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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000027_pilon:2135185..2137939- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039357 ID=XLOC_039357|Name=XLOC_039357|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2755bp|location=Sequence derived from alignment at sc0000027_pilon:2135185..2137939- (Clytia hemisphaerica_ch_hm2_pilon)
GCATCTGACGAGGCTACGTTAAAAGGTTTAAATGACTTACTGGATGAGTT
CTTTGGACCAACCAGCAACAATGACAGGAAACGGCAAATAGGTAATTCTT
TTCCAAAGGAATGTATTAGGGTCGTATATATGTTGTTTGTAGGAAGAAAT
ATAACAATTGTCCATACTTTCTCTTTCTATGTGATATGCTCAAGAAAAAA
ACCTGAAATGCCTCTAGTTGGAATATCCACTTTTGAACAGCAAAGTCCTT
AGGGCCAAAATCTCATATTCGTATTCATGCAATATCACATAATATGATAC
CATTTGAAAGTTTTCAAAATAGAATACTTTTATCAGGTATAACTTCCTCA
CTCGGGATTCAAATTGAAGTTTATCTTTACTTTGCTTGACAAAATGACCA
TAAACCACTAAATTTCTAATGTTTCTTTTACCAGAAGAACTTTTGAATAA
TTTTGGTTTACAAGACGGAGCATGGAGACAGTGTATCTATTTCTTGACCA
AGTCGTCCAATCAATATGTTCAGATGTATTCTTTCAGTATTTTTGAGGTA
TTTTTATTTTTATTATAGATCTCAAAAATATAAATTTGACCTGTGTATCC
CTGGATTGAATAATTGATATTTTGGCTAGTAACCATATACTCAAAATTCT
TGAGAAGGACAATTTGAAAAGCTGGTGGCATATGTTATTATTATCTATCA
AGAATTAGTGTAGGAACAACATGGGCCTTGTCACTAAGTTAGGAAATATT
CAAATCCTACAGTTCTTCCAGCCTTAGTCTACACTTTGTGAAAACTACTG
CTCCACTCAATCATAAAGAATTGTATAATTTTTTGTTTGTTTTTTTAGAA
CCTTATAAATCAGAGATGGCATGGTCTACTGGGTGAAGACAAACAACAGA
TTCGTAAATTTCTTTACAATTACATGGTCAATAAGTATAATGCAGTGCCA
CCTTTTATCCGTAACAAATCCATCAAATCAGTGGTCATCATCGGACGTTA
TGATTGGCCAATGTTTTATCCAAACTTCTTCTCGAATATAATCAAAGTAA
GTTTAAATGTTGGGACCGAATTTTCTGAAAGGGTTCAAGATTTTTTAAAG
ATATTCGAGAAACAAAATACACAACTTCCGTTTTGTTATTAAGAGGGTTT
ATGGTCAAATGACACACCAATTCAACGATTTTCCAAGATTTCCGTGCATA
TTCACATAAGCTAGTTGCAACACCTGGGTATAGTCAATGTTTATGGAGCT
GTTTTAAGGAGATACGCTAGTTTTGGAATAGGCTTCTAGCTTTACTGGAG
AGTAAAGAGGGAGTGCCATTCAAATACTGAATGATTTTATACGGTAATTG
GTGTTATCTTTCAACTAAAACAAGAGTTTTTTGCTGGGTACTTTACAGTA
AGGTTCTTCCAAAATGGCATTCTATTCATGGCTGATTTTGAATACCACAA
TAGAATGCAGCTGCTGAAAATCTAAAATGTTTACATTTTTCTTAATTCTA
GCTTTTGCAAAATCCTGACACATCCTTGGTTGGTGTACTAGCTCTACAAA
TGATCTCAGAAGAATTCATCTCACCCAGGGAAGACTTGAGCATGCAACGG
CGACAAGAACTGAAAGAATCCTTATTACAACATATTCCCAATGCACTACA
CATTTTAACAGAACTACTCACATCTATATCACACAAGTTTAAACATATCG
TCAGCACAGTTACACCACCGCCCTCGCCTATACAACGCTCACCCTACACC
ACGCCCAACCATTCACCCATACACCGTCTCACTGTTCCCGGCTCCACCAC
GTCGCCGCAAAAGATTGAGGCCGTCGTCATGTCAGCTCAGTCAGAGGAGC
TTTGTATAGCGATTTTTGACTGTTTAACACAATATATTTCTTGGTTGCCA
CTTTCACGTTTCATTACGCCCAGCCTTGTGACAAAGATTTTCAACTACGC
AGAATACGGATGTAATCTAGCTGTCATGAAAGGTTCAGATAAAGTGATTG
GGACGAAAGTAGGTCAGTAGACATTTACTTTAAAGATTCTTAGATTTTCA
GGCTTTTCGTTAACAGTTTAGAGTAATAACTAGAAAAGTTTTGACAAATT
TCAGCCTTCAAAATGTTTTTATAATCTGGGATATCTGAATTGAAATTCTG
AAAATCGATATTATCCATATTCTCCCATTTCGCAGACGCTGCTCGTATGC
ATCTCCATTGAATCTCCTTATTTTCAGCTAAAATTAACAATTTGAAAATT
ATAATCCTCTCAGGACCACAGAAGTAATAAAATTTCTAACAATTTAGGGC
TACTTAGACTACACAATATATTGATGAGCAATAGTCGACAATATAGTTTT
CGGACCGTAATGTACGGAGTAAACAACATGTGCTCTATTATAAACAATTA
AGTATGGGAACACGATTCAGAGGTTTTCCTCAACTGAAACAAATGTATTG
GTCAGAAAGGACGTCTTTCCCAGAATAAGCAAATAGAATGCTTTGTGGAT
AAGAAATATACTTTAATGTTGGTCATGGTTAGACTTTGAATAAGTCAATA
GAATTATACTTTTCCTCTTTTTCTAGGTATCAATGCTATGAGTTGCATCA
ACGAGATCCTATCAAAGAAGTTCATCCCCGCAGAATACGAATCATTCCTC
TTCCAAATGTTTCAACAGACTTTCAAACTGCTACAAGTGATGACGTCTGG
CAGTGAAGGAGGGGTTCTCAAAACTGTCGATGAGAGGTGTGATTTCGTTG
TTTGA Coding sequence (CDS) from alignment at sc0000027_pilon:2135185..2137939- >XLOC_039357 ID=XLOC_039357|Name=XLOC_039357|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2184bp|location=Sequence derived from alignment at sc0000027_pilon:2135185..2137939- (Clytia hemisphaerica_ch_hm2_pilon)
GCATCTGACGAGGCTACGTTAAAAGGTTTAAATGACTTACTGGATGAGTT
CTTTGGACCAACCAGCAACAATGACAGGAAACGGCAAATAGGCATCTGAC
GAGGCTACGTTAAAAGGTTTAAATGACTTACTGGATGAGTTCTTTGGACC
AACCAGCAACAATGACAGGAAACGGCAAATAGAAGAACTTTTGAATAATT
TTGGTTTACAAGACGGAGCATGGAGACAGTGTATCTATTTCTTGACCAAG
TCGTCCAATCAATATGTTCAGATGTATTCTTTCAGTATTTTTGAGAAGAA
CTTTTGAATAATTTTGGTTTACAAGACGGAGCATGGAGACAGTGTATCTA
TTTCTTGACCAAGTCGTCCAATCAATATGTTCAGATGTATTCTTTCAGTA
TTTTTGAGAACCTTATAAATCAGAGATGGCATGGTCTACTGGGTGAAGAC
AAACAACAGATTCGTAAATTTCTTTACAATTACATGGTCAATAAGTATAA
TGCAGTGCCACCTTTTATCCGTAACAAATCCATCAAATCAGTGGTCATCA
TCGGACGTTATGATTGGCCAATGTTTTATCCAAACTTCTTCTCGAATATA
ATCAAAAACCTTATAAATCAGAGATGGCATGGTCTACTGGGTGAAGACAA
ACAACAGATTCGTAAATTTCTTTACAATTACATGGTCAATAAGTATAATG
CAGTGCCACCTTTTATCCGTAACAAATCCATCAAATCAGTGGTCATCATC
GGACGTTATGATTGGCCAATGTTTTATCCAAACTTCTTCTCGAATATAAT
CAAACTTTTGCAAAATCCTGACACATCCTTGGTTGGTGTACTAGCTCTAC
AAATGATCTCAGAAGAATTCATCTCACCCAGGGAAGACTTGAGCATGCAA
CGGCGACAAGAACTGAAAGAATCCTTATTACAACATATTCCCAATGCACT
ACACATTTTAACAGAACTACTCACATCTATATCACACAAGTTTAAACATA
TCGTCAGCACAGTTACACCACCGCCCTCGCCTATACAACGCTCACCCTAC
ACCACGCCCAACCATTCACCCATACACCGTCTCACTGTTCCCGGCTCCAC
CACGTCGCCGCAAAAGATTGAGGCCGTCGTCATGTCAGCTCAGTCAGAGG
AGCTTTGTATAGCGATTTTTGACTGTTTAACACAATATATTTCTTGGTTG
CCACTTTCACGTTTCATTACGCCCAGCCTTGTGACAAAGATTTTCAACTA
CGCAGAATACGGATGTAATCTAGCTGTCATGAAAGGTTCAGATAAAGTGA
TTGGGACGAAAGTAGCTTTTGCAAAATCCTGACACATCCTTGGTTGGTGT
ACTAGCTCTACAAATGATCTCAGAAGAATTCATCTCACCCAGGGAAGACT
TGAGCATGCAACGGCGACAAGAACTGAAAGAATCCTTATTACAACATATT
CCCAATGCACTACACATTTTAACAGAACTACTCACATCTATATCACACAA
GTTTAAACATATCGTCAGCACAGTTACACCACCGCCCTCGCCTATACAAC
GCTCACCCTACACCACGCCCAACCATTCACCCATACACCGTCTCACTGTT
CCCGGCTCCACCACGTCGCCGCAAAAGATTGAGGCCGTCGTCATGTCAGC
TCAGTCAGAGGAGCTTTGTATAGCGATTTTTGACTGTTTAACACAATATA
TTTCTTGGTTGCCACTTTCACGTTTCATTACGCCCAGCCTTGTGACAAAG
ATTTTCAACTACGCAGAATACGGATGTAATCTAGCTGTCATGAAAGGTTC
AGATAAAGTGATTGGGACGAAAGTAGGTATCAATGCTATGAGTTGCATCA
ACGAGATCCTATCAAAGAAGTTCATCCCCGCAGAATACGAATCATTCCTC
TTCCAAATGTTTCAACAGACTTTCAAACTGCTACAAGTGATGACGTCTGG
CAGTGAAGGAGGGGTTCTCAAAACTGTCGATGAGAGGTGTGATTTCGTTG
TTTGAGTATCAATGCTATGAGTTGCATCAACGAGATCCTATCAAAGAAGT
TCATCCCCGCAGAATACGAATCATTCCTCTTCCAAATGTTTCAACAGACT
TTCAAACTGCTACAAGTGATGACGTCTGGCAGTGAAGGAGGGGTTCTCAA
AACTGTCGATGAGAGGTGTGATTTCGTTGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000027_pilon | genome | sc0000027_pilon:2135185..2137939 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 919-1095:178 |
| Aaloc | 406-915:1255 |
| Aaloc | 208-405:1908 |
| Aaloc | 97-207:2320 |
| Aaloc | 4-93:2756 |
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