|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000027_pilon:568565..571783+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039253 ID=XLOC_039253|Name=XLOC_039253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3219bp|location=Sequence derived from alignment at sc0000027_pilon:568565..571783+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACTTTGTTTAAGTCATCACCAGAAGGCCTTCATTCATTAGACCA
AGGTgagttcttttttcttttaattaagATTTATGAAGAAtgaagtaatg
atttttttttgttcaatgcTGACAGTTTCATGTGTTATGTACACACAATT
ATctacataaagattaagaaacggtGTATTTCTTCTCAATACACACAGTT
ATCAGttgaaataaaagttttggtcaaGCACTCtttttttAGACGAACAA
AGAGTGTCAGATAGGGAAACTTATTTGGGTCTCCATTTCGGCCTGTTTTG
GCAGGTGACTGTAAAGTTTTGTGGGTGCACTGCACTGATCTCTGACTACT
TAGCTGcatttattattatttctaactgtttctagaTCTGCTGCTGGCTG
CAGAGATTGGAAAGACATTACTGGAGAAGAATCGTGAATTGGAGATACTC
TTGAAATCAACACAAGATTATGCAGATGAAAAAGCAGCACAGGCTGATGT
AAGATAGACGactttattcattcattcattcattcatattGAGAGGGTAA
AATGGGTTATACTTAAGGTGTCTACATTGCTAGAAAACACatctgcacgt
ttttttataagaacaaactttataagaacataaggcttcgatggccaaaa
tgttaagaaccagttaagaacattttaaggcttcgggGACTataaacagc
caatttcttaggaaaatagattaaaaatggtcaaaaaatggtgagagaac
atttttaggcttaaaaccaaaaagttatgaacatcccaaagcttcaaaaa
ttttgtatgttcttataaaaaaaacttgtaaatcaAGGATTTTCTTTCTA
ATAAATAAAGAATATAAGGTATTTCAAAGCTACGAACTTAAGGATTGTTA
TTGGAGGGTCAAGTGCCTCTGCTCTCTCTGGTTGCTACGAGCCTGGAATT
CCTGCAAGTCATGGAATTTAGATATTTGGTTTAAATGccttttttgttta
ctttttcagATGTTTTATTGACTCTGAGATTTGTATTGATCTTTAtagtc
actgacctttatatatccctggataTTGGCTTgggctatatccaccatct
ttgatcaaagttttttttgaaatggtacatgtaaagaagccattgcagtg
ttaaaaattaacttctaacggcgctacatcatcaaaagttttcgagggaa
agtagatctagcgctctcgatgcatttacaccgcgaTTGAGCAGTGttgc
cattagggtaccacttttagaaaaactccgatcaaagattttgcttggcc
gggaaaCTTGGTCCATGGTATATAAAAGTCAGTGTTTACTGTATAGCTCA
TTATCAAGTTACATATTGATCTTTTTTACTTCTCAGTTTTACATGAAACA
AGTGGAAATTCTTCGTGAATCGAACGATTCTTGTGCGCATGCGTGTGAAG
TGTTGGAATCCACCAACCAAAATCTACATGACAAATATGACCAAGTCAAT
GCTGATTACAAAATACTACAAGGTTtactttttaccatttttttactctt
atgcagtaataaaaattaagagtgtttcaaTGtATGCAAATGGTTAAATC
TTATTCGTATTTTTACCATTGAGAGAATTGGGAAGGAAGGAGCAGCATAG
CGACAGGGTGCCTCCCGAGCGGCCGATTTTTGGGGGTGGGCGCTGAAAGA
CAAGGGGAGGAAAAGGGTATTGCTAGTTACTAATTTCAGCGCCCCTTTGC
TATTTTACACCGTAGAATTAgcagttttttgccaaaatgagAAGAACTAC
CCCAAACTTTTCGTGCTCTCTTCGCTCATGTAAGTTGTACAAACATGGTT
TACTTTTAataaggggcgccaaaatccCTACTTTCAAAATTACCTGCCCA
GTTTTCCCCAATTTTGGTCGACTCACCACGCTACTGGAAGGAAGTACTTC
AGTGCGAAAATTTGTTGATTAATAAGCCAACACAAAGGTTATGATCTCTT
CCATTATTAACTAAAATacagcctgggatacacggggacgaggttgtggC
TTTTGGAGGGATCGGAATGATTTAATATTCTTACTTACTtaattcgttac
ctttgagagaGTTAGGAAGTTCAACAGTTGATTAATAAGtatagaattat
tttttatctcGCTACAGGTAAAAACACTCGACTATGGGAATTGATTAACA
ATTTGGAGAAGAAAAACGAAGATCTGAATGCAGAAGTCACTTCACTGCAA
CACGAAATTGATGAATACGaactgaaaattgaagaattcgAACAACATAA
AGCCAAagttacaaaacaacAaaaagataaGAGTGTTGTGATCGCCAATG
GCCGATTCAATGATTTTATTACAAACGAAGATGCGGATATACATAGTAAC
GGATCCATAGTTACCGAGGAGCATATACAACAATTCCAAACTGAGATTCT
GAACTTGAAAAACGATATCACGGAATTAAAAGTACAAGTTCGTGTTGAGA
AATGGCAGAAAGAGGAGATTGATTCCCAAATGCAGGACGTGATTCAAGAG
AACCAATTATTACATCAAAAGATTGCTGAACTTAATAAAGAGATTTTAGA
ATGGGAATCGTTCGCGCAGAAAGAGGAATGCTATCGAAGAATTGCTGAGG
CGTTTGCTATTAAACATAATATTGAAATTGAAGAGAGTTTCGTGCATACG
GCACACCAGGTGCATAGCAACGGTGGTCTGAGTGTCAGCCCAACAACACT
TTCAAAAGCAAGATCGTGCGAATATTTAAACAGAGTACCTACTAAAGACA
TGTCTACTAAAATTATTCAAGGGTCAAATATACGTCATTTGGTTCAGAAT
TCTGGTGCGCCAAGTAATTCATTGCTATCAGAGCTGGACAAGGAGTATGA
CGCTCTCGTCAAACGTTACGAAGCATtattagaaaaatgtaaacaagacG
GGAAGTTCACCGAAAATCCTGAGCGTACGCGTAAAGTACAGCGTGCCATA
CAGACCTTATCGTTAGATTTCTCAAAGCTTACAACTCCTATACAATCGCC
TATTAAACCGTCAAAAAGTTTGGCCGGCGATGGATGCTCTCATGCGGGCA
CTGCAACTTCAACGGATAGTTTACATTCTAATGTTGGCGATTATAGGATG
TTGTTTTCACAGATTTTCGCTAAACTGAAAGAAGCTCCGAGTTCTAATAG
TAATAATAGTAGCGAAGAT Coding sequence (CDS) from alignment at sc0000027_pilon:568565..571783+ >XLOC_039253 ID=XLOC_039253|Name=XLOC_039253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2706bp|location=Sequence derived from alignment at sc0000027_pilon:568565..571783+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACTTTGTTTAAGTCATCACCAGAAGGCCTTCATTCATTAGACCA
AGATGGAGACTTTGTTTAAGTCATCACCAGAAGGCCTTCATTCATTAGAC
CAAGaTCTGCTGCTGGCTGCAGAGATTGGAAAGACATTACTGGAGAAGAA
TCGTGAATTGGAGATACTCTTGAAATCAACACAAGATTATGCAGATGAAA
AAGCAGCACAGGCTGATaTCTGCTGCTGGCTGCAGAGATTGGAAAGACAT
TACTGGAGAAGAATCGTGAATTGGAGATACTCTTGAAATCAACACAAGAT
TATGCAGATGAAAAAGCAGCACAGGCTGATTTTTACATGAAACAAGTGGA
AATTCTTCGTGAATCGAACGATTCTTGTGCGCATGCGTGTGAAGTGTTGG
AATCCACCAACCAAAATCTACATGACAAATATGACCAAGTCAATGCTGAT
TACAAAATACTACAAGTTTTACATGAAACAAGTGGAAATTCTTCGTGAAT
CGAACGATTCTTGTGCGCATGCGTGTGAAGTGTTGGAATCCACCAACCAA
AATCTACATGACAAATATGACCAAGTCAATGCTGATTACAAAATACTACA
AGGTAAAAACACTCGACTATGGGAATTGATTAACAATTTGGAGAAGAAAA
ACGAAGATCTGAATGCAGAAGTCACTTCACTGCAACACGAAATTGATGAA
TACGaactgaaaattgaagaattcgAACAACATAAAGCCAAagttacaaa
acaacAaaaagataaGAGTGTTGTGATCGCCAATGGCCGATTCAATGATT
TTATTACAAACGAAGATGCGGATATACATAGTAACGGATCCATAGTTACC
GAGGAGCATATACAACAATTCCAAACTGAGATTCTGAACTTGAAAAACGA
TATCACGGAATTAAAAGTACAAGTTCGTGTTGAGAAATGGCAGAAAGAGG
AGATTGATTCCCAAATGCAGGACGTGATTCAAGAGAACCAATTATTACAT
CAAAAGATTGCTGAACTTAATAAAGAGATTTTAGAATGGGAATCGTTCGC
GCAGAAAGAGGAATGCTATCGAAGAATTGCTGAGGCGTTTGCTATTAAAC
ATAATATTGAAATTGAAGAGAGTTTCGTGCATACGGCACACCAGGTGCAT
AGCAACGGTGGTCTGAGTGTCAGCCCAACAACACTTTCAAAAGCAAGATC
GTGCGAATATTTAAACAGAGTACCTACTAAAGACATGTCTACTAAAATTA
TTCAAGGGTCAAATATACGTCATTTGGTTCAGAATTCTGGTGCGCCAAGT
AATTCATTGCTATCAGAGCTGGACAAGGAGTATGACGCTCTCGTCAAACG
TTACGAAGCATtattagaaaaatgtaaacaagacGGGAAGTTCACCGAAA
ATCCTGAGCGTACGCGTAAAGTACAGCGTGCCATACAGACCTTATCGTTA
GATTTCTCAAAGCTTACAACTCCTATACAATCGCCTATTAAACCGTCAAA
AAGTTTGGCCGGCGATGGATGCTCTCATGCGGGCACTGCAACTTCAACGG
ATAGTTTACATTCTAATGTTGGCGATTATAGGATGTTGTTTTCACAGATT
TTCGCTAAACTGAAAGAAGCTCCGAGTTCTAATAGTAATAATAGTAGCGA
AGATGTAAAAACACTCGACTATGGGAATTGATTAACAATTTGGAGAAGAA
AAACGAAGATCTGAATGCAGAAGTCACTTCACTGCAACACGAAATTGATG
AATACGaactgaaaattgaagaattcgAACAACATAAAGCCAAagttaca
aaacaacAaaaagataaGAGTGTTGTGATCGCCAATGGCCGATTCAATGA
TTTTATTACAAACGAAGATGCGGATATACATAGTAACGGATCCATAGTTA
CCGAGGAGCATATACAACAATTCCAAACTGAGATTCTGAACTTGAAAAAC
GATATCACGGAATTAAAAGTACAAGTTCGTGTTGAGAAATGGCAGAAAGA
GGAGATTGATTCCCAAATGCAGGACGTGATTCAAGAGAACCAATTATTAC
ATCAAAAGATTGCTGAACTTAATAAAGAGATTTTAGAATGGGAATCGTTC
GCGCAGAAAGAGGAATGCTATCGAAGAATTGCTGAGGCGTTTGCTATTAA
ACATAATATTGAAATTGAAGAGAGTTTCGTGCATACGGCACACCAGGTGC
ATAGCAACGGTGGTCTGAGTGTCAGCCCAACAACACTTTCAAAAGCAAGA
TCGTGCGAATATTTAAACAGAGTACCTACTAAAGACATGTCTACTAAAAT
TATTCAAGGGTCAAATATACGTCATTTGGTTCAGAATTCTGGTGCGCCAA
GTAATTCATTGCTATCAGAGCTGGACAAGGAGTATGACGCTCTCGTCAAA
CGTTACGAAGCATtattagaaaaatgtaaacaagacGGGAAGTTCACCGA
AAATCCTGAGCGTACGCGTAAAGTACAGCGTGCCATACAGACCTTATCGT
TAGATTTCTCAAAGCTTACAACTCCTATACAATCGCCTATTAAACCGTCA
AAAAGTTTGGCCGGCGATGGATGCTCTCATGCGGGCACTGCAACTTCAAC
GGATAGTTTACATTCTAATGTTGGCGATTATAGGATGTTGTTTTCACAGA
TTTTCGCTAAACTGAAAGAAGCTCCGAGTTCTAATAGTAATAATAGTAGC
GAAGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000027_pilon | genome | sc0000027_pilon:568565..571783 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 304-1353:2170 |
| Aaloc | 166-300:1387 |
| Aaloc | 55-165:388 |
| Aaloc | 1-51:1 |
|
