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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000027_pilon:2049077..2050637+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039342 ID=XLOC_039342|Name=XLOC_039342|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1561bp|location=Sequence derived from alignment at sc0000027_pilon:2049077..2050637+ (Clytia hemisphaerica_ch_hm2_pilon)
AATTATCATGCATGTAAAGATAAAGAATTTGGTGTCTATGATACTGTTAG
TAAAAACAACATCATAAACAAAACCGCCTTTGCTGAGATTGGGTTTTTGA
GTTGGAAGGgtgaaaaattgatttcaaatcaattcggAGAATTCAAAAGG
GGTATTAGTGGTTTTCAGGCGAAACGATCCACGAATGGTTTATTTGTACG
AAAGAAAACTGGGAAATATTCGAGTGTTTCACTACTTTATCCTAAACCTA
TGGGGTTTGAACAGGTAAATCCATCTGGTATTATGTTATGATTTTATATA
TATTCTCCTAGAGatgcaaaaaaactttcaattgtGTTGTGGGAAAAGAT
TTTGTTACTATACGCAGTTTTTATGATGATAAATGTTTTTTGTACAGCtc
gaatgaaattttcaatacaAGGTTTTTCGATACATCAATATCTTTTTATA
TAAGTTTAAAATCAACATAAATTTGCAATGGAGAAGCTAGACTTAGGtag
gtcggtttgaaaaatccatttCTCCGTTTTTCAATTCAGATCAAAGGAGT
AATTTATGGAGAAAGGTCAAGGTGTGATAAATACAACATCTCATCTTTTC
ATCTGTTTCAAGGAAAGTCAAGACTCGTTAATCTCGGTAAGTTTATTCAC
TCACAGGATAAGAATCTAACTGTTTTAGACACTTTGGTAAGGTACAAATT
TATTCCGGATTATAATTTCCAGCGTAGTgttttaaaatgaagaaaaaaaa
atagaccTTTCACAAATAACATCAACTTGCATCGAGTTCGAAGTAATTTT
ATGACAACTTCTACCTAAAAGATTATTTCAATTGCGCAATATTTTTTATG
TACCATAAatatcacagctcgaataaatatcgACCTCTGAAGACGAGGTT
TTTAtaatacaagatcttgtattaaAACGCTCGCAAAGTAGATATATTTC
AGCATTTGGCTTAGATGAGGCTTGTGAATCATGTTTGATTTGCTTTTTTA
GACAAGTGgtgagaaaatgaaaacttggcctctggtaCCCAGGGTACTTT
TTATTATCGTTTCAAATTGACGGAAGTGTTGGGTGATTTATCTCGAGAAG
TGTGTATTAGTTACAGTAATTTCATAAACCATTTTTCTCTAGATCTTAAT
CAATTCACCTTAGTCAATGCAACATCAAACTTCTGGGATTTGGACAACat
aatcaaattaaattcaaatcaaatcaatcttcTTAACCAGTCAATTTCGA
ACCAGACTTTCCAATATCAATACTGGCGAAAGAAACAATCAAATATTATT
GGAAACTCAGACGAAGTAATTGATTTGGTGACAAGGTCTGTAGAATATAA
AGGGAATACATTTGGTGTGGCCAAAACAGATGCTTCTAATTATATCACAC
TGGTACCACTACTGTTTATTAAACGCTTTGACCAGGATGGAACTGGTGGT
GATGGATATTCAAAACTGGAATATCGTGTTTACGAATATAACGAAGTTTT
AAACCAAACTCAAACTGATATGATTAATAAATTGACTAAAACATTCGATT
GCAAAATATAA Coding sequence (CDS) from alignment at sc0000027_pilon:2049077..2050637+ >XLOC_039342 ID=XLOC_039342|Name=XLOC_039342|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1560bp|location=Sequence derived from alignment at sc0000027_pilon:2049077..2050637+ (Clytia hemisphaerica_ch_hm2_pilon)
AATTATCATGCATGTAAAGATAAAGAATTTGGTGTCTATGATACTGTTAG
TAAAAACAACATCATAAACAAAACCGCCTTTGCTGAGATTGGGTTTTTGA
GTTGGAAGGgtgaaaaattgatttcaaatcaattcggAGAATTCAAAAGG
GGTATTAGTGGTTTTCAGGCGAAACGATCCACGAATGGTTTATTTGTACG
AAAGAAAACTGGGAAATATTCGAGTGTTTCACTACTTTATCCTAAACCTA
TGGGGTTTGAACAGAATTATCATGCATGTAAAGATAAAGAATTTGGTGTC
TATGATACTGTTAGTAAAAACAACATCATAAACAAAACCGCCTTTGCTGA
GATTGGGTTTTTGAGTTGGAAGGgtgaaaaattgatttcaaatcaattcg
gAGAATTCAAAAGGGGTATTAGTGGTTTTCAGGCGAAACGATCCACGAAT
GGTTTATTTGTACGAAAGAAAACTGGGAAATATTCGAGTGTTTCACTACT
TTATCCTAAACCTATGGGGTTTGAACAGATCAAAGGAGTAATTTATGGAG
AAAGGTCAAGGTGTGATAAATACAACATCTCATCTTTTCATCTGTTTCAA
GGAAAGTCAAGACTCGTTAATCTCGATCAAAGGAGTAATTTATGGAGAAA
GGTCAAGGTGTGATAAATACAACATCTCATCTTTTCATCTGTTTCAAGGA
AAGTCAAGACTCGTTAATCTCGATCTTAATCAATTCACCTTAGTCAATGC
AACATCAAACTTCTGGGATTTGGACAACataatcaaattaaattcaaatc
aaatcaatcttcTTAACCAGTCAATTTCGAACCAGACTTTCCAATATCAA
TACTGGCGAAAGAAACAATCAAATATTATTGGAAACTCAGACGAAGTAAT
TGATTTGGTGACAAGGTCTGTAGAATATAAAGGGAATACATTTGGTGTGG
CCAAAACAGATGCTTCTAATTATATCACACTGGTACCACTACTGTTTATT
AAACGCTTTGACCAGGATGGAACTGGTGGTGATGGATATTCAAAACTGGA
ATATCGTGTTTACGAATATAACGAAGTTTTAAACCAAACTCAAACTGATA
TGATTAATAAATTGACTAAAACATTCGATTGCAAAATATAAATCTTAATC
AATTCACCTTAGTCAATGCAACATCAAACTTCTGGGATTTGGACAACata
atcaaattaaattcaaatcaaatcaatcttcTTAACCAGTCAATTTCGAA
CCAGACTTTCCAATATCAATACTGGCGAAAGAAACAATCAAATATTATTG
GAAACTCAGACGAAGTAATTGATTTGGTGACAAGGTCTGTAGAATATAAA
GGGAATACATTTGGTGTGGCCAAAACAGATGCTTCTAATTATATCACACT
GGTACCACTACTGTTTATTAAACGCTTTGACCAGGATGGAACTGGTGGTG
ATGGATATTCAAAACTGGAATATCGTGTTTACGAATATAACGAAGTTTTA
AACCAAACTCAAACTGATATGATTAATAAATTGACTAAAACATTCGATTG
CAAAATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000027_pilon | genome | sc0000027_pilon:2049077..2050637 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 364-780:1145 |
| Aaloc | 265-360:540 |
| Aaloc | 1-264:1 |
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