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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000027_pilon:2053942..2059096- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039351 ID=XLOC_039351|Name=XLOC_039351|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5155bp|location=Sequence derived from alignment at sc0000027_pilon:2053942..2059096- (Clytia hemisphaerica_ch_hm2_pilon)
TTAATTGCATACTTTCAGGGTCACATGATATGGGACGTGACAATGCCGTC
GTTCTTGGGATACGTTTCCGGACTGCTTTGGAATCAAAACAACGTTGATT
CAACTACTTCACCAGTCACCACCAAATTCGAAGTGGAAGTTGGTCAACAA
CTCTGCAAATTGATGCGATTTGACGACACTAAAGTCAAACCATGGGGTCA
TTTGACAGGTTGCGGATCAATAGGCAATATAGAATCGATGTGGGCTGCCA
GAAACACTAAATTACATCCATTGGCTTTGAAAGATTCTTGTGCTGACCCT
CATTTTCCCGAATTGATTGGTATGGAAATTTGAAATAAGTGTTTTTAATT
AATACAGGAGGCTAAAATAGCAAATTTGGGACAAGATATTTTACATAAGA
TAATTCGAATCTTTGCAATAGATTTTAATTTGGTCTTTCACCGGTACGTT
TCGGATTGCCATGTGTTTACAAATAGTTCTTGATTCTCAAGTTTATAATG
CCAGATTTTAAGCATCCCAAACCATGGCTTTATTATAGAGGCTCTGGATA
AACATCAAATGAAATAGTGGAGAGCGGAGTATTGTCTTTAAATTGTTTCA
GAAAACAATCAATGTACAGGCTTTGTGCACATTTGTCATGGCGTCTCGAA
GGACTCTGGTTTTGAAAAATTATTAATACTCTTATTTCTAAAAAGTTCTA
TAACTTTTTCTGTTCGTACTTTTGCTGGCTAAAAGTTTGAAAATAAATGC
TAGAATACTAAGCGAATACATTTATGAAAATTTTGAATTGGGAATATCTT
TCCGATAATTCTCTGAGAAGAACTGAGATTGACATATATTAGACGTGAGT
CTCATAGCTATACTGTGGTGTAAAAATCTTTTGGTGGCACGTGGTGGCAC
GGTGGTTTTATAAGCTTGAAGTTTGAAAATTTCTGGTGTCGATATTTAAT
TTCAAAACATGTTTTTGCATCTTCCTCGCAATATAAAACAAGATAGAATA
TATCATTAGCACTTTGATGAGGAACTACAATAAGAAATACTACGAAAAAT
CATTTTATGGTGGAAGGATGGTGAACAATAATGTCATTACTACGGACAAG
GCTTGTGCATGAGAAATTGGCAAAAATCAGTCAGTTGTTTTTCCAGTGTC
GATAATAATTCCTTCCTCATGATTATGAGGGAAATTCGGGATAAATTTCC
CTTGGTCAATTTTGAAATGTTTTGAAATCTGACGAGTGCAACGAGGGAAA
TTTAAAACATTTCGAAATTTGACCGAGGGTAATCCCGTAATTTATCCAGA
ATTTCTCGAAAACAAACATGGGATTCCTGGTTAATCTCATGGTTTGGATT
GAAATTCTAACAATTCTAAAAGACGTCAATTTAACACTGGAAATCAATCT
GAAACTTTAAAAAGAGGTCTCAAAAAAGTCATAGAAACGTGAATTGAGTT
TTAATTGGATAGTATTCCATTTACTTAAGCCTTCGAAGTTAGTAAGAAAT
TCGAAAAAGGTGATGAATTTCTAAACGATGGAAATTTCACTTTTGCGGGA
AATTACATAAGCTTGGAGGGAAATTACAAGTTTGCAGGAAATTACAAATT
TACGTAAGCAAAAACGTCAATCGAATTTCAATCAACCATGAGATTAGAAT
CTTAATCGCACGATGGGTTATTTTTTCTTATTTGGCACACCCTCAAAGAG
AGCAATTAATCGTTAATTACATCCTGTAGAGCGCAATTAATCGTTAATAA
CACTCACCAATGCTGCGCCAATGTTTACAAAATTGATTTTAATGTTTTTT
CTTACATTTTTTTGCATCGAACGTTTTAATTGCATTCGAAATTTATTTAG
TGAGAAAGAAAATCAATAAGCAACAATAAAAGAAAGACATAAAGAGAAGA
GAAAAATAGAAAACTCAGTGTAATTTCTGTAATTTACTTTCCTAACTGGG
AAAAAGTAGTGACAGCCATTGCGCGATTAGCTCGTAATCACATAATAACT
CGTACAATTCGAAAATTGCACTCGTGATTCTTTTGTTTCGAATTTTCCTC
GTCATTTCGGACTCAGAAAATTAATAACAAAAAAATCACTCGTGCAATTA
TATTTGAATTGCACTTGTTATCATGTGATTACATATACTTATTTTCCAGA
CGGTTTGGAGTGCAAGGTATTTGTCCCTGGTCAACAGAAAGAAAAGACTT
TGAAAGAATGCACCGAATGGGAATTATTGAATTTGAGAATCGATGACATT
TGTATTTTGACTGATGACGTCATCAAATGTATCGAAGAGAGAAACCCGGA
TTTCAAAATTGACGTCAAAGTAACCGTTGACAAAGCTTTGGAGGTAAAAG
CTGTACTTTAAATTTTAACCCTTGATTTTGATTCCCACTAATTTTAAAAG
TAGACCCGAATTAAGTTCTAAGTTCTTGTTTTTTCATTTAGAAAAATTCA
CCAGTGCAGCTTGGCTTACCAGAATTTTACCGACGACACAAGATAGGTGA
ACCAAGCGCAAAAGATAGAGCACTGAGAACATATCCACGAGTCTTTTCAC
CAGGAACAAACCATTATTCATGGCCGAAAGCTTCCACCATTCTTGGCATC
GGTGGCTCTAATAACATTCAAATTCAAGTTGACAGCAAAGCTCGTCAAGA
TATTGAGAGTAAGTGCTACATTTTCAATATTGGAATGTAACATGGAAACC
AATCATTTTATGCAGTCCATATCTACAATACTGTAGAATTTTAGTGATGC
TCCTGCTTTGCAGGTTTTGAAAATCCTGTAAGATTTCTGTATATTTCCTC
TATTCCAAAGCTTATTCTGGGAACAGCATTTACTGTAAAAAAGATCACAG
ATAGGAATTTTTTTATTTCACGTGACAAGATTTCTAAAAGTAGCTTTATC
TTACAAACAGCTCTGGATAAGGAGCTAGATTATGCATTGGAACACAAGAT
TGCAGTATTCATGGTTGTGGCAGTGATCGGTTCAACAGAAGAAAGTGCTG
TGGATGATATCGCAAAAATCTTGGATCTCAAACTCAAATTTGAAGCCAAG
GTATAAATCGAATGTTTCCACTCTATCTATTTAGTGAAAAATATCTGCCT
ATCCATATTCGGTATAATGCAACCAACGAGCCTGAATGGAGCGAAATTGA
GTGATCCTTCATTTCAAACTTTCAAGTATTTTTACACTTTGTGACAAAAT
TCAAAAGGAATAAAGCTCCATTTCATAACAAATCATTATCTTTTCTAGCT
TTTGACCATCTTTTTTAGTTTATCTCAAATGTTTTTCATGCATTGTTTCC
AGATTTTGACATCTATAAACTGATTTTTCATCCAGGGTTTAACATTTTCG
GTGCACGCAGATGCAGCATGGGGTGGATATTTGAATTGTATGACCCACGA
AACTGGTGACAAAGAAAGTAACGTTTATTCCAATTGTCTTCCAACAAAAG
CTCACGATTTCGTTCCTGTTATTCCACTTTCTGATTTCGTCAAGAAACAA
TATATCAGCTTGCAGTTTGCTGATACAGGTTAGTGTGGAAAGATTACTTG
ACAACATTCTTTCTGAAGATTTTTTTCAATGTTTAAACTATAATCAATGA
ACATGTAAAATTTGTGCTTTCTTTACCAGGACTGGAGAGGACTGGAGAAA
CTAAATTATAAATTACTTCGTCAGGTCTTTTCAGAGTCTATTTTTCGAAG
CCAAGTAAGGGTATCAAAATAGATTTATTCGTTTTATTAGTAGTTTAGAA
TTATGTCGATTTCAAAGAAACTGGAAATCTGTATTTCTTTGGCACTGTTG
AGATATACTTACTCTTTTTGTGACTATTTCTTTCATTCTCAGTTACTATC
GATCCACACAAGTCTGGATTTTGTCCTTACCCTGCCGGTGCTCTTCTCTA
TAGAAACGGTACAATGAAAGGTTTCATCACACTTGCTGCACCAGAAGTTT
TCCACAACCCTGATGATTTAAATGTTGGAGTTTATGGTTTGGAAGGATCG
AAACCTGGAGCAGCAGCCTGTGGCGTTCTCTTGTCTCACCGGGTAAGGTC
GATCGTCTTGGCTAGACTTGTAATTCATACAGATAGTTCGGCTTATTGTA
CTTCTCTGAGATATTCTAAGGTAACTCGATAATGGAGGACCTGACGTATA
GTTCTCAATACTTTATGAGAAGGGGTAGCCCCTCAGATTCGCCTGACTTT
GTATTTCCACTCATTGGACTCCTTAGAGACTAACTGAATATCGAAGCTTC
CTGGCACTTAGATGCGATATCATGTCCTGTTATGTCATTTAAAGATCTCG
AAAGATGAACATTAATAGTTTTTTACTCTTTGCTCTCTTTACTAGGTCAT
TGGATTGGATCAAAATGGTTACGGTCGTATTCTTGGTCAATGTCAACTTG
GTGCTAAACTTTTCTACTGCATGTGGGAAACTGTCGCCAGAGATAACGAT
CCTTTCATTTGCTGCAACTTCATTCCACTGGATTTGAAAGAATTACAAGA
AAAAGGATTCTCATTCAAAACACAACAAGGCGTCCATGATTACATCAAGA
AACATATTATCGGTAAACCCAATGAACAACTTATTAAGAATGTCTACAAA
GAAATCGATTTCTTAGGAATCGTTGGTCCTGACGCTTTGATCAATTCGTT
CACCATCAACTGTAAAGATCAAAGCACTGGCAAAGGTCAAAAAAATATCG
AGTTGGTCAACGATTTGCAAAACCTCGTCTTCAATGAATCGACTTGTAAG
TATTTCGTTTTAGCTAAAAATATTTTCCATCTTGAAAAGTCAGAACGTCT
GAATTCGTCTTTTAATTTTACAACTTTTACAATGCAATAAGGTTTCTTTC
TTAAACTTAAAGTTTTTTTAAATGCTAGATTTTTTGAAGCATATGGAGAA
CGAGACAGGGTTGTAATACATTGGAAAATAATCAACATGTCATTAAGTTG
TATCCACTGTTTCTTTTTAGCGAGTGTTGGCGAAGACACTAAACGTGTCA
AAATGTTTTTGACAACATCTAAATTGGAATATGCAGATTATGGAAAAGCC
GTCCAACAATTGAAGGAGAGATTAAATTTGCCGACAGAAAGCACCCATGC
TGCACTTGGATTTATGAGGAACACTTGTATGGAACCGTATCAAGCAAGTG
AAGCT Coding sequence (CDS) from alignment at sc0000027_pilon:2053942..2059096- >XLOC_039351 ID=XLOC_039351|Name=XLOC_039351|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3696bp|location=Sequence derived from alignment at sc0000027_pilon:2053942..2059096- (Clytia hemisphaerica_ch_hm2_pilon)
TTAATTGCATACTTTCAGGGTCACATGATATGGGACGTGACAATGCCGTC
GTTCTTGGGATACGTTTCCGGACTGCTTTGGAATCAAAACAACGTTGATT
CAACTACTTCACCAGTCACCACCAAATTCGAAGTGGAAGTTGGTCAACAA
CTCTGCAAATTGATGCGATTTGACGACACTAAAGTCAAACCATGGGGTCA
TTTGACAGGTTGCGGATCAATAGGCAATATAGAATCGATGTGGGCTGCCA
GAAACACTAAATTACATCCATTGGCTTTGAAAGATTCTTGTGCTGACCCT
CATTTTCCCGAATTGATTGTTAATTGCATACTTTCAGGGTCACATGATAT
GGGACGTGACAATGCCGTCGTTCTTGGGATACGTTTCCGGACTGCTTTGG
AATCAAAACAACGTTGATTCAACTACTTCACCAGTCACCACCAAATTCGA
AGTGGAAGTTGGTCAACAACTCTGCAAATTGATGCGATTTGACGACACTA
AAGTCAAACCATGGGGTCATTTGACAGGTTGCGGATCAATAGGCAATATA
GAATCGATGTGGGCTGCCAGAAACACTAAATTACATCCATTGGCTTTGAA
AGATTCTTGTGCTGACCCTCATTTTCCCGAATTGATTGACGGTTTGGAGT
GCAAGGTATTTGTCCCTGGTCAACAGAAAGAAAAGACTTTGAAAGAATGC
ACCGAATGGGAATTATTGAATTTGAGAATCGATGACATTTGTATTTTGAC
TGATGACGTCATCAAATGTATCGAAGAGAGAAACCCGGATTTCAAAATTG
ACGTCAAAGTAACCGTTGACAAAGCTTTGGAGACGGTTTGGAGTGCAAGG
TATTTGTCCCTGGTCAACAGAAAGAAAAGACTTTGAAAGAATGCACCGAA
TGGGAATTATTGAATTTGAGAATCGATGACATTTGTATTTTGACTGATGA
CGTCATCAAATGTATCGAAGAGAGAAACCCGGATTTCAAAATTGACGTCA
AAGTAACCGTTGACAAAGCTTTGGAGAAAAATTCACCAGTGCAGCTTGGC
TTACCAGAATTTTACCGACGACACAAGATAGGTGAACCAAGCGCAAAAGA
TAGAGCACTGAGAACATATCCACGAGTCTTTTCACCAGGAACAAACCATT
ATTCATGGCCGAAAGCTTCCACCATTCTTGGCATCGGTGGCTCTAATAAC
ATTCAAATTCAAGTTGACAGCAAAGCTCGTCAAGATATTGAGAAAAAATT
CACCAGTGCAGCTTGGCTTACCAGAATTTTACCGACGACACAAGATAGGT
GAACCAAGCGCAAAAGATAGAGCACTGAGAACATATCCACGAGTCTTTTC
ACCAGGAACAAACCATTATTCATGGCCGAAAGCTTCCACCATTCTTGGCA
TCGGTGGCTCTAATAACATTCAAATTCAAGTTGACAGCAAAGCTCGTCAA
GATATTGAGACTCTGGATAAGGAGCTAGATTATGCATTGGAACACAAGAT
TGCAGTATTCATGGTTGTGGCAGTGATCGGTTCAACAGAAGAAAGTGCTG
TGGATGATATCGCAAAAATCTTGGATCTCAAACTCAAATTTGAAGCCAAG
CTCTGGATAAGGAGCTAGATTATGCATTGGAACACAAGATTGCAGTATTC
ATGGTTGTGGCAGTGATCGGTTCAACAGAAGAAAGTGCTGTGGATGATAT
CGCAAAAATCTTGGATCTCAAACTCAAATTTGAAGCCAAGGGTTTAACAT
TTTCGGTGCACGCAGATGCAGCATGGGGTGGATATTTGAATTGTATGACC
CACGAAACTGGTGACAAAGAAAGTAACGTTTATTCCAATTGTCTTCCAAC
AAAAGCTCACGATTTCGTTCCTGTTATTCCACTTTCTGATTTCGTCAAGA
AACAATATATCAGCTTGCAGTTTGCTGATACAGGGTTTAACATTTTCGGT
GCACGCAGATGCAGCATGGGGTGGATATTTGAATTGTATGACCCACGAAA
CTGGTGACAAAGAAAGTAACGTTTATTCCAATTGTCTTCCAACAAAAGCT
CACGATTTCGTTCCTGTTATTCCACTTTCTGATTTCGTCAAGAAACAATA
TATCAGCTTGCAGTTTGCTGATACAGTTACTATCGATCCACACAAGTCTG
GATTTTGTCCTTACCCTGCCGGTGCTCTTCTCTATAGAAACGGTACAATG
AAAGGTTTCATCACACTTGCTGCACCAGAAGTTTTCCACAACCCTGATGA
TTTAAATGTTGGAGTTTATGGTTTGGAAGGATCGAAACCTGGAGCAGCAG
CCTGTGGCGTTCTCTTGTCTCACCGGTTACTATCGATCCACACAAGTCTG
GATTTTGTCCTTACCCTGCCGGTGCTCTTCTCTATAGAAACGGTACAATG
AAAGGTTTCATCACACTTGCTGCACCAGAAGTTTTCCACAACCCTGATGA
TTTAAATGTTGGAGTTTATGGTTTGGAAGGATCGAAACCTGGAGCAGCAG
CCTGTGGCGTTCTCTTGTCTCACCGGGTCATTGGATTGGATCAAAATGGT
TACGGTCGTATTCTTGGTCAATGTCAACTTGGTGCTAAACTTTTCTACTG
CATGTGGGAAACTGTCGCCAGAGATAACGATCCTTTCATTTGCTGCAACT
TCATTCCACTGGATTTGAAAGAATTACAAGAAAAAGGATTCTCATTCAAA
ACACAACAAGGCGTCCATGATTACATCAAGAAACATATTATCGGTAAACC
CAATGAACAACTTATTAAGAATGTCTACAAAGAAATCGATTTCTTAGGAA
TCGTTGGTCCTGACGCTTTGATCAATTCGTTCACCATCAACTGTAAAGAT
CAAAGCACTGGCAAAGGTCAAAAAAATATCGAGTTGGTCAACGATTTGCA
AAACCTCGTCTTCAATGAATCGACTTGTCATTGGATTGGATCAAAATGGT
TACGGTCGTATTCTTGGTCAATGTCAACTTGGTGCTAAACTTTTCTACTG
CATGTGGGAAACTGTCGCCAGAGATAACGATCCTTTCATTTGCTGCAACT
TCATTCCACTGGATTTGAAAGAATTACAAGAAAAAGGATTCTCATTCAAA
ACACAACAAGGCGTCCATGATTACATCAAGAAACATATTATCGGTAAACC
CAATGAACAACTTATTAAGAATGTCTACAAAGAAATCGATTTCTTAGGAA
TCGTTGGTCCTGACGCTTTGATCAATTCGTTCACCATCAACTGTAAAGAT
CAAAGCACTGGCAAAGGTCAAAAAAATATCGAGTTGGTCAACGATTTGCA
AAACCTCGTCTTCAATGAATCGACTTCGAGTGTTGGCGAAGACACTAAAC
GTGTCAAAATGTTTTTGACAACATCTAAATTGGAATATGCAGATTATGGA
AAAGCCGTCCAACAATTGAAGGAGAGATTAAATTTGCCGACAGAAAGCAC
CCATGCTGCACTTGGATTTATGAGGAACACTTGTATGGAACCGTATCAAG
CAAGTGAAGCTCGAGTGTTGGCGAAGACACTAAACGTGTCAAAATGTTTT
TGACAACATCTAAATTGGAATATGCAGATTATGGAAAAGCCGTCCAACAA
TTGAAGGAGAGATTAAATTTGCCGACAGAAAGCACCCATGCTGCACTTGG
ATTTATGAGGAACACTTGTATGGAACCGTATCAAGCAAGTGAAGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000027_pilon | genome | sc0000027_pilon:2053942..2059096 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1666-1848:184 |
| Aaloc | 1264-1662:811 |
| Aaloc | 1066-1263:1312 |
| Aaloc | 871-1062:1821 |
| Aaloc | 733-870:2244 |
| Aaloc | 514-729:2715 |
| Aaloc | 322-513:3005 |
| Aaloc | 1-318:5156 |
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