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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000260_pilon:195509..198280+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039293 ID=XLOC_039293|Name=XLOC_039293|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2772bp|location=Sequence derived from alignment at sc0000260_pilon:195509..198280+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTCTGCTTGTAACAGCTGGTGAAGATGTCCGTCTATGGAATGTTCC
AGACCTCAGTTTACAAAAAGTACGGAATGGAACTAATGCCAATGTACTTC
ACTGTATATGCAGTCCCAATGGTAAAAGTCATTGTTTTCATTATTGATTT
CTATTGAtctattgaaatttttcttttctgattaattaaaaaacagacat
tttcttgattttattttttatcaccAGGGATATATTGATAAAAACTGACA
AACTGAAATCTTCTATGTTTGTGTTTTTATGGTTTAAGTatcttttctta
aatttttgctcTAAAGTCATTCTTACGCAGTTTTCATTGCCATTTATCTG
GCTTTCGCTTGAATTTCTGTCTTTTTGTTGTAGGTCAGTATGTGGCTTAC
ACATATGAGGAGGTTGGGATTCGTATCAGCAGTATGTCTGATGATGACCT
ACCTGTTATTGAGATTCCCACACCGGTAAGTCTTCTaggacattttttga
aaatgaaaggattttttttgagaaaccTGTTTACAGTTTCAGAGATGATT
CAATCAGGATGCTTTCTTTCGCCACTGTTGTAactgaaagttttttactg
aTCTTTAACTTTTTGACTGGATTGGGTTCCTATGATAATTGAAGTGTGCC
CAGCTTTTGAGCTGATGTTTCCAGCTTTTGATCTTAATAGTACACCATGT
TGTTTTCATTTCTGGTTGTCGACCACAtgatttaaatgttttgaaactGA
AATGTTCGAAAATAAAACGTACATAGATAGAAATCAACATTACAGGGAAC
TTGACTTTATTACTAGGCACACTCTCACAGGAAATCTTGTGTTGAGGcag
tttttgttaaatttttttattttaaaacataCCTGTTAATCCTAAGACTG
GCTGGTTGAGGGTTGATTCATATTCAATCTACTGGACAGCTTTAAAACAA
GAACTAAATTCAATAATTTTAGATTCAACAATCAAGTGTAGCATTCAACG
GGCATTCCAGATACTTGGTCAGTGGTGGCTTGGATTGTGTCATCAATATT
TGGGACATCAAATCAAGAACTGTCAAAAGAACCTACAAGGTTTTTACACA
CTTTTTATGCTAAAAAGTCTTAAAGTGCTCTAATGATCAGACTTTAATTT
GCAATTTGTTTCTCACAAATCATTGAATTCATCGaggtttaaaactttta
aaacttatCTCCACTCCCTATTCTAATGGTCAAAATAACAGTTCTGTAGT
ATTAAAAGATTAATTCAAATAATCTTTTGAGAGCTTTCTTGCGCTATGTT
GAGTTTGAGATGTAGATTTTTTGGGGGCTCTTAGAATTTTAATGCCTGAT
AATTTCTACAGGACTAAAAGTATACTAggattttgaaattatgattACCT
AAGCCCATGCCAATCATGTTAGTATACTCTAAACGTtcaagattaaaaat
aaaaagtaagcaAATGATAGGAATTACATTAGAATATGTCCTTTAATTTA
GGAAACTgatgatattgaaaaaaagatagAGGTTCTACTTATTTTTCCAT
CTCCATAGAACCATTTCAATCCAGTAACGTATTGTCAATTCAACTACAAC
GACAACATCATTGCATCGTCATCTGATCACGGTGACATCATTTTGACCAA
CGTCTCCAGTGGTGAATGCTCAGATCCGCTCACTGGCAATGATGATTCGC
AGGTAATGGTCTGGTACACAATTTATATATCcttcttttttgttattttt
ccacTATGCTCGACACAATAAAATGAGTATGAAGATATAGCCAGTAGTAA
ACCTGCTTCAAACTTCAAAATCCTAATTTAGTAGTaggatttttgcaatt
ttcgtcCTATTTCCTGACCTTTTGGAATTGTTTATCTTGAAATTGGTCCT
TTTTTCACAGGCTGTTCGCTGTCTTGGTTATTCCCACTTTTCAAGATCAC
TCTTGGCTTCAGTCAGTGACAGTGGTGCTGTCTGTTTATGGGACACTAAA
GAACAGAAAATGTTGAAGAAATTCACAGACCATAAAGCTCCTGGCACATG
CTTGTCATTCTCACCGCTCAATGATATGTTATTGTGTTCATCTGGACTTG
ACAAGCGAATCATATTCTATGATGTGATTGGAAAAAAGTAAGAATCTCTT
TTTGTCGTAGTGAGTAGGCTTCTGTTTCGATAGCTATCTCTTGGAAAGCA
ATTACTGAGTAATTATAGGcatatttataatattttccaATGCTTCGTGA
AGACCTACTAGGGAATGAGCTTGCTATTGTCCTGACAAGTAATTCAAAGT
TCGTCATTCCTGGCAGTAAACAGAGGCTTGCTTTCTCACAGTGCACTCTG
TGCGCATTATCTGTTTGATAAATAAAAGAATTCCCGTACGTAAACCTCTg
agatgaagtatgatttacaaatagcaacacttctctcattgTCTTACCTC
TCCCACAcccgcactccatcgcagcggtcggtttgaaaaatctcaaatca
gaaaagacaaagacaacagaccctctactgcattgaattttttgaaatca
gccgtagatatcgggtctatGTACAGATTTACTTTCATTTCAAGCTGCTA
TTAAACTTGGCAATCTCTTGACCcctgttattaatttttaaaaacttctc
ATCTCAAATTTGTACAGATTTTAGCAATGGCTTTTTTCTTGTATTCATTT
CACAGGACAGTAAAGACGATCAATACAGAAGGGCCGATCACTTCTTGTGA
CTTTTTCAGTGATGGGTGCACT Coding sequence (CDS) from alignment at sc0000260_pilon:195509..198280+ >XLOC_039293 ID=XLOC_039293|Name=XLOC_039293|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1536bp|location=Sequence derived from alignment at sc0000260_pilon:195509..198280+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTCTGCTTGTAACAGCTGGTGAAGATGTCCGTCTATGGAATGTTCC
AGACCTCAGTTTACAAAAAGTACGGAATGGAACTAATGCCAATGTACTTC
ACTGTATATGCAGTCCCAATGATGAGTCTGCTTGTAACAGCTGGTGAAGA
TGTCCGTCTATGGAATGTTCCAGACCTCAGTTTACAAAAAGTACGGAATG
GAACTAATGCCAATGTACTTCACTGTATATGCAGTCCCAATGGTCAGTAT
GTGGCTTACACATATGAGGAGGTTGGGATTCGTATCAGCAGTATGTCTGA
TGATGACCTACCTGTTATTGAGATTCCCACACCGGTCAGTATGTGGCTTA
CACATATGAGGAGGTTGGGATTCGTATCAGCAGTATGTCTGATGATGACC
TACCTGTTATTGAGATTCCCACACCGATTCAACAATCAAGTGTAGCATTC
AACGGGCATTCCAGATACTTGGTCAGTGGTGGCTTGGATTGTGTCATCAA
TATTTGGGACATCAAATCAAGAACTGTCAAAAGAACCTACAAGATTCAAC
AATCAAGTGTAGCATTCAACGGGCATTCCAGATACTTGGTCAGTGGTGGC
TTGGATTGTGTCATCAATATTTGGGACATCAAATCAAGAACTGTCAAAAG
AACCTACAAGAACCATTTCAATCCAGTAACGTATTGTCAATTCAACTACA
ACGACAACATCATTGCATCGTCATCTGATCACGGTGACATCATTTTGACC
AACGTCTCCAGTGGTGAATGCTCAGATCCGCTCACTGGCAATGATGATTC
GCAGAACCATTTCAATCCAGTAACGTATTGTCAATTCAACTACAACGACA
ACATCATTGCATCGTCATCTGATCACGGTGACATCATTTTGACCAACGTC
TCCAGTGGTGAATGCTCAGATCCGCTCACTGGCAATGATGATTCGCAGGC
TGTTCGCTGTCTTGGTTATTCCCACTTTTCAAGATCACTCTTGGCTTCAG
TCAGTGACAGTGGTGCTGTCTGTTTATGGGACACTAAAGAACAGAAAATG
TTGAAGAAATTCACAGACCATAAAGCTCCTGGCACATGCTTGTCATTCTC
ACCGCTCAATGATATGTTATTGTGTTCATCTGGACTTGACAAGCGAATCA
TATTCTATGATGTGATTGGAAAAAAGCTGTTCGCTGTCTTGGTTATTCCC
ACTTTTCAAGATCACTCTTGGCTTCAGTCAGTGACAGTGGTGCTGTCTGT
TTATGGGACACTAAAGAACAGAAAATGTTGAAGAAATTCACAGACCATAA
AGCTCCTGGCACATGCTTGTCATTCTCACCGCTCAATGATATGTTATTGT
GTTCATCTGGACTTGACAAGCGAATCATATTCTATGATGTGATTGGAAAA
AAGACAGTAAAGACGATCAATACAGAAGGGCCGATCACTTCTTGTGACTT
TTTCAGTGATGGGTGCACTGACAGTAAAGACGATCAATACAGAAGGGCCG
ATCACTTCTTGTGACTTTTTCAGTGATGGGTGCACT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000260_pilon | genome | sc0000260_pilon:195509..198280 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 703-768:2707 |
| Aaloc | 475-699:1911 |
| Aaloc | 331-474:1559 |
| Aaloc | 214-330:973 |
| Aaloc | 124-213:386 |
| Aaloc | 1-120:1 |
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