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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000027_pilon:2075080..2077293- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039353 ID=XLOC_039353|Name=XLOC_039353|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2214bp|location=Sequence derived from alignment at sc0000027_pilon:2075080..2077293- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGAGAAAATCAAAAAAGAAATGGCTCGTCTCTTTTTGGTAAGTTTAGA
GCGTAAAATTGACTGAAAATTGATCTCGTTAAGTCATTTGTACGGAATAT
ATGCTGTTCTTTACCAGGTGACGGGTTTCTCTTTGAAAGTGACTAGACGT
TTTTTATAAGAACAAACAATATAAGAACATAAAGCTTTTGATCTGGGGTA
ATTCAAAAACCTCAGTAAAAGCATGGATTTATCATAGAACTCTGGATACA
CAACGAGCTAGTTTTTTCATCGATTTCTCATGTTCTAGCCTTGTCCGCAG
TAATGAGATTATTGTTCACCCTCCTCCATTCACTAATAATTTTTCGTAAA
TTTTTTTTATTGCATTTTTCATCAAAACACAGCTATACAATTCCCAAATG
AGACTTAAAGATCTCTCAAGAGAGTCAAATGCATCAAAGATTTTCAAATC
ACTATGAAGCCAAGATACTCCAGTCTAACATATGTCAATCCTAGCTCTTC
CCAGGAAAAAATTGGAAAGATATTGCCAACCTTATTTTCAGCGTTATTCT
AGGCTTTTTACTCAATTTTTCTTGTTTGATGAAGTTTTTTTCACATTTAA
TTTCATAAATGTATTCGTTAAGCTTTCTTGCTTTCATTTTCAAAGTTGCA
TCGGGTAAATATACAAAAACAAGAGGTTACAGGACTTTTTAGAAATGGGA
TTATTAATCATTTTTCAAAATCAGGGACCTTCGAGCCGCCATGACAGTTG
TCCTTAGCGGACAAAGCTAGAACATTGATTGTTTTCTGAAAGAATGGAAA
TACAATGGTCGCTCTCCACCGTTTTATTTGATGTTTATCCAGAGCTCTAT
GATAAATCCACGGTAAAAGTTTGCGAGGTGACGGTTGTATCCAAGCCAAA
AATCGAAAATCGACCCTTTGAGAGAAAAGTTTTTTTCGAGACCCTTTGAG
ATTTTTAGTGATTATTCAGACTCTTTGAGAGACTAATCCATGAAATTGTA
CCTCTTTGAAGGAAGTTTTGAGGTATGAAACGTGGTACGCTTATGACTCG
CACATACCCGTAAATTTTTTTGCCTCAATACCAACCCCCACCGGGGTAAA
AGCCTAATATCTCTTTTCTTTCTAGGTTCATTTAGTTTGCTTACTACTCC
TCTTCGTCATTGACGTCAGTGACGGCCGACATGAAATGAGCCGACATTGT
CTTACCAAAGGACATCGTGGTTCCAAATCTTACACACTGACATTATGTTC
GTACTGTGCAGTAACTTATGACCATGGGGTTAACGTGTAAGTTACAATGA
GATACATCCGACTTTCTCCTAAATTCGAACCTATATTATTCAAATATTTC
TATTTCAGTTTTCGCGTACTAAACTATTAGTCCCCTCAGCTAAGTGGTTT
AAATTACTCTCTGTATATCGAAACTTTCTGTAATTCGAAGAAAGTTTTTT
AGCCCTTGATGATCGATTATATCCTATGTGGGATTGAAAATTGCGCAGAT
CGCGTGAAGACAGAAAATAATATTAACCGCCAAATATCGAAAGATTAATA
ACAGGAAAACAAAGGTAGCATTAGATTCAATATTATATATGTGGTAGTTG
GTTTCCTTTAACCAATGTTGTCTCTTTAAATGCTTTGTTTTTAAAAAAGA
GTGATATTGTTTGCTTACTCATCAATTTTAATTTACAAGCTATTCTCCAC
CGGTGTTGCAGGCGTTGTTGTTTGCAATTTTTAAAGGTTTTGTTTTTAAA
TAAGAACGCAAGCTTTTTCACATTGGATTAACAAGGATGTGGAGCAAGAT
TGATCAGAAAGAGAAAAAGAAAAACTATTTTTTGCTTACATCATCATAAT
ATAACAATAGGCAGACATGTCCTGATATGAAATATGTGTCTGATATGACT
GGAACACTTATGTAAAAATAAAACCTTTAAGGGTCTCTTTAGTAGTAAGC
CGGCTTCTGGAATAATTCTTTAACGATTTTACATTTTTTTTCAGTTTCCC
ACGAAGGACTGTTGAATTTGAATGTAAAGAAGACCAAAATCTTCATGGTA
CTTGTCTTAGTGGTGAAGGCTATTGTCTCCAGAAAAGTGTTGTTATTCCT
CTTCGTAAGACAAAGCCTGATGGAAGCACAGAAGATAAGGATTATGAAAT
GATGACTGCATGTCAATGTGAATGTGGAAGCGAATCTTATTTGGCTAATT
TTATAAAACAATAG Coding sequence (CDS) from alignment at sc0000027_pilon:2075080..2077293- >XLOC_039353 ID=XLOC_039353|Name=XLOC_039353|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=840bp|location=Sequence derived from alignment at sc0000027_pilon:2075080..2077293- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGAGAAAATCAAAAAAGAAATGGCTCGTCTCTTTTTGTTAGAGAAAAT
CAAAAAAGAAATGGCTCGTCTCTTTTTGGTTCATTTAGTTTGCTTACTAC
TCCTCTTCGTCATTGACGTCAGTGACGGCCGACATGAAATGAGCCGACAT
TGTCTTACCAAAGGACATCGTGGTTCCAAATCTTACACACTGACATTATG
TTCGTACTGTGCAGTAACTTATGACCATGGGGTTAACGTGTTCATTTAGT
TTGCTTACTACTCCTCTTCGTCATTGACGTCAGTGACGGCCGACATGAAA
TGAGCCGACATTGTCTTACCAAAGGACATCGTGGTTCCAAATCTTACACA
CTGACATTATGTTCGTACTGTGCAGTAACTTATGACCATGGGGTTAACGT
TTTCCCACGAAGGACTGTTGAATTTGAATGTAAAGAAGACCAAAATCTTC
ATGGTACTTGTCTTAGTGGTGAAGGCTATTGTCTCCAGAAAAGTGTTGTT
ATTCCTCTTCGTAAGACAAAGCCTGATGGAAGCACAGAAGATAAGGATTA
TGAAATGATGACTGCATGTCAATGTGAATGTGGAAGCGAATCTTATTTGG
CTAATTTTATAAAACAATAGTTTCCCACGAAGGACTGTTGAATTTGAATG
TAAAGAAGACCAAAATCTTCATGGTACTTGTCTTAGTGGTGAAGGCTATT
GTCTCCAGAAAAGTGTTGTTATTCCTCTTCGTAAGACAAAGCCTGATGGA
AGCACAGAAGATAAGGATTATGAAATGATGACTGCATGTCAATGTGAATG
TGGAAGCGAATCTTATTTGGCTAATTTTATAAAACAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000027_pilon | genome | sc0000027_pilon:2075080..2077293 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 202-420:220 |
| Aaloc | 40-198:1090 |
| Aaloc | 1-39:2215 |
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