCGC
TTAAATATGAAGCTTGACGAAACGCACGATATACGGGAAATGGCTAACAA
ATTGAAAAAGCTACAACGGACAAGAAACTTGGCTTGCTGGCACGACACTT
CTTGCATTTCTAATGCTTCTCATTTCCTTGTTTTGTTGAATTGCGTCTAC
GATGAAGCGATATTTTACACGAGCGAAGAATTTGCCGCGTTGACAGggac
ACTCTTTGACATCCCAGATCTTGTTGAAAGGCCGGAGATGTATATACTGG
CAAGGTGTCCGTCAAACGACCAGCAGCTAATGTATAGTTCAATACGTTTT
GCCGACATCGAGGAGATGAACAAAAAACCCATCAAGTACAACGGCGCGGA
GATCAACGATAGAATGCgatttttcaaagggacACTCTTTGACATCCCAG
ATCTTGTTGAAAGGCCGGAGATGTATATACTGGCAAGGTGTCCGTCAAAC
GACCAGCAGCTAATGTATAGTTCAATACGTTTTGCCGACATCGAGGAGAT
GAACAAAAAACCCATCAAGTACAACGGCGCGGAGATCAACGATAGAATGC
gatttttcaaagGAGATGCTCCAGCCTGTCAGTTGGAGAGTGGTCACAAA
AAAGGAGGAAATTACTTTTGTTGGGGTTGCGAGTGCAATTCTTTCCGCTG
CCACGACCTTCAATACGCATTCAATGCCACCAAGATGTCGCTCGATGACA
AGTGTGAGAAGTTAAACATGACTGAGGTCGGTCGGAAACTTCAAAGCGAA
GGTGCTCTGCACTACAGTTCCTGCCTGAAAAGTCACGAAGCCCTACTTGA
ACTCCATTTACGCGATATTGTTGTTCCTGTCGAAAGTCGTGTTGAAGATT
TGAGGAAAGAGATCGATAACGAAATGAAGGGAACACACAGAATGCCAGCT
CTGTTGCACAATACTGGCAAATATCGCTTTGCTGAAGTTGGAATGTGCGA
TTACGAGGTGCTTCCAGTCGAACCATTGCACGCAATAGGTCACCATATCA
ATAATCTTTTCGAGGAAATCCCAAGACACCTTCCGAAAAAAGAACGGGGC
GTATTTGAGAGAACTTTGAAAGCTGCTTTTTCTTCAAGGCAAGTCAAAAG
AGGGAAAGATTACCGAAATGCATTGCTCCAATTAACGACGGCCGTTGATG
GACGAATTGATGACAAGATAGTCCAGATTCTGATTTCTCTATGCGAGATA
CAGGAAATCCTCTACTCGAACGAGAGGTCCGCTGAATTGATTTTGCGGCT
GTACAACGTGACATTTGTTCATGCCATGAAAATGATCGTGGCTTTCGAAA
CGACTGAGAAGTTGACGAAGCGAAAATTGTTCGGCCAGTATTTTCACGCA
CTTGTTTGCCATGCTCCAGAGCAATTCCGCATAATTCCAATGCCCTCATC
AAATGCCGAAGATGAGGAAAGGTTCTTTAATTTCCTCAAAACATGCACGA
AGTGTACTTCCAATCATCATCCGGAAAATGTCTTGGACAACTGCTTTATT
CGCTGCCAAGTACGTGAAGAAATCAAGTCCGACAAGGATggctgtaaaag
aaaaaaaagagagtCATCAATCTCTAAGTCTGGCAAGAAGCTTCCACCCA
AGACCGAAACTATAATCCCTTTCCGATTCATCACAAAGTTCCCTAGGATA
TGGCAAGCTCATTTAGAGAGGATAGCTGATTTTTTAGTTGTCAAAGGCAT
TTGGACAGAAATGACCGATGGCATCAAGTTTAGCGACCTGAAAAAGCTCA
ATCTCCCTATCAGTCATTTTCGAGATACAACAATTAAGCAGGAGTTGGTC
CGTGTTAAAGAAGTGTGGTCAGATCTCCTCAAAAGCTCTCCTTCTCAAAT
TCCTGCCTATGAGATCATTGATGATGACGGAAAGAAGGAGATGCTCCAGC
CTGTCAGTTGGAGAGTGGTCACAAAAAAGGAGGAAATTACTTTTGTTGGG
GTTGCGAGTGCAATTCTTTCCGCTGCCACGACCTTCAATACGCATTCAAT
GCCACCAAGATGTCGCTCGATGACAAGTGTGAGAAGTTAAACATGACTGA
GGTCGGTCGGAAACTTCAAAGCGAAGGTGCTCTGCACTACAGTTCCTGCC
TGAAAAGTCACGAAGCCCTACTTGAACTCCATTTACGCGATATTGTTGTT
CCTGTCGAAAGTCGTGTTGAAGATTTGAGGAAAGAGATCGATAACGAAAT
GAAGGGAACACACAGAATGCCAGCTCTGTTGCACAATACTGGCAAATATC
GCTTTGCTGAAGTTGGAATGTGCGATTACGAGGTGCTTCCAGTCGAACCA
TTGCACGCAATAGGTCACCATATCAATAATCTTTTCGAGGAAATCCCAAG
ACACCTTCCGAAAAAAGAACGGGGCGTATTTGAGAGAACTTTGAAAGCTG
CTTTTTCTTCAAGGCAAGTCAAAAGAGGGAAAGATTACCGAAATGCATTG
CTCCAATTAACGACGGCCGTTGATGGACGAATTGATGACAAGATAGTCCA
GATTCTGATTTCTCTATGCGAGATACAGGAAATCCTCTACTCGAACGAGA
GGTCCGCTGAATTGATTTTGCGGCTGTACAACGTGACATTTGTTCATGCC
ATGAAAATGATCGTGGCTTTCGAAACGACTGAGAAGTTGACGAAGCGAAA
ATTGTTCGGCCAGTATTTTCACGCACTTGTTTGCCATGCTCCAGAGCAAT
TCCGCATAATTCCAATGCCCTCATCAAATGCCGAAGATGAGGAAAGGTTC
TTTAATTTCCTCAAAACATGCACGAAGTGTACTTCCAATCATCATCCGGA
AAATGTCTTGGACAACTGCTTTATTCGCTGCCAAGTACGTGAAGAAATCA
AGTCCGACAAGGATggctgtaaaagaaaaaaaagagagtCATCAATCTCT
AAGTCTGGCAAGAAGCTTCCACCCAAGACCGAAACTATAATCCCTTTCCG
ATTCATCACAAAGTTCCCTAGGATATGGCAAGCTCATTTAGAGAGGATAG
CTGATTTTTTAGTTGTCAAAGGCATTTGGACAGAAATGACCGATGGCATC
AAGTTTAGCGACCTGAAAAAGCTCAATCTCCCTATCAGTCATTTTCGAGA
TACAACAATTAAGCAGGAGTTGGTCCGTGTTAAAGAAGTGTGGTCAGATC
TCCTCAAAAGCTCTCCTTCTCAAATTCCTGCCTATGAGATCATTGATGAT
GACGGAAAGAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:68462..72582 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 559-1881:2799 |
| Aaloc | 376-555:1831 |
| Aaloc | 52-372:255 |
| Aaloc | 1-48:1 |
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