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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:71380..73855+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039388 ID=XLOC_039388|Name=XLOC_039388|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2476bp|location=Sequence derived from alignment at sc0000023_pilon:71380..73855+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCTCGATGACAAGTGTGAGAAGTTAAACATGACTGAGGTCGGTCG
GAAACTTCAAAGCGAAGGTGCTCTGCACTACAGTTCCTGCCTGAAAAGTC
ACGAAGCCCTACTTGAACTCCATTTACGCGATATTGTTGTTCCTGTCGAA
AGTCGTGTTGAAGATTTGAGGAAAGAGATCGATAACGAAATGAAGGGAAC
ACACAGAATGCCAGCTCTGTTGCACAATACTGGCAAATATCGCTTTGCTG
AAGTTGGAATGTGCGATTACGAGGTGCTTCCAGTCGAACCATTGCACGCA
ATAGGTCACCATATCAATAATCTTTTCGAGGAAATCCCAAGACACCTTCC
GAAAAAAGAACGGGGCGTATTTGAGAGAACTTTGAAAGCTGCTTTTTCTT
CAAGGCAAGTCAAAAGAGGGAAAGATTACCGAAATGCATTGCTCCAATTA
ACGACGGCCGTTGATGGACGAATTGATGACAAGATAGTCCAGATTCTGAT
TTCTCTATGCGAGATACAGGAAATCCTCTACTCGAACGAGAGGTCCGCTG
AATTGATTTTGCGGCTGTACAACGTGACATTTGTTCATGCCATGAAAATG
ATCGTGGCTTTCGAAACGACTGAGAAGTTGACGAAGCGAAAATTGTTCGG
CCAGTATTTTCACGCACTTGTTTGCCATGCTCCAGAGCAATTCCGCATAA
TTCCAATGCCCTCATCAAATGCCGAAGATGAGGAAAGGTTCTTTAATTTC
CTCAAAACATGCACGAAGTGTACTTCCAATCATCATCCGGAAAATGTCTT
GGACAACTGCTTTATTCGCTGCCAAGTACGTGAAGAAATCAAGTCCGACA
AGGATggctgtaaaagaaaaaaaagagagtCATCAATCTCTAAGTCTGGC
AAGAAGCTTCCACCCAAGACCGAAACTATAATCCCTTTCCGATTCATCAC
AAAGTTCCCTAGGATATGGCAAGCTCATTTAGAGAGGATAGCTGATTTTT
TAGTTGTCAAAGGCATTTGGACAGAAATGACCGATGGCATCAAGTTTAGC
GACCTGAAAAAGCTCAATCTCCCTATCAGTCATTTTCGAGATACAACAAT
TAAGCAGGAGTTGGTCCGTGTTAAAGAAGTGTGGTCAGATCTCCTCAAAA
GCTCTCCTTCTCAAATTCCTGCCTATGAGATCATTGATGATGACGGAAAG
AAGACAAACTTCCTTGTAACCctaaatcatttcaaaaaacaagCTGAAAA
AGGTAAGAAATTATATAAGTTTCTTCGACTAAGGTTCCAGCAGAAGTTTA
TACTTTGTTTTACTAACATTCCAAATGCCTGCTTCAATTGAATGATAATT
TTAATAGAAACCTATCAGCACTTTACTCTCAGAATTTTTAAAGTTAGAAA
GACTTCCAATTTCTTTATAGCAAATTCGACAAAGCAAAAGAAGGTAGATC
TCAACGTTACCCCCTCAACTATGATCGCAAACATGCAGCTGAAGAGCCCG
CCTGAATCAGGTACAGAGCGCCACATAATGTGGTCTTTTATAAATGCACT
ttagattaaaaaaattcaactagGTCAAATACTTTATCTTCTCCAGTGTA
AACCTGGACAGGAttcaagaattttaaaaatatttctgttTAGGTAAAAC
CAAGACAACGTTTGCATCTTCAACTCCATGCAACTCTATGGGCCAGCAAA
AATCTTGTGAgttaattttgtttcaaaaataacagACCGAGGCAAATAAT
TACTTTGGTATAGACAGTACTAATCCTTTTGCATCATCAAtcttaaaatg
aagatttaacAGTTTCCTTGATTTTATATTgtacaatattttcttttttt
tagcaTTTCCCAAGTACATCAAGTCAAACTATACTGGAAAAAATGTGGCT
GAAGCTGCTAAAGTTGATGGTAAATTCTCCATTATAAATTAGATTTTAAG
GGTTAAACATATTTCTCTGCATGCTACCGATTGCTGGCTCTTCAGCAATG
TATTAAACAATCTGTATCTTTGTTTTAGACACACCCATAGATCTTCAAAT
TTCAGATGTTCCCATGTATCATACCCAGGCAACCCCTGGACCAAGTCATG
AACGTTCATGTAAGTTTCAcaagttttatattttctagCAGTAAAATTAT
TTCTTACCAATGTCCCATGTACACTGTCACACCAATTTTCTTCATTCATA
ACATTGCGACTTATGACATTTTTaaccttaaaaaaagaaatttaacagaa
tgaatttttcttgtaaattttaccagcaataaaaatcttcagtttcAGAC
GTATCAATGATACAAGACCACTCAACACCAGGACCAAGCCATGATAACTC
TAGTAAGTTTCACCAGATTTCTCTAGCTTGATGTAGAACACTAAGAATAT
TTGTTTTACCTATTTCACATTTTGGTACACTAGTTCTTGTATTTGTAGCA
TCACAAAAGCTGATCACAACTTCAAC Coding sequence (CDS) from alignment at sc0000023_pilon:71380..73855+ >XLOC_039388 ID=XLOC_039388|Name=XLOC_039388|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1986bp|location=Sequence derived from alignment at sc0000023_pilon:71380..73855+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCTCGATGACAAGTGTGAGAAGTTAAACATGACTGAGGTCGGTCG
GAAACTTCAAAGCGAAGGTGCTCTGCACTACAGTTCCTGCCTGAAAAGTC
ACGAAGCCCTACTTGAACTCCATTTACGCGATATTGTTGTTCCTGTCGAA
AGTCGTGTTGAAGATTTGAGGAAAGAGATCGATAACGAAATGAAGGGAAC
ACACAGAATGCCAGCTCTGTTGCACAATACTGGCAAATATCGCTTTGCTG
AAGTTGGAATGTGCGATTACGAGGTGCTTCCAGTCGAACCATTGCACGCA
ATAGGTCACCATATCAATAATCTTTTCGAGGAAATCCCAAGACACCTTCC
GAAAAAAGAACGGGGCGTATTTGAGAGAACTTTGAAAGCTGCTTTTTCTT
CAAGGCAAGTCAAAAGAGGGAAAGATTACCGAAATGCATTGCTCCAATTA
ACGACGGCCGTTGATGGACGAATTGATGACAAGATAGTCCAGATTCTGAT
TTCTCTATGCGAGATACAGGAAATCCTCTACTCGAACGAGAGGTCCGCTG
AATTGATTTTGCGGCTGTACAACGTGACATTTGTTCATGCCATGAAAATG
ATCGTGGCTTTCGAAACGACTGAGAAGTTGACGAAGCGAAAATTGTTCGG
CCAGTATTTTCACGCACTTGTTTGCCATGCTCCAGAGCAATTCCGCATAA
TTCCAATGCCCTCATCAAATGCCGAAGATGAGGAAAGGTTCTTTAATTTC
CTCAAAACATGCACGAAGTGTACTTCCAATCATCATCCGGAAAATGTCTT
GGACAACTGCTTTATTCGCTGCCAAGTACGTGAAGAAATCAAGTCCGACA
AGGATggctATGTCGCTCGATGACAAGTGTGAGAAGTTAAACATGACTGA
GGTCGGTCGGAAACTTCAAAGCGAAGGTGCTCTGCACTACAGTTCCTGCC
TGAAAAGTCACGAAGCCCTACTTGAACTCCATTTACGCGATATTGTTGTT
CCTGTCGAAAGTCGTGTTGAAGATTTGAGGAAAGAGATCGATAACGAAAT
GAAGGGAACACACAGAATGCCAGCTCTGTTGCACAATACTGGCAAATATC
GCTTTGCTGAAGTTGGAATGTGCGATTACGAGGTGCTTCCAGTCGAACCA
TTGCACGCAATAGGTCACCATATCAATAATCTTTTCGAGGAAATCCCAAG
ACACCTTCCGAAAAAAGAACGGGGCGTATTTGAGAGAACTTTGAAAGCTG
CTTTTTCTTCAAGGCAAGTCAAAAGAGGGAAAGATTACCGAAATGCATTG
CTCCAATTAACGACGGCCGTTGATGGACGAATTGATGACAAGATAGTCCA
GATTCTGATTTCTCTATGCGAGATACAGGAAATCCTCTACTCGAACGAGA
GGTCCGCTGAATTGATTTTGCGGCTGTACAACGTGACATTTGTTCATGCC
ATGAAAATGATCGTGGCTTTCGAAACGACTGAGAAGTTGACGAAGCGAAA
ATTGTTCGGCCAGTATTTTCACGCACTTGTTTGCCATGCTCCAGAGCAAT
TCCGCATAATTCCAATGCCCTCATCAAATGCCGAAGATGAGGAAAGGTTC
TTTAATTTCCTCAAAACATGCACGAAGTGTACTTCCAATCATCATCCGGA
AAATGTCTTGGACAACTGCTTTATTCGCTGCCAAGTACGTGAAGAAATCA
AGTCCGACAAGGATggctATGTCCCATGTACACTGTCACACCAATTTTCT
TCATTCATAACATTGCGACTTATGACATTTTTaacATGTCCCATGTACAC
TGTCACACCAATTTTCTTCATTCATAACATTGCGACTTATGACATTTTTa
acCTATTTCACATTTTGGTACACTAGTTCTTGTATTTGTAGCATCACAAA
AGCTGATCACAACTTCAACCTATTTCACATTTTGGTACACTAGTTCTTGT
ATTTGTAGCATCACAAAAGCTGATCACAACTTCAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:71380..73855 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 928-993:2411 |
| Aaloc | 862-924:2162 |
| Aaloc | 1-858:1 |
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