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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000027_pilon:2025151..2028218+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039341 ID=XLOC_039341|Name=XLOC_039341|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3068bp|location=Sequence derived from alignment at sc0000027_pilon:2025151..2028218+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCGCAAAATGGATTTTACGATTACTCGGCAGCGGCCAGAGAAAG
CGATTTGGTGACATTGAAACAATGTTCAAAGAAAGAAGCCAATCGACGAG
ATGAAGATGGTAGGTgatacaacgttgttttaacgttataTAACGAGCAG
GTCGTTTTGATTCAAACCATCTTGGAACACGTTAACAGGTTTTTAGAAGA
ACAGATTATATATGAACATAACGCTTCGATGGCCATATTATTAAGAGcaa
gttgagaatattttaagccTTTGCGGAGTCTAAAACACTCGATTCCTTAG
GAAATTGGACGAAAATACACGAAATAGTGAACATAACTACATGTTAAAAA
CATCTTTAGGTtgcaaactcaaaaagttaagaacatccgaaagcttttGG
GTAtacttatgaaaaaacgtgtatcataaGAATCAGAAGATTTTTGCTGA
GTCTCAAAGTTTGTATGTTGTCTATATATTTGGACGAATCATTTATAGCT
CTACACACTATTTTGTTCTTTGTATTCCCAGGAATGACGCCAGTCCATTG
GGCTTCACTTTACGGAAATTTCGAAGCTTTGAAAATACTCATCAATGTTG
GGTAAGTGCCTATAATAAAGAAGGTTTCATTTACAATAAAACTTTGACCT
GCTTTGACATAACCACATTGTATAAAGATCGCTGTATTTGGACCGGGGTA
GTTCCCGCAGAGAAGCCTTTGTAGTAAAATTctgcctaacgacaaacggc
gctacatcactaTTGTACAAGCGAAGGTAGTTCTAGCGCTGTCGATGCGG
ATAACACTCTCAAAAAGATCTCAACCAAAATAATTTGCTTGGCCAGGATT
GGGAAACTGCCTCCAGGGTCTATATAAAGCTAAGTGGTTattaccattga
gtttcaagtccgaagggctagagttgaatctctaacctttctcaggcaag
aaaaagtgaagccacttatttcccattcagaacGCGCCGCAacggttctt
ttgtttttgaggactgtatttcttaaaatctagcgatagattttactttt
gtttcaatctggcgtttgtgtaaaaaccacgcacAGGCGTTCTGGATGTG
AAATGAAGTAGCttcaggagtctcgagtctagcccttcgggcttggaagt
caatggttaTTATCATCATTACATATATTATAACAATAgtgttcagtttg
aggtcgttgttgttattttctgctcgcgtagtttgattattcgcccgata
gtgtcatttgggcccgacgcgaagcggaaATGACGTTATTGCCCTATACC
CGGCCCGTTAAtgacaatttgagtcacaaaacctttcaataccgcccgcc
gattgaacctttaatggctaacttaatgaccgctatatggataataatat
cTAATTACGCCTAATCTTTTCACAGTGGGAGTCCTGACAAACAAAACAAC
GAAGGAGCGTCATCACTCCATTTAGCAGCAGGTAATGGTCATTTACCTTG
TCTGGTATACTTGACCAACTTTGGTGGAAATGTTCACGCCTTAAATGACA
ACGGTGGTTCACCTATGCACGAGGCTGCTATGAAAGGCCAATTAGAGTGT
GTTCGACATCTAGAAGCTATAGTTACACATCAGGTGAGTGGAGAAAGATT
TCTAAACCAAGCAGCATCAAAAGCTTATTTGGTCAAAAATCGCTAAAACT
ATATTATGCCCTTTGCCAGCTAACCACGAAACCTCCCTTTTCGATTTTCC
TTGAAAGAGCATTTCGTCAGTAAGGCATAAATAGACACTAGAAACCACTG
ATAATCTATACTTTTTCATGGTGAGGCTTAGATGGAAGGCCAATTAGATA
GAATGTGTTCGACATCTAGTTTCACACATCAGGTAAGTTGGGAATTTTGT
AATGGTAATAATCAAACagtaatatcaaaataaatttcctgGAACTTTCC
CAGATAGTATTTAAAGTTACACCTTAGTGTGACTTCAGAGTTCAAGTCTT
TCTCGGATATCTACGACCTGACGTTTTACGTACTCGGTCCATGAAAGTAA
CACTTATTTAAAAAGAGGTACATATCACCGCATTATTTATTTTCTCCCAT
AGGTTTCACAAGATCGCAGTAAAGTTgaaaagatgcaaaccaaggctaaa
aaagaccttgaaaaacgaaataaaggtcgtgaaaaactattgaaaaacAT
GGACAAATCATATGATCGAAAAGTCGATAAACAACGTAAATATTTCGGTG
TACCCCTGTCAGCAAACCCCAACAACCCGTACAATTTAGATGGGACCGAT
AAAATGAGTTATTCACAGTTAACCGGGATGACTAACGGACACCATCGAAT
GAATCGAGGAAACCCTGAGGAAATCGCTGAATACGATAGTAACGTAGATA
ACGATTCAATTGATTCATTTCAACGAGTCGAGGAAGAATTCTTAACACGA
AACTCGCAAATTTCCGATGATATCGTTTTCGAACGGCCCGAAAAATCGTC
AATTAGGACGGAACAGACGGACCTTTCCGGAGGTTCTTCATCTACGGAAA
TCTCTATAAAACAACCGGGTATGCTGGCTAGCCTCAATTCCTTACATACT
TCAAGAAACGGGTCCTATACTCATTCGTACAACGGAGGCGGTTATATGAA
CGGTTATTCCCAAACTAACGGCTACCCCCGAAAGCCGTCTTCAACTTCCG
GGCTACTAGAAAACGGAAAGAAGGCTAATAAGGGGTTTGGAAGCTCGCAA
CATTTAGGAGCATCCATGGCGAGCTCAAAGTCGCTCCCGCCTTCTAAGCG
CAATGGTAGACCGGTTGGGTACCGTGAGGTCCATATGGGACCTTTATATA
CTTTTTTACATTCACTCGGTATGGACGAATTCAGAGATGTGTTTTTGCGT
GAGAAAATTGACCTGAGTGCGTGTTTACTCTGTGATGAGAACGATTTGCG
GGAGATCGGGCTCCCGCTCGGCGATCGTAAGAAATTAATGGACGCTATCA
ATAAACGGAATCAGATCATGAAAGAAGCCAGCGAAACGAAAAAAGAGCTG
TTTGATTCTGCAGTGTGA Coding sequence (CDS) from alignment at sc0000027_pilon:2025151..2028218+ >XLOC_039341 ID=XLOC_039341|Name=XLOC_039341|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2706bp|location=Sequence derived from alignment at sc0000027_pilon:2025151..2028218+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCGCAAAATGGATTTTACGATTACTCGGCAGCGGCCAGAGAAAG
CGATTTGGTGACATTGAAACAATGTTCAAAGAAAGAAGCCAATCGACGAG
ATGAAGATGATGGTATCGCAAAATGGATTTTACGATTACTCGGCAGCGGC
CAGAGAAAGCGATTTGGTGACATTGAAACAATGTTCAAAGAAAGAAGCCA
ATCGACGAGATGAAGATGGAATGACGCCAGTCCATTGGGCTTCACTTTAC
GGAAATTTCGAAGCTTTGAAAATACTCATCAATGTTGGGAATGACGCCAG
TCCATTGGGCTTCACTTTACGGAAATTTCGAAGCTTTGAAAATACTCATC
AATGTTGGTGGGAGTCCTGACAAACAAAACAACGAAGGAGCGTCATCACT
CCATTTAGCAGCAGGTAATGGTCATTTACCTTGTCTGGTATACTTGACCA
ACTTTGGTGGAAATGTTCACGCCTTAAATGACAACGGTGGTTCACCTATG
CACGAGGCTGCTATGAAAGGCCAATTAGAGTGTGTTCGACATCTAGAAGC
TATAGTTACACATCAGTGGGAGTCCTGACAAACAAAACAACGAAGGAGCG
TCATCACTCCATTTAGCAGCAGGTAATGGTCATTTACCTTGTCTGGTATA
CTTGACCAACTTTGGTGGAAATGTTCACGCCTTAAATGACAACGGTGGTT
CACCTATGCACGAGGCTGCTATGAAAGGCCAATTAGAGTGTGTTCGACAT
CTAGAAGCTATAGTTACACATCAGGTTTCACAAGATCGCAGTAAAGTTga
aaagatgcaaaccaaggctaaaaaagaccttgaaaaacgaaataaaggtc
gtgaaaaactattgaaaaacATGGACAAATCATATGATCGAAAAGTCGAT
AAACAACGTAAATATTTCGGTGTACCCCTGTCAGCAAACCCCAACAACCC
GTACAATTTAGATGGGACCGATAAAATGAGTTATTCACAGTTAACCGGGA
TGACTAACGGACACCATCGAATGAATCGAGGAAACCCTGAGGAAATCGCT
GAATACGATAGTAACGTAGATAACGATTCAATTGATTCATTTCAACGAGT
CGAGGAAGAATTCTTAACACGAAACTCGCAAATTTCCGATGATATCGTTT
TCGAACGGCCCGAAAAATCGTCAATTAGGACGGAACAGACGGACCTTTCC
GGAGGTTCTTCATCTACGGAAATCTCTATAAAACAACCGGGTATGCTGGC
TAGCCTCAATTCCTTACATACTTCAAGAAACGGGTCCTATACTCATTCGT
ACAACGGAGGCGGTTATATGAACGGTTATTCCCAAACTAACGGCTACCCC
CGAAAGCCGTCTTCAACTTCCGGGCTACTAGAAAACGGAAAGAAGGCTAA
TAAGGGGTTTGGAAGCTCGCAACATTTAGGAGCATCCATGGCGAGCTCAA
AGTCGCTCCCGCCTTCTAAGCGCAATGGTAGACCGGTTGGGTACCGTGAG
GTCCATATGGGACCTTTATATACTTTTTTACATTCACTCGGTATGGACGA
ATTCAGAGATGTGTTTTTGCGTGAGAAAATTGACCTGAGTGCGTGTTTAC
TCTGTGATGAGAACGATTTGCGGGAGATCGGGCTCCCGCTCGGCGATCGT
AAGAAATTAATGGACGCTATCAATAAACGGAATCAGATCATGAAAGAAGC
CAGCGAAACGAAAAAAGAGCTGTTTGATTCTGCAGTGTGAGTTTCACAAG
ATCGCAGTAAAGTTgaaaagatgcaaaccaaggctaaaaaagaccttgaa
aaacgaaataaaggtcgtgaaaaactattgaaaaacATGGACAAATCATA
TGATCGAAAAGTCGATAAACAACGTAAATATTTCGGTGTACCCCTGTCAG
CAAACCCCAACAACCCGTACAATTTAGATGGGACCGATAAAATGAGTTAT
TCACAGTTAACCGGGATGACTAACGGACACCATCGAATGAATCGAGGAAA
CCCTGAGGAAATCGCTGAATACGATAGTAACGTAGATAACGATTCAATTG
ATTCATTTCAACGAGTCGAGGAAGAATTCTTAACACGAAACTCGCAAATT
TCCGATGATATCGTTTTCGAACGGCCCGAAAAATCGTCAATTAGGACGGA
ACAGACGGACCTTTCCGGAGGTTCTTCATCTACGGAAATCTCTATAAAAC
AACCGGGTATGCTGGCTAGCCTCAATTCCTTACATACTTCAAGAAACGGG
TCCTATACTCATTCGTACAACGGAGGCGGTTATATGAACGGTTATTCCCA
AACTAACGGCTACCCCCGAAAGCCGTCTTCAACTTCCGGGCTACTAGAAA
ACGGAAAGAAGGCTAATAAGGGGTTTGGAAGCTCGCAACATTTAGGAGCA
TCCATGGCGAGCTCAAAGTCGCTCCCGCCTTCTAAGCGCAATGGTAGACC
GGTTGGGTACCGTGAGGTCCATATGGGACCTTTATATACTTTTTTACATT
CACTCGGTATGGACGAATTCAGAGATGTGTTTTTGCGTGAGAAAATTGAC
CTGAGTGCGTGTTTACTCTGTGATGAGAACGATTTGCGGGAGATCGGGCT
CCCGCTCGGCGATCGTAAGAAATTAATGGACGCTATCAATAAACGGAATC
AGATCATGAAAGAAGCCAGCGAAACGAAAAAAGAGCTGTTTGATTCTGCA
GTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000027_pilon | genome | sc0000027_pilon:2025151..2028218 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 388-1353:2103 |
| Aaloc | 181-387:1427 |
| Aaloc | 112-177:534 |
| Aaloc | 1-108:1 |
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