XLOC_039296 (mRNA) -

Overview
NameXLOC_039296
Unique NameXLOC_039296
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000260_pilon:56381..57152+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039296 ID=XLOC_039296|Name=XLOC_039296|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=772bp|location=Sequence derived from alignment at sc0000260_pilon:56381..57152+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAGCAATAACACCTTCAACATTTGTGACCAATTTCAAATCCGTATT CGCTGGAAATGGAAACGCACAATCTAATCCATCAATTAGACAAACAGAAT ACGTGAACAAGAAAATCATTtcagagactttattacaagaGTTAGAATTC CAAATCACTGAAAACGAAAATTATGctaaagatttagaaaaacagaaaaa tagcTCATCTGGCCGTCCTGATTATACATGGCTGATGGATAAACCGAAAA CATATCGACTGCCTCCGCTTACAAGATTGGAATTAGAGGAAATGTCAAAA TATCTACACGTGGATGATGTGAGTTTGATTATACAGGAGTTTCGAGACGC TATAGACTACGATGTAGCTGTAGATAAATTGGCAAATTACCTGAAGTTTA TCATGAATCATCATATTCACGAAAAGCGGAAGACTAAAAACAGCGACGAA TATCAACGCTTTACAATTAACAACAACAAATTCGGCACCCGTCCGAAGTC AATCAAGTGCCATTatgaaacaaatcaaaatgaacACCTTATCACGCCCT TCGTCGGCGCCCTTAACAAACACGTGGAAAAAACGGGTTAGGGTGCACCC TATGAACGCCCGCAAAATATCAAATGATAAGTCAGATGCTGTTTATATTG ACTTATCAGGACATATACAAAATGATaattttacagacccgaataacaat tttacagaccagaatgatGGTGATTCGATTGAGTATACAGAAGTTGTTGA TATAGCTAATTCGTATGTTTAA

Coding sequence (CDS) from alignment at sc0000260_pilon:56381..57152+

>XLOC_039296 ID=XLOC_039296|Name=XLOC_039296|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1544bp|location=Sequence derived from alignment at sc0000260_pilon:56381..57152+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAGCAATAACACCTTCAACATTTGTGACCAATTTCAAATCCGTATT
CGCTGGAAATGGAAACGCACAATCTAATCCATCAATTAGACAAACAGAAT
ACGTGAACAAGAAAATCATTtcagagactttattacaagaGTTAGAATTC
CAAATCACTGAAAACGAAAATTATGctaaagatttagaaaaacagaaaaa
tagcTCATCTGGCCGTCCTGATTATACATGGCTGATGGATAAACCGAAAA
CATATCGACTGCCTCCGCTTACAAGATTGGAATTAGAGGAAATGTCAAAA
TATCTACACGTGGATGATGTGAGTTTGATTATACAGGAGTTTCGAGACGC
TATAGACTACGATGTAGCTGTAGATAAATTGGCAAATTACCTGAAGTTTA
TCATGAATCATCATATTCACGAAAAGCGGAAGACTAAAAACAGCGACGAA
TATCAACGCTTTACAATTAACAACAACAAATTCGGCACCCGTCCGAAGTC
AATCAAGTGCCATTatgaaacaaatcaaaatgaacACCTTATCACGCCCT
TCGTCGGCGCCCTTAACAAACACGTGGAAAAAACGGGTTAGGGTGCACCC
TATGAACGCCCGCAAAATATCAAATGATAAGTCAGATGCTGTTTATATTG
ACTTATCAGGACATATACAAAATGATaattttacagacccgaataacaat
tttacagaccagaatgatGGTGATTCGATTGAGTATACAGAAGTTGTTGA
TATAGCTAATTCGTATGTTTAAATGCCAGCAATAACACCTTCAACATTTG
TGACCAATTTCAAATCCGTATTCGCTGGAAATGGAAACGCACAATCTAAT
CCATCAATTAGACAAACAGAATACGTGAACAAGAAAATCATTtcagagac
tttattacaagaGTTAGAATTCCAAATCACTGAAAACGAAAATTATGcta
aagatttagaaaaacagaaaaatagcTCATCTGGCCGTCCTGATTATACA
TGGCTGATGGATAAACCGAAAACATATCGACTGCCTCCGCTTACAAGATT
GGAATTAGAGGAAATGTCAAAATATCTACACGTGGATGATGTGAGTTTGA
TTATACAGGAGTTTCGAGACGCTATAGACTACGATGTAGCTGTAGATAAA
TTGGCAAATTACCTGAAGTTTATCATGAATCATCATATTCACGAAAAGCG
GAAGACTAAAAACAGCGACGAATATCAACGCTTTACAATTAACAACAACA
AATTCGGCACCCGTCCGAAGTCAATCAAGTGCCATTatgaaacaaatcaa
aatgaacACCTTATCACGCCCTTCGTCGGCGCCCTTAACAAACACGTGGA
AAAAACGGGTTAGGGTGCACCCTATGAACGCCCGCAAAATATCAAATGAT
AAGTCAGATGCTGTTTATATTGACTTATCAGGACATATACAAAATGATaa
ttttacagacccgaataacaattttacagaccagaatgatGGTGATTCGA
TTGAGTATACAGAAGTTGTTGATATAGCTAATTCGTATGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039296XLOC_039296-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000260_pilongenomesc0000260_pilon:56381..57152 +
Properties
Property NameValue
Aaloc460-771:461
Aaloc1-459:1