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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000506_pilon:76373..78277+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039393 ID=XLOC_039393|Name=XLOC_039393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1905bp|location=Sequence derived from alignment at sc0000506_pilon:76373..78277+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGTCTCACTTGGTGAGAGAATTGCTAGAAGAATACATCAGAAAGGTTAT
ACTATTTATGATAGATAGAGAGTTTTCATCAGGAATCGAAATGCCATATA
TTTCCCATCATTTTCAAGGCAAAGAACGAGAAGGTGCAGAAGTTCCATGG
GGAACAGAACCAAAAGAACGTTTGGGTAATTCTAAATATCTCTAGTTTAT
ATCTTTATAATACATGTTTTCTTTCGGAATcaaattgaaacttttgaatG
TTAACATTTTAGGCGTTGGCAAAGGGAGCAAATTAACGACATACGGATGG
ATGTTTCAAGGACAAAAAGGTTTACCTGCACAATCATATAGGTATTAACA
TGCTGCCTGTCTACGTGTTTCTTTCGTGTTCTGacatgtttcttttgttt
tagtgaaaaagtgctTTTCGGAGTGATTTTTACTGTGGAAATGTCATTAC
CTTGCTTTTAGAAATCACACAACTAATCACTTTGACCCACAGAACTGGCG
AAATAAAAGCCAGTACTCTGAAACATTCTTCACTCCGCAAATGTACAGTC
GTCATCAAATACAGAAATTCACGGCCAATCGTAATCACCGTCCACACCCT
AAGGAGCTAATTTGGCCTATGGAACCATTCAAGGTAAACATACGCCCATT
CGTCCTCacaagattttttttgtgtATGATAAAGCTTTCTTAAAGTCCCG
TAATAAGAtcggctgctggcatccactaacggatttgtGCTCCTTATTAT
ACTACCTGGAGTTTTGTAGATGTCTGTAATTCAGACTAGTAATAAAATTC
CTCTGTATGTTGCTAATGCAATAGCATAAGCAAACTGGTATTCCAAGCTT
CCAAACTTGTAAGACGCAATTGGAAGACAAATCAAATGATGATTATAAAT
AAGCCAAAATCATATCGAGTTGGATACCAGGAAACGCAAAAACCTGACCC
CCTTCATTCATGTTTTGGGAAATAGGTATCAAAACTAAAGCCCGACATCC
TGAAACAATATCATAACATCAatgaactttcaaattttgacgaattttaa
aTACCCCTCTCTCCAAACCATTActcattacaaaaaaaaatttattttca
agggGTATATGATTTGGAAACCTAAACTTGTTCCGGATGATGGTGAAATC
AAAAAGTACAGCGCTCCTTCTCTTCTTCGACAATATCAAGACAACAACTG
GAGGACAACCAACCAAACCACTTATCAAAATTACTACGAAGGAGTTCCaa
aaaaaCCCTCCACTACTGGAGGAATTCGTAAAGACGATAGACCAACGAAA
GGTTCTGTGTCCAATCAGAGGGACGCGTTGGAATCAAGTCTAAGGGGATC
CAGAGTCGGATCAAGACAAGAAGGTAACAAGATATGATGACATGAAAAAC
GTTGActtctgataaaaaattcatATCTTCTGCTATACACTTGGGATTTT
CGAGTTTATACTGTTGTTTTATCGTGGAAACTACAGCGTTTACTTGGAAT
ATGATCAAATAACAGAACacattttcgaccgtagccgccaattgctgcgT
GGGcaatttttgtccgttttattTTACCAAACTGAAACCCTTCCAGTCTT
Ttgttcgcacctatagacaatagaaagagtgtaaaaaaaggattggattg
agtttagggggatgaataaataataaagtggcatgcacctgaccgcgcga
ctacggtcgaaaaagtgttttaattttcttcattCAATTTAGCTTTATGA
GATGACATGTTTACACTCTTTTGCTTtccttttcagctttttccaCACCA
CCTCACTTGCGCACTTCATACAAACTGAACTTCACAGGTGAACCAATCAA
ACCCTCGACCAACGCAAATCCAGGCGATCGATCTTGGCGAAATATACGct
attga Coding sequence (CDS) from alignment at sc0000506_pilon:76373..78277+ >XLOC_039393 ID=XLOC_039393|Name=XLOC_039393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1632bp|location=Sequence derived from alignment at sc0000506_pilon:76373..78277+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGTCTCACTTGGTGAGAGAATTGCTAGAAGAATACATCAGAAAGGTTAT
ACTATTTATGATAGATAGAGAGTTTTCATCAGGAATCGAAATGCCATATA
TTTCCCATCATTTTCAAGGCAAAGAACGAGAAGGTGCAGAAGTTCCATGG
GGAACAGAACCAAAAGAACGTTTGGGTGTCTCACTTGGTGAGAGAATTGC
TAGAAGAATACATCAGAAAGGTTATACTATTTATGATAGATAGAGAGTTT
TCATCAGGAATCGAAATGCCATATATTTCCCATCATTTTCAAGGCAAAGA
ACGAGAAGGTGCAGAAGTTCCATGGGGAACAGAACCAAAAGAACGTTTGG
GCGTTGGCAAAGGGAGCAAATTAACGACATACGGATGGATGTTTCAAGGA
CAAAAAGGTTTACCTGCACAATCATATAGGCGTTGGCAAAGGGAGCAAAT
TAACGACATACGGATGGATGTTTCAAGGACAAAAAGGTTTACCTGCACAA
TCATATAGAAATCACACAACTAATCACTTTGACCCACAGAACTGGCGAAA
TAAAAGCCAGTACTCTGAAACATTCTTCACTCCGCAAATGTACAGTCGTC
ATCAAATACAGAAATTCACGGCCAATCGTAATCACCGTCCACACCCTAAG
GAGCTAATTTGGCCTATGGAACCATTCAAGAAATCACACAACTAATCACT
TTGACCCACAGAACTGGCGAAATAAAAGCCAGTACTCTGAAACATTCTTC
ACTCCGCAAATGTACAGTCGTCATCAAATACAGAAATTCACGGCCAATCG
TAATCACCGTCCACACCCTAAGGAGCTAATTTGGCCTATGGAACCATTCA
AGggGTATATGATTTGGAAACCTAAACTTGTTCCGGATGATGGTGAAATC
AAAAAGTACAGCGCTCCTTCTCTTCTTCGACAATATCAAGACAACAACTG
GAGGACAACCAACCAAACCACTTATCAAAATTACTACGAAGGAGTTCCaa
aaaaaCCCTCCACTACTGGAGGAATTCGTAAAGACGATAGACCAACGAAA
GGTTCTGTGTCCAATCAGAGGGACGCGTTGGAATCAAGTCTAAGGGGATC
CAGAGTCGGATCAAGACAAGAAGggGTATATGATTTGGAAACCTAAACTT
GTTCCGGATGATGGTGAAATCAAAAAGTACAGCGCTCCTTCTCTTCTTCG
ACAATATCAAGACAACAACTGGAGGACAACCAACCAAACCACTTATCAAA
ATTACTACGAAGGAGTTCCaaaaaaaCCCTCCACTACTGGAGGAATTCGT
AAAGACGATAGACCAACGAAAGGTTCTGTGTCCAATCAGAGGGACGCGTT
GGAATCAAGTCTAAGGGGATCCAGAGTCGGATCAAGACAAGAAGcttttt
ccaCACCACCTCACTTGCGCACTTCATACAAACTGAACTTCACAGGTGAA
CCAATCAAACCCTCGACCAACGCAAATCCAGGCGATCGATCTTGGCGAAA
TATACGctattgactttttccaCACCACCTCACTTGCGCACTTCATACAA
ACTGAACTTCACAGGTGAACCAATCAAACCCTCGACCAACGCAAATCCAG
GCGATCGATCTTGGCGAAATATACGctattga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000506_pilon | genome | sc0000506_pilon:76373..78277 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 700-816:1789 |
| Aaloc | 427-696:1103 |
| Aaloc | 256-426:463 |
| Aaloc | 178-252:265 |
| Aaloc | 1-174:1 |
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