|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000050_pilon:130199..132398+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039347 ID=XLOC_039347|Name=XLOC_039347|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2200bp|location=Sequence derived from alignment at sc0000050_pilon:130199..132398+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAaccttattttattttgttgctGTGTATTGCCATATTGGCATT
TTATTTCATGTTTGAGTCATGGAATCAAGATATACTGGACAAAAAATCGA
TACTCAACATTCAACCTTTACCGGTAGCAATTGAAGCTCAAGATTCTGTT
ACAGAAATACTTAAAAGTAAAATCATTTTGACCGCTAAAGAGaaaaaaag
gaagaatatTCATTTTCTGTATGAGGATGAAAAGGCGTATATAAGTAAGA
CGCCAACCGACAAAATTGTTTATCAACGTGCAGTAAACGATATGGCGTCC
ATTAAAACAGATACCTTATCGAGTAGTCTGAACTCTTCatttatgaattt
ttcaaaaagcttaaACAATCGGAAAGTCAAGAAGAGTGTTCAAAATTTTA
CTGCCAATATGAACATAAATGAAACAACAAACTCAGCTTATCTTAATGAT
ACCAGCTTTAAAAATCGAACCCAACaaaaaaaaagctcaaaaacgaTACT
AGTTTATACAAGATATTCAGAATCGAAAATATGGCCAAGAATGAAACCAA
CGGACCTTGTGAAAGAGCTTGACGGTTCTTCATGCGGTAACAGCATTTGT
AGTTTAACTTACAACAAGACAATGCTTTTGAAGAGTGATGCAGTGTTATT
TCACGAGCCTTACCTACCTTCCAGCATATTACTGAAACATCTAAGAGCGA
TTGTTCCAGAATCGCAATTTTGGATATGGAATTTACGGGAGCCTCCGACG
CATCTTACAAAAGATTTAAGTcgatataataatattttcaattggACTTG
TACGTATAGTCGAAAATCTGAAGTTTATGATCCTATTTTTCATATAGTTA
GTAAGGCGGGGAAGAAAACTTTGACAAGTCAAGATTTCTCTAAAGGCAGG
ACAAAGATGATTTTTGCAGCAATTAATAATTGTTTTGTTGAGAGAGTTTT
AATGATTAAACGATTAAAGAAATTGGTCTCGTTTGATGTTTATGGAgcat
gtggaagaaaagttGGAGATGCCAACCTACCACCATGTCCAAGGTAAATA
AAGAAATGATTTAAAACTGTTAGAAAACTATTAGAGCTTATTAAACACAG
AGCAGAGCAGCTAAACCAAAGCATTTCTCCAACCAATTCTCATCATGAAA
CTGCGAAAGTTTTAGATGAATACAAAATGGTAAAGTTGATCCTCGCTAAT
TCGAATGGGGATTCTTATTCGTTCGAACAACACAGGGAGATTCAAATTAT
AGTAAGTATTTCAAGTGGGGTTTCCCCCTatgcttctgctcatcctctag
cgaaaaaaatttcttatagaGGCTGCTTAGTACTCGGTAAATCCTCTTTC
CCACAAAATGCCGCTTCTCGCCGAAATTCGGCGAAAAGCCACCATAGCGG
GAAACCAATCCATACACTATTAAGCAGACCTCtaggaagtataggtctgc
gattcagactagtttCCCCCCTGACGGGAACtgagaataagttcgaatta
ttgaaagattcgaataatagaagttcaaataagcgagagtcaactgtatt
gaATATTCACAGATCTTGCAGCATAGTATAAGATAACCGCacctttctta
tactatgcttgcAGCTTGTAAAACACCATTAACCATGTCGTCATGCCACT
AAACAACTATTGAGGTAGGGGTGTAGAGATATCATAATTTGTCAAATCGA
ACTAAGATTTAgaatatttctattttaggtTTACTGAATCCTGTTCCAAG
ATAATGCGAAAATACCATTTCTATTTTGCAATGGAGAATTCGTACTGTGA
TAATTATATTACGGAGAAATATTATCAAAACGGTTTACTAAACGGTCTTA
TACCCATTGTCCTCGGTGGTGCACATTACGGAGATAATCGAGTGGCAATA
AGTCATAGTTATATCAATTTGCAAGATTTTGATAGCTTAGAAAATTTAAC
TAACTTTCTTGAATATCTTGCAAATAATAAGACAGCTTAtaacaaatatt
tttggtggagagatttttatgaaatcaaAAGACAATCAAAAGTATGTGCT
GTTTGTAAAAGACTTTGGGAATCAGAAAAAGCGGATAAGGAAATCGACAC
CACAAGTTACAATTCAACAACCGGACACGAGTTAAGTACGTTTTGGAGCG
taaagaaaaattgtaaaagttgGATGAAAATAATCTCGAAATATATTTAa
Coding sequence (CDS) from alignment at sc0000050_pilon:130199..132398+ >XLOC_039347 ID=XLOC_039347|Name=XLOC_039347|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3030bp|location=Sequence derived from alignment at sc0000050_pilon:130199..132398+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAaccttattttattttgttgctGTGTATTGCCATATTGGCATT
TTATTTCATGTTTGAGTCATGGAATCAAGATATACTGGACAAAAAATCGA
TACTCAACATTCAACCTTTACCGGTAGCAATTGAAGCTCAAGATTCTGTT
ACAGAAATACTTAAAAGTAAAATCATTTTGACCGCTAAAGAGaaaaaaag
gaagaatatTCATTTTCTGTATGAGGATGAAAAGGCGTATATAAGTAAGA
CGCCAACCGACAAAATTGTTTATCAACGTGCAGTAAACGATATGGCGTCC
ATTAAAACAGATACCTTATCGAGTAGTCTGAACTCTTCatttatgaattt
ttcaaaaagcttaaACAATCGGAAAGTCAAGAAGAGTGTTCAAAATTTTA
CTGCCAATATGAACATAAATGAAACAACAAACTCAGCTTATCTTAATGAT
ACCAGCTTTAAAAATCGAACCCAACaaaaaaaaagctcaaaaacgaTACT
AGTTTATACAAGATATTCAGAATCGAAAATATGGCCAAGAATGAAACCAA
CGGACCTTGTGAAAGAGCTTGACGGTTCTTCATGCGGTAACAGCATTTGT
AGTTTAACTTACAACAAGACAATGCTTTTGAAGAGTGATGCAGTGTTATT
TCACGAGCCTTACCTACCTTCCAGCATATTACTGAAACATCTAAGAGCGA
TTGTTCCAGAATCGCAATTTTGGATATGGAATTTACGGGAGCCTCCGACG
CATCTTACAAAAGATTTAAGTcgatataataatattttcaattggACTTG
TACGTATAGTCGAAAATCTGAAGTTTATGATCCTATTTTTCATATAGTTA
GTAAGGCGGGGAAGAAAACTTTGACAAGTCAAGATTTCTCTAAAGGCAGG
ACAAAGATGATTTTTGCAGCAATTAATAATTGTTTTGTTGAGAGAGTTTT
AATGATTAAACGATTAAAGAAATTGGTCTCGTTTGATGTTTATGGAgcat
gtggaagaaaagttGGAGATGCCAACCTACCACCATGTCCAAGATGAAGA
AaccttattttattttgttgctGTGTATTGCCATATTGGCATTTTATTTC
ATGTTTGAGTCATGGAATCAAGATATACTGGACAAAAAATCGATACTCAA
CATTCAACCTTTACCGGTAGCAATTGAAGCTCAAGATTCTGTTACAGAAA
TACTTAAAAGTAAAATCATTTTGACCGCTAAAGAGaaaaaaaggaagaat
atTCATTTTCTGTATGAGGATGAAAAGGCGTATATAAGTAAGACGCCAAC
CGACAAAATTGTTTATCAACGTGCAGTAAACGATATGGCGTCCATTAAAA
CAGATACCTTATCGAGTAGTCTGAACTCTTCatttatgaatttttcaaaa
agcttaaACAATCGGAAAGTCAAGAAGAGTGTTCAAAATTTTACTGCCAA
TATGAACATAAATGAAACAACAAACTCAGCTTATCTTAATGATACCAGCT
TTAAAAATCGAACCCAACaaaaaaaaagctcaaaaacgaTACTAGTTTAT
ACAAGATATTCAGAATCGAAAATATGGCCAAGAATGAAACCAACGGACCT
TGTGAAAGAGCTTGACGGTTCTTCATGCGGTAACAGCATTTGTAGTTTAA
CTTACAACAAGACAATGCTTTTGAAGAGTGATGCAGTGTTATTTCACGAG
CCTTACCTACCTTCCAGCATATTACTGAAACATCTAAGAGCGATTGTTCC
AGAATCGCAATTTTGGATATGGAATTTACGGGAGCCTCCGACGCATCTTA
CAAAAGATTTAAGTcgatataataatattttcaattggACTTGTACGTAT
AGTCGAAAATCTGAAGTTTATGATCCTATTTTTCATATAGTTAGTAAGGC
GGGGAAGAAAACTTTGACAAGTCAAGATTTCTCTAAAGGCAGGACAAAGA
TGATTTTTGCAGCAATTAATAATTGTTTTGTTGAGAGAGTTTTAATGATT
AAACGATTAAAGAAATTGGTCTCGTTTGATGTTTATGGAgcatgtggaag
aaaagttGGAGATGCCAACCTACCACCATGTCCAAGgtTTACTGAATCCT
GTTCCAAGATAATGCGAAAATACCATTTCTATTTTGCAATGGAGAATTCG
TACTGTGATAATTATATTACGGAGAAATATTATCAAAACGGTTTACTAAA
CGGTCTTATACCCATTGTCCTCGGTGGTGCACATTACGGAGATAATCGAG
TGGCAATAAGTCATAGTTATATCAATTTGCAAGATTTTGATAGCTTAGAA
AATTTAACTAACTTTCTTGAATATCTTGCAAATAATAAGACAGCTTAtaa
caaatatttttggtggagagatttttatgaaatcaaAAGACAATCAAAAG
TATGTGCTGTTTGTAAAAGACTTTGGGAATCAGAAAAAGCGGATAAGGAA
ATCGACACCACAAGTTACAATTCAACAACCGGACACGAGTTAAGTACGTT
TTGGAGCGtaaagaaaaattgtaaaagttgGATGAAAATAATCTCGAAAT
ATATTTAagtTTACTGAATCCTGTTCCAAGATAATGCGAAAATACCATTT
CTATTTTGCAATGGAGAATTCGTACTGTGATAATTATATTACGGAGAAAT
ATTATCAAAACGGTTTACTAAACGGTCTTATACCCATTGTCCTCGGTGGT
GCACATTACGGAGATAATCGAGTGGCAATAAGTCATAGTTATATCAATTT
GCAAGATTTTGATAGCTTAGAAAATTTAACTAACTTTCTTGAATATCTTG
CAAATAATAAGACAGCTTAtaacaaatatttttggtggagagatttttat
gaaatcaaAAGACAATCAAAAGTATGTGCTGTTTGTAAAAGACTTTGGGA
ATCAGAAAAAGCGGATAAGGAAATCGACACCACAAGTTACAATTCAACAA
CCGGACACGAGTTAAGTACGTTTTGGAGCGtaaagaaaaattgtaaaagt
tgGATGAAAATAATCTCGAAATATATTTAa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050_pilon | genome | sc0000050_pilon:130199..132398 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1045-1515:1730 |
| Aaloc | 1-1041:1 |
|
