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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000273_pilon:478017..481281- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039252 ID=XLOC_039252|Name=XLOC_039252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3265bp|location=Sequence derived from alignment at sc0000273_pilon:478017..481281- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAGTGAAATTCCCATGTGGTATTTGCAAAAAGCCAGTAGCTAAGAA
CCACCGTGCGATCCAGTGTGACAACTGCTCCTATTGGGTACACATTAAAT
GCAACAATACCACAGACAATGACTATACCAAACTCATATCATCAGATGAA
ACATGGTCATGCCTCAAATGCATCCAGACAGCAATACCATTTCTTCAGTC
CTCTGATGAAGAACTCAAGCTACTCACCCAAGGTAAGTCTGCTTCTGATC
TTGACCTATTTGACCCTGATGTGAATATTAATGTCCAATTCTTTAAAGAC
ATTGATAAGGTCCTTGAAAATGAAGAGTTTAGTGACACTCAAATATCCTC
TTTTTATCGTACACTCAGTGAACTGAATGAACTCAACATAGACAACTCCC
AATCTCTTTCTTTATTGCATTTGAACATTGCTTCTCTCAATTTACACCAG
GACGAGCTTAGAACTCTTATCAAAAATTGTGATACAAAATTTAACTTTAT
AGGAATTTCTGAAACTGGATTCTCAAAATCTACCCCCAAATCTATTAATC
TTGAGGATTACATACCACTGGACACCCCAACTAAATCAAAAAAGGGAGGC
ACTCGTCTCTACATCAAAAATAACTTTCATTACATCCCCAGACCTGATTT
AGAATTAATCAAAGACATGGAGCTTGAGTCTACAGCTGTTGAAGTAATAA
ATGAAAACAAAAATTTCATTGTTATGGTCATCTACCGACATCCCAATATG
GATATTTCAGAATTCAATGTTTTGTACTCCAACCTCTTAGACAAAATCTC
AAAAGAAAATAAACAAGCCTTTATCATGGGTGATTTTAACATAGATCTAC
TAAAACATGAATCCCATGAAGAAACAAGCAAATTTCTAAACTCTAACTTT
TCTAACTGCTTTAAACCTCTTATTTCTGGACCAACAAGAATCACTCCCCA
CAGCAAAACACTTATCGACAACATTTTTACCAATAGTCTCAAAGAAGTTG
TTCAGGCTGGAAACTTGATTACCTCAATTTCGGACCATCTACCTCAGTAT
GCTATTCTTAACTGGAATGTCAAAACCAAACAAAATCAAAAAGCTAAAAT
CTTTAAAAGAGATTTCAGAAAATTTGATCGAAACAATTTGTTTCATGAGT
TCTCAGTTATCTCTTGGGAAAAAACACCTGGTGAGAAACTCAACATCTTT
ATCAATCAAACAACAGAAGTAATTGACAGACATGCACCAATGAAATCTTT
TAAAAACAAATATACAAAAGCTCGAAAACCTTAGATAACTGCAGGCATAC
TGAAGTCTATTAACACAAGAGATATCCTCCAAAAAAAAATACTTTAGATC
CAAAACACCTGCCTTAAAGCAAGAAAAACACAAGGCTTATAAAAAATACA
AAAATCTTCTTCTGAAAATAATGAGACAAAGTAAAGCTGAATATTACAAA
AAATATTTCAATGACCATAAAACCAATTTGAAACTTGTCTGGGGTGCCAT
CCATGAAGTGACCAACAGCAAATCTAAATCTGACTTGAGTCCAAAACTTA
TCATCCAAAACCAAAAAAAATTATGCAAAAATGAAGAAATTGCTGAAGCT
TTCAATGAGTACTATGGTTCTATTGCTGACAAGACCAAAGCTGAAATTCC
ACCTACGGATAAAGTCTTCAATGACTATCTTGGTGCGCCTAACCCTGATT
CTGTGTTTTTTCACCCCACATCTCCTGATGTCATCAATAAATTAATCAAT
GAACTCGACGAGAAAAAGGCAAACGGTCCATCGAGTATTCCCACGTTTTT
CCTAAAACTCATTAGTCCTAGGGCATCCATCATTCTTGCTGACATCTTCA
ATGAATGCCTCCAGTCTGGAACTTATCCTGACTGTTTGAAAAAAGCCTCT
ATCAAACCTCTGCACAAGAAAGCCTCTAAATTAGAGATCGGTAACTACCG
ACCCATTTCTCTGTTATCCAATATCAACAAAATTTTTGAGAAACTTATTC
ACTTCAGACTCTCTGAATTTTTTACCCAACACGACATTATCTTCAAAAAC
CAATTTGGATTCAGAGAGCGTCACAGCACAAACCATGCAATAATTGCTCT
CACTGAACTAGTGAGAGAAGCCCTTGATAACAAAGAATTTGCTGCAGGAA
TTTTTATTGATCTTAAAAAAGCGTTTGATACTGTGGAACACAGTATCCTT
CTTCACAAACTTCGTCACTATGGTGTCAGAGGCAAACCTTTTGAATTAAT
TTTGTCCTATCTCAGTAATAGAACTCATGGTACTCTCATCCAAAACACTC
TTTCAAGTCAAATTGAACAAAAACATGGTGTCCCACAAGGATCTGTGCTT
GGTCCTCTTTTCTTCATTATTTACATTAACGATTTGAACAAAGCTATAGA
CCACTGCTCAACTATACACTTTGCTGATGACACTAGCCTGGTTTACAGCC
ACAAGTCACTGAAAACCCTAAACAACATAATTAATAAGGATCTCACACAC
CTGGTCCACTGGCTCAGAGCAAACAAAATCTGCCTGAATGCATCAAAAAC
AGAAATAATTCTTTTCAAATCCAAGTTCAAGACAATTACGAAAAACCTGA
ATTTTAGATTGAGTGGCCAAAAACTGGAGCTATCAAAAACGGTAAGTTAC
TTAGGTGTCATCATTGATGAAAATCTTGACTGGGATTCCCAAATTTCCAA
GACTGCCCTCAAGCTTTCAAGAGCAGTTGGTATGCTCAGTAAACTTCGAC
ACTATGTAGACTACAAAACTCTTTTATCTGTTTACTATGCCCTTTTTGAA
TCTCATATCAGCTACTTTATCCAATCTCTTGGTCATGTCAAGATTGCCTC
ATTAGACAAGCTGGAAAAACTCCAAAATAAGGCACTCAGGATTATCCATT
TTAAAGGCCCTCAGGATTCTGCCAAGCCTTTATATGTAAATAGCAGAATC
TTGCCCATTAGGTACGACATGAAAGAAAAAAACTGTCTATTTGCATATGA
TTTTCACAAAAACAGAGCCCCAAAGTACTTTTCCACCTTCCTCTCTCCCA
TAGGTAATAATGCTCCCCATGTCACAAGAAACAAGCAATTGTCAATCACC
AGAACAAAGACGGTAATGTATGGATCGCACAACATAGCTAATCTTATCAC
CAAAGACTGAAATGAAATCCACCCCCATCTACCTTCCCTTGACCAAATTA
CCAGCAAATCCACTTTCAAGGCCCACCTTCATGCTTACCTTCTCACTAAA
CTTGCCTCAAGTTAA Coding sequence (CDS) from alignment at sc0000273_pilon:478017..481281- >XLOC_039252 ID=XLOC_039252|Name=XLOC_039252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000273_pilon:478017..481281- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAGTGAAATTCCCATGTGGTATTTGCAAAAAGCCAGTAGCTAAGAA
CCACCGTGCGATCCAGTGTGACAACTGCTCCTATTGGGTACACATTAAAT
GCAACAATACCACAGACAATGACTATACCAAACTCATATCATCAGATGAA
ACATGGTCATGCCTCAAATGCATCCAGACAGCAATACCATTTCTTCAGTC
CTCTGATGAAGAACTCAAGCTACTCACCCAAGATGCCAGTGAAATTCCCA
TGTGGTATTTGCAAAAAGCCAGTAGCTAAGAACCACCGTGCGATCCAGTG
TGACAACTGCTCCTATTGGGTACACATTAAATGCAACAATACCACAGACA
ATGACTATACCAAACTCATATCATCAGATGAAACATGGTCATGCCTCAAA
TGCATCCAGACAGCAATACCATTTCTTCAGTCCTCTGATGAAGAACTCAA
GCTACTCACCCAAGGTAATAATGCTCCCCATGTCACAAGAAACAAGCAAT
TGTCAATCACCAGAACAAAGACGGTAATGTATGGATCGCACAACATAGCT
AATCTTATCACCAAAGACTGAAATGAAATCCACCCCCATCTACCTTCCCT
TGACCAAATTACCAGCAAATCCACTTTCAAGGCCCACCTTCATGCTTACC
TTCTCACTAAACTTGCCTCAAGTTAAGTAATAATGCTCCCCATGTCACAA
GAAACAAGCAATTGTCAATCACCAGAACAAAGACGGTAATGTATGGATCG
CACAACATAGCTAATCTTATCACCAAAGACTGAAATGAAATCCACCCCCA
TCTACCTTCCCTTGACCAAATTACCAGCAAATCCACTTTCAAGGCCCACC
TTCATGCTTACCTTCTCACTAAACTTGCCTCAAGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000273_pilon | genome | sc0000273_pilon:478017..481281 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 235-444:211 |
| Aaloc | 1-231:3266 |
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