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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000144_pilon:463172..468080- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039392 ID=XLOC_039392|Name=XLOC_039392|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4909bp|location=Sequence derived from alignment at sc0000144_pilon:463172..468080- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGAAGAAAAAGGTGGTCGTTGCTGTCGATGCTGCACGACTGTTGT
CACAATTTCCATTCTCATTGTTGTCAGTGTTCTTCTCATCTGTTTGGGAG
CTGGATCCATCCCTTTTCTCACCAACTTTTATAAAGATACAGTACTAAAG
GTATACAGTCTTCTCTTTGCATTTAATCAATCTTCAATCATTATTCTTGC
CCAACCAATGCAAGATGTTCAGTACCTGTCAAATATGTACGTCACCAGCT
GTTCGCAGTGTCCATTTAGTGTGTTTTGTTAAATCTGGGACTTTATTTTG
CTAAAAAAAACAACATAACTCTACCAAATATTTAGCTTATCATGATTCGT
GACCAGTGTTTCCACTATTTTTTCAGCAATTGGTGATGAAATATTCGGAT
TCTTCTGGAGGGAACGAAGCTTACAAGAATTGGAATTCTCCTCCAGCACC
TGTCTACATGCAGTTTTATATGTTTAATTACACGAATGTTGACGAAATCA
TCAATGAAAAAGCTAAACCCAATGTCACTCAACTCGGCCCATACTCCTAC
AGGTAGTTTTGACACGTCTCTGTTTATGTCTACTTCTACATAGTATGGGC
AATTAAAGCCACATTGAGCCAAATTTTTCTGCTTCAAGCAATCATTGTTT
TTCTATTTATATCATTTTCCACCGTTTAAAATTCATGGAATTCTAAAGAT
CTGACAGACTTCTATCATCGGTTTGGATTTTTTCTCGTTATAGAGAGGTC
CGTGAGAATGTGATCCTTCACCAAAATGAAAATGAAATCACTTACTTACA
AAATTATTCATACGTATTCGACCCTGCTACTTCATGTGCTAACTGCTCAG
AAAATGATACGATCATCACTCCGAACCTTGCTGTCATCGTAAGATTCGTC
TTCATTATTCTTCGTTCCGTCTTCTTTGAGCTCTGAGTACGCTCTTGGCT
GCACGCATCCCCTCCCGTCCGTCTTTGTGATTTTGAGTTTTAGAAACTTG
GTTAGCTTGATTAGTAAGTTTTATATGAGAGATCTTTAAATTTCATTGAA
TTCGAATTGAAAATTTGAATTGCTCTAGATTAATACAATCATTGGATTTC
TGAACCTTATTAAGAAAATTGAAACAGGTTACCTCAAATTTGGGATAACT
CACGGACGGGAATTTTATACACGATTATCATCCCCTATTCAAAACATATC
AGAGGGGATGCTAGCAGCCTAAGAACGCTCATTTATAACCTGTTACGATT
TAAGATCTTTGATTTCAAATTGCAAAGTGGACAATTGGTATTGTTAGGTT
ATTTCAAATTTTTTGTTCTCCGCGAATGGATATGTCAGAAGTTGTTAAAA
TGCCAGCTTTCAATAATAGTACTATCCCCTAGCATGCTTTATCGATGGAT
AGGTTTTTCTACGACTTATCTTTTTTTCAGACATTTCAAGCGAAATTGAA
GGATTTGAACATCACACCACAATCAGGATTTGTCAAGAGATGGGCCATTG
AAGCTTTAGATAAACTGTTGAATAATGACAAAACGTACAAAATGTTCATA
CCTTTGCCAGTGCATGAACTGTTATGGGGATACACCAGTCCATTCCTCGA
TCACCTGGAAGGTCTCATACCAAAAGTCATACGGAACCTCATTCCGAACC
TACCCCCGCCTTTTATAGCTTTACAGGTAATTCTTTCATGTATTTGTTTA
CCCGGTGAAAATTTTGATCCCAACATCTCTCTTTACATATGCAACTGGTA
ATACAGTCGGCTTTCGCTTATTCGAACTAAAAAGGGGAATCTTATTATAA
AAATTATTCTAAGAGGGTTTCTCTTGGAGGGTGCCGAAAGCAAATTTGAA
CTACAGAAAGATTCGAATAATAGAAGTTCGAATAAGCGAGAGTTTACTGT
AGTCTAATATGTTTCTTCCATCTACCAGCAAAACGGTACAGCAGGTGCAG
TGGCAGTTGGAAATATCACCATTCTTACGGGCAAGGAAGATATCAATAAA
GTTCAAATAACAACTAAATGGAGGGGGAAAAAGTAAGAATTTCTTGATCT
CTTATCTTCTCCTTATTCTGTACTAAACGTAGACCACTGATCTCCAACTA
CTTGATTGGATGGGGCTTCCCATATAAAAGCAAACGTGCATAGTTTTAGA
GCTGTCCACTATTTTGTATTCTATTCTGGTCAGTATAATTCGAATGTTTT
GAAATTCTAACGTTCGAAAATCTAAGGTAAATTAGAAAACAACATGGCAG
ACTAGTCGGCTTCAAACCAATTTCAAACACACTTCCACGGAAAACCTCTG
AGCAGTTAGCTTATCTATTGTTGAAAGGAATATGATTGCAGTGACGTAAG
CGCTTCGACTTTCTAGACTTAAAAAACACCAAAATAAATTTCAACTATTC
TCTCTCAGTTCCACAGGTTCTTGGAATGGAGACGAGTTTACAAATTTTTG
GCAAACACCTTATGGCAATATGATCAATGGAACAGGTCAGCACTACAAAT
GGAACTTTCAACTTTTTTAGCCATCCTTTTGACTCGAGAACTATTCCCTC
TCATCCTTTCTAGACGGCTTTTCAAAGCAAATGAAAACAAAAATCCTCTT
CCTTTACAGATGGATCCCACTTTCAACCTTACATCTCGAAAGATGACGTC
ATTTACATTTTCAATCCTCAGTTATGCAGGTTAATATGAATATTTTTAAA
GAATAATTTGTGTCACAGATGGTTCAAGATCTGTGCTCCGTATATCGCTA
GCTTTATTTTCCTCACCCAGCCTCACAAACTGCGGGTGGGGTAGTATAGG
TTGGCTTGTCACCCTCTGTCTGAACTCGTTTCTAGGAGATGTACTGAACA
CTCCGACAGTTCAAAATTTTCCAAATACTCGTCCGATTACCAATTTGTAT
CCAACTGTAATGAAGCTAAATGAAGCTGTAAGTAAGAGTTGTACCCAAAG
AGAAATTATTGATTTTAAAAACCATTATGAAATTGTTACTTTGTCACATA
GGTCGTTGTATTTGAATTATCAGAGAGATACAAGCATTATGGACATCAAA
TTATTACGCTACACAACGAGGGCGAAAATCTTCCAAAATTACACTGCCAA
CCCAGACAACAAAGCTTTCTGTGGTCCGAAACGTTGTTATCCAAGTGGCC
TGTTACCAGTGGGACAGTGCCAGCCTGGCAGTAAGATTTGTATTGTTAAT
TGGATAGTTTCATATCAGTTTTCAACGAGCCACTTGTGTTTTAAGGGGAT
AATTCTTCTTTTACGGATGGATTCTTTTAAATGCAACGTCTTTTGGTCTC
AACCAAGGCATCAAATTGCTTGATCAAGTTTTCTGGGTTTGCCATCTAAA
ACTTTCATATTCATTTCTTTCAGATCCTCCAGTCTTTATGTCATCGCCAC
ATTTCTACCAAGGATACCCAGCATTGTGGCAATCTTTCAACGGGCTACAT
CCTGAGACAGATTTGCACGAAACGTATTTAAGTATTGAACCGGTAAGAAG
AGTCCATTTTCGACCAATAAACCACCACTCGCGTAGAATTTCAGCCCCCC
CACCCAACCTTTACTTTGTGAAATTAGGACACTCAGAGTTCCTGGTTAAA
ACGAAAATTTCTTGATGAAAAACTTGATGGTTCATACATTACAATCCGTT
ATTACCTTACATGATTTCGTTTTTTAAGAAAATATATAAACTTTATAAGA
TTAGAAAGAATCACAATTTTTGCCCTGTTCTGTTTTTTAAATTGCCAATA
CCTAAAGATAGACCTTTCACCAGCTTTCACGATAAATGAGGAACCAATCT
ATGTTCTTCTGTTTATAGACAACTGGGATTGTCATGGATGCACACAAACG
TCTTCAAATCAACGTCAATATTCAAAAAGTCCCTTATATTTCGTAAGTTA
AAAGTTACGTAGCTGAATAATCTTCTGTCTAAAGGGCTGGAAGTAAAGAA
GTAAATTAAGTAATCGAATTTAGTGCTCCGCTTCCTTTACGATCATGATG
AAAAAAATTTATCATAATTCAGATTCCATATTGTCTTTCAGGAGAACAGA
TGTATTTCCAGAGCAAGATAATTTTTATCCTGTTTTGTTTGTGCATGAGG
TAAGTAAACAAATAATTCCTGGTAGTAGCAAACTTTGAATGGTGAATTTA
ACTCTGCCAAATCTCGTTTTGGTGAAGAGTTAAATGTAAAGTGTATTCAT
TTCTATTATTGAAAACAATGAAATTTAGGGAAGCTCTAAATTGACGATGT
CTTTAGCTAGGGTTTAAAAAAAGCCAGTAACTAACTTATTTTGGACAAGC
GCTAGTTGTTTAAATGTTATGACATTGATGATTTCAATCATTATTACTTA
CTCAGTATGCCACCATTGACAAAGCATCAGCAGATAGGTTCAAGAAAGAA
GTAATGTTACCAAAGCAGATGATCACTATAATGGAATATGGTTTGATCGG
CCTGGGTGGCCTCTTTCTCATCATTGCTCTTGTATTGGGTGCAAGACATC
AAAGAAAAAAGAATCAACAATCCGTCTATACAGAAGTAAGTTTTTGACTC
CTTTTTACATCAGGAGTGCTCATCTCCTTAATAGAGCATTGTAGGGATGA
CATCTTGGAACATTGTCTTCCATCATTGGAAGCGTCGTGTTTCTTCTCTC
CTTTGAAGCCGTTACACTTACCACGATATCTGTTTTTTTACAAAGAATCC
TACTCATGATGCCCTCTACTATAATTGATATGGTTTGATTCTTGAATTGA
ATGTCAGCTTCCATTCATTACTCTTTTATCGTCAGTGGTTTAATAAGGAC
TAATTTTCTTCTTTACCTGCACTCTACGCTTTTTCTTCACTCCAGTAATA
TTCTTTATATTATTTGATTTCAGTTTTCGAATGAGGACAATGAAAAGAAC
ATACAACAG Coding sequence (CDS) from alignment at sc0000144_pilon:463172..468080- >XLOC_039392 ID=XLOC_039392|Name=XLOC_039392|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3228bp|location=Sequence derived from alignment at sc0000144_pilon:463172..468080- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGAAGAAAAAGGTGGTCGTTGCTGTCGATGCTGCACGACTGTTGT
CACAATTTCCATTCTCATTGTTGTCAGTGTTCTTCTCATCTGTTTGGGAG
CTGGATCCATCCCTTTTCTCACCAACTTTTATAAAGATACAGTACTAAAG
ATGGGTGAAGAAAAAGGTGGTCGTTGCTGTCGATGCTGCACGACTGTTGT
CACAATTTCCATTCTCATTGTTGTCAGTGTTCTTCTCATCTGTTTGGGAG
CTGGATCCATCCCTTTTCTCACCAACTTTTATAAAGATACAGTACTAAAG
CAATTGGTGATGAAATATTCGGATTCTTCTGGAGGGAACGAAGCTTACAA
GAATTGGAATTCTCCTCCAGCACCTGTCTACATGCAGTTTTATATGTTTA
ATTACACGAATGTTGACGAAATCATCAATGAAAAAGCTAAACCCAATGTC
ACTCAACTCGGCCCATACTCCTACAGCAATTGGTGATGAAATATTCGGAT
TCTTCTGGAGGGAACGAAGCTTACAAGAATTGGAATTCTCCTCCAGCACC
TGTCTACATGCAGTTTTATATGTTTAATTACACGAATGTTGACGAAATCA
TCAATGAAAAAGCTAAACCCAATGTCACTCAACTCGGCCCATACTCCTAC
AGAGAGGTCCGTGAGAATGTGATCCTTCACCAAAATGAAAATGAAATCAC
TTACTTACAAAATTATTCATACGTATTCGACCCTGCTACTTCATGTGCTA
ACTGCTCAGAAAATGATACGATCATCACTCCGAACCTTGCTGTCATCAGA
GGTCCGTGAGAATGTGATCCTTCACCAAAATGAAAATGAAATCACTTACT
TACAAAATTATTCATACGTATTCGACCCTGCTACTTCATGTGCTAACTGC
TCAGAAAATGATACGATCATCACTCCGAACCTTGCTGTCATCACATTTCA
AGCGAAATTGAAGGATTTGAACATCACACCACAATCAGGATTTGTCAAGA
GATGGGCCATTGAAGCTTTAGATAAACTGTTGAATAATGACAAAACGTAC
AAAATGTTCATACCTTTGCCAGTGCATGAACTGTTATGGGGATACACCAG
TCCATTCCTCGATCACCTGGAAGGTCTCATACCAAAAGTCATACGGAACC
TCATTCCGAACCTACCCCCGCCTTTTATAGCTTTACAGACATTTCAAGCG
AAATTGAAGGATTTGAACATCACACCACAATCAGGATTTGTCAAGAGATG
GGCCATTGAAGCTTTAGATAAACTGTTGAATAATGACAAAACGTACAAAA
TGTTCATACCTTTGCCAGTGCATGAACTGTTATGGGGATACACCAGTCCA
TTCCTCGATCACCTGGAAGGTCTCATACCAAAAGTCATACGGAACCTCAT
TCCGAACCTACCCCCGCCTTTTATAGCTTTACAGCAAAACGGTACAGCAG
GTGCAGTGGCAGTTGGAAATATCACCATTCTTACGGGCAAGGAAGATATC
AATAAAGTTCAAATAACAACTAAATGGAGGGGGAAAAACAAAACGGTACA
GCAGGTGCAGTGGCAGTTGGAAATATCACCATTCTTACGGGCAAGGAAGA
TATCAATAAAGTTCAAATAACAACTAAATGGAGGGGGAAAAATTCCACAG
GTTCTTGGAATGGAGACGAGTTTACAAATTTTTGGCAAACACCTTATGGC
AATATGATCAATGGAACAGTTCCACAGGTTCTTGGAATGGAGACGAGTTT
ACAAATTTTTGGCAAACACCTTATGGCAATATGATCAATGGAACAGATGG
ATCCCACTTTCAACCTTACATCTCGAAAGATGACGTCATTTACATTTTCA
ATCCTCAGTTATGCAGATGGATCCCACTTTCAACCTTACATCTCGAAAGA
TGACGTCATTTACATTTTCAATCCTCAGTTATGCAGGTCGTTGTATTTGA
ATTATCAGAGAGATACAAGCATTATGGACATCAAATTATTACGCTACACA
ACGAGGGCGAAAATCTTCCAAAATTACACTGCCAACCCAGACAACAAAGC
TTTCTGTGGTCCGAAACGTTGTTATCCAAGTGGCCTGTTACCAGTGGGAC
AGTGCCAGCCTGGCAGTCGTTGTATTTGAATTATCAGAGAGATACAAGCA
TTATGGACATCAAATTATTACGCTACACAACGAGGGCGAAAATCTTCCAA
AATTACACTGCCAACCCAGACAACAAAGCTTTCTGTGGTCCGAAACGTTG
TTATCCAAGTGGCCTGTTACCAGTGGGACAGTGCCAGCCTGGCAATCCTC
CAGTCTTTATGTCATCGCCACATTTCTACCAAGGATACCCAGCATTGTGG
CAATCTTTCAACGGGCTACATCCTGAGACAGATTTGCACGAAACGTATTT
AAGTATTGAACCGATCCTCCAGTCTTTATGTCATCGCCACATTTCTACCA
AGGATACCCAGCATTGTGGCAATCTTTCAACGGGCTACATCCTGAGACAG
ATTTGCACGAAACGTATTTAAGTATTGAACCGACAACTGGGATTGTCATG
GATGCACACAAACGTCTTCAAATCAACGTCAATATTCAAAAAGTCCCTTA
TATTTCACAACTGGGATTGTCATGGATGCACACAAACGTCTTCAAATCAA
CGTCAATATTCAAAAAGTCCCTTATATTTCGAGAACAGATGTATTTCCAG
AGCAAGATAATTTTTATCCTGTTTTGTTTGTGCATGAGGAGAACAGATGT
ATTTCCAGAGCAAGATAATTTTTATCCTGTTTTGTTTGTGCATGAGTATG
CCACCATTGACAAAGCATCAGCAGATAGGTTCAAGAAAGAAGTAATGTTA
CCAAAGCAGATGATCACTATAATGGAATATGGTTTGATCGGCCTGGGTGG
CCTCTTTCTCATCATTGCTCTTGTATTGGGTGCAAGACATCAAAGAAAAA
AGAATCAACAATCCGTCTATACAGAATATGCCACCATTGACAAAGCATCA
GCAGATAGGTTCAAGAAAGAAGTAATGTTACCAAAGCAGATGATCACTAT
AATGGAATATGGTTTGATCGGCCTGGGTGGCCTCTTTCTCATCATTGCTC
TTGTATTGGGTGCAAGACATCAAAGAAAAAAGAATCAACAATCCGTCTAT
ACAGAATTTTCGAATGAGGACAATGAAAAGAACATACAACAGTTTTCGAA
TGAGGACAATGAAAAGAACATACAACAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000144_pilon | genome | sc0000144_pilon:463172..468080 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1579-1614:37 |
| Aaloc | 1399-1578:555 |
| Aaloc | 1342-1398:868 |
| Aaloc | 1267-1338:1092 |
| Aaloc | 1150-1266:1535 |
| Aaloc | 970-1146:1908 |
| Aaloc | 901-966:2299 |
| Aaloc | 823-897:2501 |
| Aaloc | 718-819:2982 |
| Aaloc | 472-717:3480 |
| Aaloc | 328-471:4166 |
| Aaloc | 151-324:4534 |
| Aaloc | 1-150:4910 |
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