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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000144_pilon:435941..437605+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039390 ID=XLOC_039390|Name=XLOC_039390|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1665bp|location=Sequence derived from alignment at sc0000144_pilon:435941..437605+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGTGAAAAAATATGTGCTTCGCAAAACCAGAGAACTTTTATATAC
CGATACTTTCCAACTTAAAAAACGTTTAGTTGTGATGTCGTTCGTGCTAC
GTTATTTTTTGATGGGAGTTGAATATTCTATCATTTTACCAACTGCTCTC
TTATACATGAAAACTTTTAATGCTGGCCCTTTTATGACAGGCTTGACGAT
AGCCGCCTACCCCGCCGCTGCTTGCATCAGCCTTCCTATCTTTGGATATC
TTTATGATCGAACAAAGAGGCTGAAAGAACTTTTGTTGATACTCAATCTC
TTCGAAGCTATCGGTAATTTAATCTATGCGCTTCCATTTTCGATAGCAAT
GCCGTTACTTGGACGATTTATTGCTGGAATTGGGGATGGGTTCCTTGCAT
TGACTGTCGGAGAATTAACCTATCTAtatgaagaaaaacaaagactTGGA
ATATTATCTATACTAGAGTTTGGACGTGTGTTAGGACTTATTATAGGAcc
aagtttcaattttttgattgaaggAAGGTACGTGGTGATAGACAGTTGGG
TATTGAACAATAACACGTTGCCAGGTGTCATCATGGCGATCTTGTGGTTA
ATGATGGAGTTCCTAACTGTCTTTGTTGTTTTCAACCTAGCAAAAGATCT
GATCGCTTTGAATAAACCAAAGGATGTCGATGACACAACAGCGTTATTGA
AAAGCATGGATACTGAGCCTATAGAAGGAGTTGGGGAGGACTTGAGAGAA
AGTGAGCTCTCCGACAATGAAGATTCAAAACTGGACATTCAGACAAATCC
GCCAAGTCGTCCTCCTTCTCTTCATAGTTCAAACGAATCGTTATTCCATC
CGACGTtagaaaaacaacattttgataAGAAGCTCCCTTTGGAAGATGAT
GAGCAGAGCATTAGTAGTAACGAAAGCAGTTTCTCCGACATCCGTGATAA
AGATGAAATCAACGATGTTGGGCATGGTATTTTCCACGAGAAACATTTCA
AAAAGTTCACAGAATACTGGAACTCCATCAAAGAAATCCTTTGTTTTGAA
TTCCTCGTAATCACAGCCACTGATTTCACGTTATGGTTCTGTCAGACCAA
TTTCGAAATCCTTGCTCCTTATATTACTGAATTTGATTATGGGTGGACAC
CACAGATGACTGGTATGATTTACGTGGTGGGCGGTTTCCTCATCATTATC
GTGTTTCTACTGATGTATTTCTTGAGTGCAAAATGTGCTGTTAAGGATTC
GTATTTGCTGCTGACAGCACTGATCGCTACACAAATTTCACTGGTTCTGT
TGGTATACGAAGCAAACTTAACGAACATTCCCACGCGTGAGACATTATTT
GCAATTATCAGTGTTTTTGTATTCTTCACAATCCCTTTAAATTTAGTCTG
CTCAAAAACATTACTATCCAAACTTTTCCACCCTGACAGGATGGGAGCAG
TACAGGGACTTTCGTCGGGGATTTCCCGAATCACAATGATCATAGGGCCC
ATCATCAGTGGATATATCTTCAAACATCGCATCATTTATGCCAGTGTGAC
GTCAGTCTTTCTCTTCATAACAGTGATTGGCTTCTTCTCCTGCATCAACA
AAATCCACAAACGTATAAGAAGTCTGAGACGTGAACTTCGCGTCAGCTCC
TCCAAAAGACGTTAA Coding sequence (CDS) from alignment at sc0000144_pilon:435941..437605+ >XLOC_039390 ID=XLOC_039390|Name=XLOC_039390|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3330bp|location=Sequence derived from alignment at sc0000144_pilon:435941..437605+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGTGAAAAAATATGTGCTTCGCAAAACCAGAGAACTTTTATATAC
CGATACTTTCCAACTTAAAAAACGTTTAGTTGTGATGTCGTTCGTGCTAC
GTTATTTTTTGATGGGAGTTGAATATTCTATCATTTTACCAACTGCTCTC
TTATACATGAAAACTTTTAATGCTGGCCCTTTTATGACAGGCTTGACGAT
AGCCGCCTACCCCGCCGCTGCTTGCATCAGCCTTCCTATCTTTGGATATC
TTTATGATCGAACAAAGAGGCTGAAAGAACTTTTGTTGATACTCAATCTC
TTCGAAGCTATCGGTAATTTAATCTATGCGCTTCCATTTTCGATAGCAAT
GCCGTTACTTGGACGATTTATTGCTGGAATTGGGGATGGGTTCCTTGCAT
TGACTGTCGGAGAATTAACCTATCTAtatgaagaaaaacaaagactTGGA
ATATTATCTATACTAGAGTTTGGACGTGTGTTAGGACTTATTATAGGAcc
aagtttcaattttttgattgaaggAAGGTACGTGGTGATAGACAGTTGGG
TATTGAACAATAACACGTTGCCAGGTGTCATCATGGCGATCTTGTGGTTA
ATGATGGAGTTCCTAACTGTCTTTGTTGTTTTCAACCTAGCAAAAGATCT
GATCGCTTTGAATAAACCAAAGGATGTCGATGACACAACAGCGTTATTGA
AAAGCATGGATACTGAGCCTATAGAAGGAGTTGGGGAGGACTTGAGAGAA
AGTGAGCTCTCCGACAATGAAGATTCAAAACTGGACATTCAGACAAATCC
GCCAAGTCGTCCTCCTTCTCTTCATAGTTCAAACGAATCGTTATTCCATC
CGACGTtagaaaaacaacattttgataAGAAGCTCCCTTTGGAAGATGAT
GAGCAGAGCATTAGTAGTAACGAAAGCAGTTTCTCCGACATCCGTGATAA
AGATGAAATCAACGATGTTGGGCATGGTATTTTCCACGAGAAACATTTCA
AAAAGTTCACAGAATACTGGAACTCCATCAAAGAAATCCTTTGTTTTGAA
TTCCTCGTAATCACAGCCACTGATTTCACGTTATGGTTCTGTCAGACCAA
TTTCGAAATCCTTGCTCCTTATATTACTGAATTTGATTATGGGTGGACAC
CACAGATGACTGGTATGATTTACGTGGTGGGCGGTTTCCTCATCATTATC
GTGTTTCTACTGATGTATTTCTTGAGTGCAAAATGTGCTGTTAAGGATTC
GTATTTGCTGCTGACAGCACTGATCGCTACACAAATTTCACTGGTTCTGT
TGGTATACGAAGCAAACTTAACGAACATTCCCACGCGTGAGACATTATTT
GCAATTATCAGTGTTTTTGTATTCTTCACAATCCCTTTAAATTTAGTCTG
CTCAAAAACATTACTATCCAAACTTTTCCACCCTGACAGGATGGGAGCAG
TACAGGGACTTTCGTCGGGGATTTCCCGAATCACAATGATCATAGGGCCC
ATCATCAGTGGATATATCTTCAAACATCGCATCATTTATGCCAGTGTGAC
GTCAGTCTTTCTCTTCATAACAGTGATTGGCTTCTTCTCCTGCATCAACA
AAATCCACAAACGTATAAGAAGTCTGAGACGTGAACTTCGCGTCAGCTCC
TCCAAAAGACGTTAAATGTCAGTGAAAAAATATGTGCTTCGCAAAACCAG
AGAACTTTTATATACCGATACTTTCCAACTTAAAAAACGTTTAGTTGTGA
TGTCGTTCGTGCTACGTTATTTTTTGATGGGAGTTGAATATTCTATCATT
TTACCAACTGCTCTCTTATACATGAAAACTTTTAATGCTGGCCCTTTTAT
GACAGGCTTGACGATAGCCGCCTACCCCGCCGCTGCTTGCATCAGCCTTC
CTATCTTTGGATATCTTTATGATCGAACAAAGAGGCTGAAAGAACTTTTG
TTGATACTCAATCTCTTCGAAGCTATCGGTAATTTAATCTATGCGCTTCC
ATTTTCGATAGCAATGCCGTTACTTGGACGATTTATTGCTGGAATTGGGG
ATGGGTTCCTTGCATTGACTGTCGGAGAATTAACCTATCTAtatgaagaa
aaacaaagactTGGAATATTATCTATACTAGAGTTTGGACGTGTGTTAGG
ACTTATTATAGGAccaagtttcaattttttgattgaaggAAGGTACGTGG
TGATAGACAGTTGGGTATTGAACAATAACACGTTGCCAGGTGTCATCATG
GCGATCTTGTGGTTAATGATGGAGTTCCTAACTGTCTTTGTTGTTTTCAA
CCTAGCAAAAGATCTGATCGCTTTGAATAAACCAAAGGATGTCGATGACA
CAACAGCGTTATTGAAAAGCATGGATACTGAGCCTATAGAAGGAGTTGGG
GAGGACTTGAGAGAAAGTGAGCTCTCCGACAATGAAGATTCAAAACTGGA
CATTCAGACAAATCCGCCAAGTCGTCCTCCTTCTCTTCATAGTTCAAACG
AATCGTTATTCCATCCGACGTtagaaaaacaacattttgataAGAAGCTC
CCTTTGGAAGATGATGAGCAGAGCATTAGTAGTAACGAAAGCAGTTTCTC
CGACATCCGTGATAAAGATGAAATCAACGATGTTGGGCATGGTATTTTCC
ACGAGAAACATTTCAAAAAGTTCACAGAATACTGGAACTCCATCAAAGAA
ATCCTTTGTTTTGAATTCCTCGTAATCACAGCCACTGATTTCACGTTATG
GTTCTGTCAGACCAATTTCGAAATCCTTGCTCCTTATATTACTGAATTTG
ATTATGGGTGGACACCACAGATGACTGGTATGATTTACGTGGTGGGCGGT
TTCCTCATCATTATCGTGTTTCTACTGATGTATTTCTTGAGTGCAAAATG
TGCTGTTAAGGATTCGTATTTGCTGCTGACAGCACTGATCGCTACACAAA
TTTCACTGGTTCTGTTGGTATACGAAGCAAACTTAACGAACATTCCCACG
CGTGAGACATTATTTGCAATTATCAGTGTTTTTGTATTCTTCACAATCCC
TTTAAATTTAGTCTGCTCAAAAACATTACTATCCAAACTTTTCCACCCTG
ACAGGATGGGAGCAGTACAGGGACTTTCGTCGGGGATTTCCCGAATCACA
ATGATCATAGGGCCCATCATCAGTGGATATATCTTCAAACATCGCATCAT
TTATGCCAGTGTGACGTCAGTCTTTCTCTTCATAACAGTGATTGGCTTCT
TCTCCTGCATCAACAAAATCCACAAACGTATAAGAAGTCTGAGACGTGAA
CTTCGCGTCAGCTCCTCCAAAAGACGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000144_pilon | genome | sc0000144_pilon:435941..437605 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1665:1 |
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