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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000144_pilon:459795..462129+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039385 ID=XLOC_039385|Name=XLOC_039385|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2335bp|location=Sequence derived from alignment at sc0000144_pilon:459795..462129+ (Clytia hemisphaerica_ch_hm2_pilon)
ACCTCCAAAAATTGGTTAGcttctttcaaaaaagatttcatttccaCTGT
GGCGTTGAACAGGTTTATGAGGTTCGTTGGGAGGAGAACAAAGTCCAGAA
TGAAGGTTTTTGTGGGGATTTTGTGCTTAGTGGTGGTTTTAGAAGCGGCC
CCACGGAGCGTTTTGATGAGACATTTAGTGAGAACTTTGGGAGATTTTTC
GACTTTTCAACAAACTGGTGACGAAACAGCCGAGGCGGCGGATGATGGAG
ACACCATCCCTCTCCAGCATCATAATTATCAAATGACCAAAGAAAAGATG
GAGAACATCACCAAACAGTGCCCAGATATAACCAAGATGTACAGTGTTGG
TCAATCAGTTGAAGGACGAGAGTTGTATGTCATGGTCATCTCAGACTCGC
CCAATAAACACAAACCAGGAAATCCAGAATTCAAATATGTCAGCACTATG
CATGGAAACGAGGTTGTCGGGAAAGAATTGTTGTTGAATTTGATGCAGAA
GTTTTGCGATAATTACGGAAAAGATGAGAAGATGACGGGATTGGTTCGAT
CGGTGAGGATGCATTTTATGCCCTGTATGAATCCTGATGGGTACGAGAAA
GCTTACAATGACGGTGGCAAAGATTGGTTGCTGGGCAGGTCCAACGCAAA
TAATAAAGATTTGAACCGAAACTTCCCTGATCAATACATCAAGAATAAGG
ATAATTCTGAGCAAGAGCCCGAAACGCGTGAAGTCATGGATTGGATTTGC
AATGAGGAAAATCCATTCGTGTTATCGGCAAATCTGCATGGTGGTTCACT
TGTAGCCAACTACCCTTACGACGATACTAAAGAACAGAAGACGGAATATT
CCGCTAGTCCTGATGATGATGTGTTCCGGTCATTAGCAACCTTTTACTCG
GATGAGCACAAAACAATGCATCTGAAAGAACCGGAATGGGACTGCCCGGA
TGTTCCGGTTGATAAGTTCGACCATGGAATCACTAACGGTGCTAAATGGT
ACAACGTTGCTGGTGGAATGCAAGATTTCAACTATTTGCGCTGTGGATGC
ATGGAGCTGACATTGGAGTTGGGCTGCGATAAATTTCCGAAAGCTCACAA
ACTGCAAAAGTATTGGAACGATAACAAGAAGGCTTTGGTCAGCTTTATTG
GACAGGTAAgattcttttgtttatcaaaatcTCCTTCCCCTATCATAGAC
ATTCCAGAATACCAAGGCCTCTGAGACCtttttttAGGTATTCGTGCATT
TGTTACATGCTTTTTCTATTCAGGGGAAAATGCACAATTATGTGccaatt
ttctttcaagaaagGCATAGCTAAACagtaattttttgtcttcattcGAT
TGACATGGGAACTCGAGGACACTTTTTCATTGTGGTTCTCTTTATAAAAC
CTACATCATTAAAAAGTTGACAACTGCAGGGAGGGAGAAATAAAATCATG
TACAGTTacctctcgctaattcgaaaattccaaaaattttcttcgaacta
cagaaagattcgaaataaAGAAAGTATTTTGTACTGGTTTCTAGCTGAGC
AGAGCTGAGTGGACAAATaccttcgaattatagaaagattcgaatagtag
aggttcgaattagagagagttgattgTACTAAAAACAAGATTCTTATTAA
AAAGACTCCCTAGTGGTTCCAATAGTAAGAAATCGAGCATAAATCATCTC
GATTGTtcaaacatttaaaatattAAACCTTTCTTTTCCAGGCGAAAAAG
GGAGTCAAGGGATTTGTGAGAGATGCAGAAACAAAAGACACAATCGAGGG
AGCGATTATAACGGTAGAAGATCGACAACACGATGTACGCTCGCATTCCA
GCGGAGATTATTTCCGACTGTTGTTGCCAGGTACATACACTTTGACCGCA
CGAAAAGATAATTACAATCCAATCCAAAAAACAGTGGTAATTAAACCCAA
CAGTGATGCTGTAGAATTGGATTTCCTtatggaaaaatcagaaaaccatC
AACCCGATACGGGATTACAACAACTGATCCAAGCTAACACCGAACAACCC
GATAACTCACTTTTGAAACAGATTCAAAACATCGATCAGCAATTATTAAC
CCATTCTTCTCAGACAGATCCTAATAACGAGTTCGGTCAATTTTCACCAT
CTGTCAGCATCGGAGGTTTAAGCACCCACGAGAACACGCCAAAGGGCGCC
GATAGTGAAGAAAGTATGAATGAATTTTTGAACAATAATAGCAAAGAGGA
TGATCAAATCATGAACGACTTTGATCTCGAGAAACAAGATTTTTTCGACC
AAAAAACTGATCTCCAGACTTCTGACCAGGCTTAA Coding sequence (CDS) from alignment at sc0000144_pilon:459795..462129+ >XLOC_039385 ID=XLOC_039385|Name=XLOC_039385|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3498bp|location=Sequence derived from alignment at sc0000144_pilon:459795..462129+ (Clytia hemisphaerica_ch_hm2_pilon)
ACCTCCAAAAATTGGTTAGcttctttcaaaaaagatttcatttccaCTGT
GGCGTTGAACAGGTTTATGAGGTTCGTTGGGAGGAGAACAAAGTCCAGAA
TGAAGGTTTTTGTGGGGATTTTGTGCTTAGTGGTGGTTTTAGAAGCGGCC
CCACGGAGCGTTTTGATGAGACATTTAGTGAGAACTTTGGGAGATTTTTC
GACTTTTCAACAAACTGGTGACGAAACAGCCGAGGCGGCGGATGATGGAG
ACACCATCCCTCTCCAGCATCATAATTATCAAATGACCAAAGAAAAGATG
GAGAACATCACCAAACAGTGCCCAGATATAACCAAGATGTACAGTGTTGG
TCAATCAGTTGAAGGACGAGAGTTGTATGTCATGGTCATCTCAGACTCGC
CCAATAAACACAAACCAGGAAATCCAGAATTCAAATATGTCAGCACTATG
CATGGAAACGAGGTTGTCGGGAAAGAATTGTTGTTGAATTTGATGCAGAA
GTTTTGCGATAATTACGGAAAAGATGAGAAGATGACGGGATTGGTTCGAT
CGGTGAGGATGCATTTTATGCCCTGTATGAATCCTGATGGGTACGAGAAA
GCTTACAATGACGGTGGCAAAGATTGGTTGCTGGGCAGGTCCAACGCAAA
TAATAAAGATTTGAACCGAAACTTCCCTGATCAATACATCAAGAATAAGG
ATAATTCTGAGCAAGAGCCCGAAACGCGTGAAGTCATGGATTGGATTTGC
AATGAGGAAAATCCATTCGTGTTATCGGCAAATCTGCATGGTGGTTCACT
TGTAGCCAACTACCCTTACGACGATACTAAAGAACAGAAGACGGAATATT
CCGCTAGTCCTGATGATGATGTGTTCCGGTCATTAGCAACCTTTTACTCG
GATGAGCACAAAACAATGCATCTGAAAGAACCGGAATGGGACTGCCCGGA
TGTTCCGGTTGATAAGTTCGACCATGGAATCACTAACGGTGCTAAATGGT
ACAACGTTGCTGGTGGAATGCAAGATTTCAACTATTTGCGCTGTGGATGC
ATGGAGCTGACATTGGAGTTGGGCTGCGATAAATTTCCGAAAGCTCACAA
ACTGCAAAAGTATTGGAACGATAACAAGAAGGCTTTGGTCAGCTTTATTG
GACAGACCTCCAAAAATTGGTTAGcttctttcaaaaaagatttcatttcc
aCTGTGGCGTTGAACAGGTTTATGAGGTTCGTTGGGAGGAGAACAAAGTC
CAGAATGAAGGTTTTTGTGGGGATTTTGTGCTTAGTGGTGGTTTTAGAAG
CGGCCCCACGGAGCGTTTTGATGAGACATTTAGTGAGAACTTTGGGAGAT
TTTTCGACTTTTCAACAAACTGGTGACGAAACAGCCGAGGCGGCGGATGA
TGGAGACACCATCCCTCTCCAGCATCATAATTATCAAATGACCAAAGAAA
AGATGGAGAACATCACCAAACAGTGCCCAGATATAACCAAGATGTACAGT
GTTGGTCAATCAGTTGAAGGACGAGAGTTGTATGTCATGGTCATCTCAGA
CTCGCCCAATAAACACAAACCAGGAAATCCAGAATTCAAATATGTCAGCA
CTATGCATGGAAACGAGGTTGTCGGGAAAGAATTGTTGTTGAATTTGATG
CAGAAGTTTTGCGATAATTACGGAAAAGATGAGAAGATGACGGGATTGGT
TCGATCGGTGAGGATGCATTTTATGCCCTGTATGAATCCTGATGGGTACG
AGAAAGCTTACAATGACGGTGGCAAAGATTGGTTGCTGGGCAGGTCCAAC
GCAAATAATAAAGATTTGAACCGAAACTTCCCTGATCAATACATCAAGAA
TAAGGATAATTCTGAGCAAGAGCCCGAAACGCGTGAAGTCATGGATTGGA
TTTGCAATGAGGAAAATCCATTCGTGTTATCGGCAAATCTGCATGGTGGT
TCACTTGTAGCCAACTACCCTTACGACGATACTAAAGAACAGAAGACGGA
ATATTCCGCTAGTCCTGATGATGATGTGTTCCGGTCATTAGCAACCTTTT
ACTCGGATGAGCACAAAACAATGCATCTGAAAGAACCGGAATGGGACTGC
CCGGATGTTCCGGTTGATAAGTTCGACCATGGAATCACTAACGGTGCTAA
ATGGTACAACGTTGCTGGTGGAATGCAAGATTTCAACTATTTGCGCTGTG
GATGCATGGAGCTGACATTGGAGTTGGGCTGCGATAAATTTCCGAAAGCT
CACAAACTGCAAAAGTATTGGAACGATAACAAGAAGGCTTTGGTCAGCTT
TATTGGACAGGCGAAAAAGGGAGTCAAGGGATTTGTGAGAGATGCAGAAA
CAAAAGACACAATCGAGGGAGCGATTATAACGGTAGAAGATCGACAACAC
GATGTACGCTCGCATTCCAGCGGAGATTATTTCCGACTGTTGTTGCCAGG
TACATACACTTTGACCGCACGAAAAGATAATTACAATCCAATCCAAAAAA
CAGTGGTAATTAAACCCAACAGTGATGCTGTAGAATTGGATTTCCTtatg
gaaaaatcagaaaaccatCAACCCGATACGGGATTACAACAACTGATCCA
AGCTAACACCGAACAACCCGATAACTCACTTTTGAAACAGATTCAAAACA
TCGATCAGCAATTATTAACCCATTCTTCTCAGACAGATCCTAATAACGAG
TTCGGTCAATTTTCACCATCTGTCAGCATCGGAGGTTTAAGCACCCACGA
GAACACGCCAAAGGGCGCCGATAGTGAAGAAAGTATGAATGAATTTTTGA
ACAATAATAGCAAAGAGGATGATCAAATCATGAACGACTTTGATCTCGAG
AAACAAGATTTTTTCGACCAAAAAACTGATCTCCAGACTTCTGACCAGGC
TTAAGCGAAAAAGGGAGTCAAGGGATTTGTGAGAGATGCAGAAACAAAAG
ACACAATCGAGGGAGCGATTATAACGGTAGAAGATCGACAACACGATGTA
CGCTCGCATTCCAGCGGAGATTATTTCCGACTGTTGTTGCCAGGTACATA
CACTTTGACCGCACGAAAAGATAATTACAATCCAATCCAAAAAACAGTGG
TAATTAAACCCAACAGTGATGCTGTAGAATTGGATTTCCTtatggaaaaa
tcagaaaaccatCAACCCGATACGGGATTACAACAACTGATCCAAGCTAA
CACCGAACAACCCGATAACTCACTTTTGAAACAGATTCAAAACATCGATC
AGCAATTATTAACCCATTCTTCTCAGACAGATCCTAATAACGAGTTCGGT
CAATTTTCACCATCTGTCAGCATCGGAGGTTTAAGCACCCACGAGAACAC
GCCAAAGGGCGCCGATAGTGAAGAAAGTATGAATGAATTTTTGAACAATA
ATAGCAAAGAGGATGATCAAATCATGAACGACTTTGATCTCGAGAAACAA
GATTTTTTCGACCAAAAAACTGATCTCCAGACTTCTGACCAGGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000144_pilon | genome | sc0000144_pilon:459795..462129 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1156-1749:1742 |
| Aaloc | 1-1155:1 |
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