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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:42496..44207- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039291 ID=XLOC_039291|Name=XLOC_039291|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1712bp|location=Sequence derived from alignment at sc0000086_pilon:42496..44207- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGGATTTCATGAGAATTTTGTTTTGTTTGGGATTTGTTGTAGTTGC
TGTCATTGCAGAAGCTGAGACTCAGGTACATAATTTTCCGCATCATTTCC
AAACTTACCATCATTTTGTATATAAGATTTCCATTTCTGCACTTAGACTC
CTTTGCCACTTTTCTATGGGAAGACTCCGGGTAGCTGAAAAATAATGAGC
TTTATAAAGTTAAGCGCTATTAGTATCATTCACAAGGGAACTAAGGGGCT
GGGTTCGAGTTTGTGAATCCGTTAGTGGATGCAAGTAACCTCGTAGGGTT
TTTGAGATAGTTCACAGATGAATTTCCGTTATGTCGACATACTCTTTACC
GGAACTTTTTACTGGTTTTACTTTAGGGCTATGATAGTCAGCAGATCTTC
TAATATGGAAGGTTAAGCTGACGCAAATTTTTGACCTCTTTAAAGATTTA
TACTCCTTAATAACGGGCTAAGTCATTAAATAATTTCGATTAACGTACAA
CTTTTTTTCACGCCAAAGGATGACAACTTAGCCAAGCGGGTATCCCATCA
AACTCATATCCCTGGGGACAAGTCACCAGGACGTAAATTTATTCTTCACT
TGCGTCCCCATGGCGATGAACAAACAAAACAACGAAAGATGCTGCCCCTA
AAGCGAGAAGATACTGCTGTTGATGATCTTTTTGCATCACGGTTTGGTAA
GGAGGATGAGGATGCTGCCGAGTCTACGTGGAGTGCCTGGAGAATGGGAC
GGGAAGCAGATACTGTGGACACCACCAAGAGGGTAAAGGATGCTGAGTCA
GCATGGAGTGTTTGGAGGATGGGACGGGAAACGGATGGCACTACCACTGT
AAAGGACGCCACCACGAGGGAGCGAGATGCCTCTATCCCCAGCCATCCAA
GATATCAAGTATTTAGGTCAGGTCGAGAAGCCGAAAAGTCGCTTCCAATG
TCAAGAGCATTTGGTGGAAAAAGGGATTCACCCGGCGATGCTCCTATTCC
TTATTATTACTCATTCAACAACGAAGGAAAAGATTTTTCGTGGAACATCT
TTGGTAGAAAGAGAGCAGCTGAGTCCGATCTTCCAATGTCCAGATTTGTC
GATGGTCGAAAGAGGGATTTACCCATGGGAAGAACGTTTTCCAAACGGAA
ATCCAACCGCATGTTTTCTCGTGCCGACGTTCCGTTTTTCGTCAAGCGAG
GTTCAAACCTACCTATGAACAGAATGTTTTCTCGAAGTGCTGTTCCATAC
TTTGGAGAAGGAAAGAGAGAATCGAATCATTTGCCAATGGGTATTTTTTC
AAGAGAAAAAACCAACGCTGATGTTCCGTTTTATGTAAAACGTGCTTCAA
GCCTTCCTCTCGGTCATATGTTCTCCAAAAGAGCCAATTTCCTCAACAAT
CGCCTACCAATGCAACTTGGATTTAAACGAGCCTCAAATCTACCAATGAC
CAGAATGTTTTCCAAGAGGGCGAGTCTACCAATGCTACTTGGAGTAGTCA
AAAAGGAGCATGGTGGATTTGCACGAGCACCTGAATACAACTGGGGTCCA
GCTTCCTTGAAATATCACCGCCGTAGCCTCCTTCCAATGATAATGCACGA
AAGAAAAAGACGCTTCAATGGATTCAGACCAGTCGTAAGTGGAATTATCA
ATAATGACCGAAACCGTAAATTGAAAAACAATGTCAATGACTTTCATGTT
AAAAAACTTTGA Coding sequence (CDS) from alignment at sc0000086_pilon:42496..44207- >XLOC_039291 ID=XLOC_039291|Name=XLOC_039291|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000086_pilon:42496..44207- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGGATTTCATGAGAATTTTGTTTTGTTTGGGATTTGTTGTAGTTGC
TGTCATTGCAGAAGCTGAGACTCAGATGTTGGATTTCATGAGAATTTTGT
TTTGTTTGGGATTTGTTGTAGTTGCTGTCATTGCAGAAGCTGAGACTCAG
GATGACAACTTAGCCAAGCGGGTATCCCATCAAACTCATATCCCTGGGGA
CAAGTCACCAGGACGTAAATTTATTCTTCACTTGCGTCCCCATGGCGATG
AACAAACAAAACAACGAAAGATGCTGCCCCTAAAGCGAGAAGATACTGCT
GTTGATGATCTTTTTGCATCACGGTTTGGTAAGGAGGATGAGGATGCTGC
CGAGTCTACGTGGAGTGCCTGGAGAATGGGACGGGAAGCAGATACTGTGG
ACACCACCAAGAGGGTAAAGGATGCTGAGTCAGCATGGAGTGTTTGGAGG
ATGGGACGGGAAACGGATGGCACTACCACTGTAAAGGACGCCACCACGAG
GGAGCGAGATGCCTCTATCCCCAGCCATCCAAGATATCAAGTATTTAGGT
CAGGTCGAGAAGCCGAAAAGTCGCTTCCAATGTCAAGAGCATTTGGTGGA
AAAAGGGATTCACCCGGCGATGCTCCTATTCCTTATTATTACTCATTCAA
CAACGAAGGAAAAGATTTTTCGTGGAACATCTTTGGTAGAAAGAGAGCAG
CTGAGTCCGATCTTCCAATGTCCAGATTTGTCGATGGTCGAAAGAGGGAT
TTACCCATGGGAAGAACGTTTTCCAAACGGAAATCCAACCGCATGTTTTC
TCGTGCCGACGTTCCGTTTTTCGTCAAGCGAGGTTCAAACCTACCTATGA
ACAGAATGTTTTCTCGAAGTGCTGTTCCATACTTTGGAGAAGGAAAGAGA
GAATCGAATCATTTGCCAATGGGTATTTTTTCAAGAGAAAAAACCAACGC
TGATGTTCCGTTTTATGTAAAACGTGCTTCAAGCCTTCCTCTCGGTCATA
TGTTCTCCAAAAGAGCCAATTTCCTCAACAATCGCCTACCAATGCAACTT
GGATTTAAACGAGCCTCAAATCTACCAATGACCAGAATGTTTTCCAAGAG
GGCGAGTCTACCAATGCTACTTGGAGTAGTCAAAAAGGAGCATGGTGGAT
TTGCACGAGCACCTGAATACAACTGGGGTCCAGCTTCCTTGAAATATCAC
CGCCGTAGCCTCCTTCCAATGATAATGCACGAAAGAAAAAGACGCTTCAA
TGGATTCAGACCAGTCGTAAGTGGAATTATCAATAATGACCGAAACCGTA
AATTGAAAAACAATGTCAATGACTTTCATGTTAAAAAACTTTGAGATGAC
AACTTAGCCAAGCGGGTATCCCATCAAACTCATATCCCTGGGGACAAGTC
ACCAGGACGTAAATTTATTCTTCACTTGCGTCCCCATGGCGATGAACAAA
CAAAACAACGAAAGATGCTGCCCCTAAAGCGAGAAGATACTGCTGTTGAT
GATCTTTTTGCATCACGGTTTGGTAAGGAGGATGAGGATGCTGCCGAGTC
TACGTGGAGTGCCTGGAGAATGGGACGGGAAGCAGATACTGTGGACACCA
CCAAGAGGGTAAAGGATGCTGAGTCAGCATGGAGTGTTTGGAGGATGGGA
CGGGAAACGGATGGCACTACCACTGTAAAGGACGCCACCACGAGGGAGCG
AGATGCCTCTATCCCCAGCCATCCAAGATATCAAGTATTTAGGTCAGGTC
GAGAAGCCGAAAAGTCGCTTCCAATGTCAAGAGCATTTGGTGGAAAAAGG
GATTCACCCGGCGATGCTCCTATTCCTTATTATTACTCATTCAACAACGA
AGGAAAAGATTTTTCGTGGAACATCTTTGGTAGAAAGAGAGCAGCTGAGT
CCGATCTTCCAATGTCCAGATTTGTCGATGGTCGAAAGAGGGATTTACCC
ATGGGAAGAACGTTTTCCAAACGGAAATCCAACCGCATGTTTTCTCGTGC
CGACGTTCCGTTTTTCGTCAAGCGAGGTTCAAACCTACCTATGAACAGAA
TGTTTTCTCGAAGTGCTGTTCCATACTTTGGAGAAGGAAAGAGAGAATCG
AATCATTTGCCAATGGGTATTTTTTCAAGAGAAAAAACCAACGCTGATGT
TCCGTTTTATGTAAAACGTGCTTCAAGCCTTCCTCTCGGTCATATGTTCT
CCAAAAGAGCCAATTTCCTCAACAATCGCCTACCAATGCAACTTGGATTT
AAACGAGCCTCAAATCTACCAATGACCAGAATGTTTTCCAAGAGGGCGAG
TCTACCAATGCTACTTGGAGTAGTCAAAAAGGAGCATGGTGGATTTGCAC
GAGCACCTGAATACAACTGGGGTCCAGCTTCCTTGAAATATCACCGCCGT
AGCCTCCTTCCAATGATAATGCACGAAAGAAAAAGACGCTTCAATGGATT
CAGACCAGTCGTAAGTGGAATTATCAATAATGACCGAAACCGTAAATTGA
AAAACAATGTCAATGACTTTCATGTTAAAAAACTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:42496..44207 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 238-1278:1042 |
| Aaloc | 76-228:1195 |
| Aaloc | 1-75:1713 |
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