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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000572_pilon:51..5529- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039246 ID=XLOC_039246|Name=XLOC_039246|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5479bp|location=Sequence derived from alignment at sc0000572_pilon:51..5529- (Clytia hemisphaerica_ch_hm2_pilon)
GCGCGAATCAAAAAACCTATCACCTGTAAAATACGTGTTTATGAAAGTAT
CGAAAAGACTGTGGAATATGCAAAAAGATTGGAACGAGCGGGGGCTAAGG
TAAGAAGATTGGAGAGTCTATAATAAATGTTGACATTTGGTGCTCAGAGT
CATTCACAATAGTACAAGAAAAAAGCATGACTATTGATATCCCGCTGCAT
GCTTTACTTCCTAACTAGTTGAGAGAAAATAAATACAAACTCTCGATGAC
GGAATTAATTTGTGGAGCTTTGGAGATTTTGCTCGCCAGCTGGAAAGTAC
TACTATAGTTTTCTACTGAAATAACTATAGACATACAAACAGAATAGATA
TTTTTGTGTAGTCTAGGATTTTTAGACAGTCTTGCGATTACTTTCACGGA
GTCCAGGCTATCTAAGAACTGAACGGAACATTTGAAAGAGCGGGCCTTTG
TTTTAAGCGCTCGCACATTGACCATTCGGCTCCTTATTGATAGACCTAAA
GAGAAAGGGAACAGGTTTTGGCCGGAGATAAATAGTCCTACAGCTACGAT
CACTGTGCACATAAAATAAACACGGTACACAGACCAAACCACATAATATA
TACCCGCATTATCAGAGCTAACGAAGTACGGAATGCGCTATTACCTGAAC
TTTCTCTTCTCAGATCATCACAGTTCACGGACGACGTCGTGAACAACGAG
GCCCGCTCACCGGTATTGCAAGTTGGGATCACATCAAAGCGGTCAAGGAG
GCTGTTTCCGTGCCCGTATTTGCTAACGGAAACATCCAGTATTTGCGGGA
CGTCGAAAAATGTATAGAGTATACCAAAGTGGATGCTGTGATGAGTGCAG
GTTGGTCTCCTTTCCTACTTATCAGGTTTTTAACCATTAATACGCTCAAC
TGCAGGGGAAATCATCTAATGTTTGCAGGGATGTGTTTTTATTTACGTTT
AAACAACTTTGTCGTGAAACAGCCACAATCTCAGAACTCAATGAAAATCT
TTTGTGGTGGAAAAGCTAAAAAACAGGTTTTCGGCCTCTAAAAAACATAA
ACAAAACATGGTGGCGTTATTGACTAAATAGGAAATTGTTTGAAATTGTT
TTTTTATTAATTTTATAGTTGAGCAAGTGCGGTTAGCACGTTCGACAATA
TTCACAAAGGTGTTGTAAGTAATTCTCTCTGTAGGTAATATCTCTAAAAC
AGTTTATTTGAATAGCCACAGACAATGTTTTTTTTTTTTTTACTTTTTAG
AGGGTGCATTATACAATCCCGCCATATTCACAGGGCGGCAACCGCCTGCA
TGGGAGATGGTGGATAAATACTTAGCATACTGCAATCAATATCCGACCAA
TTTGAGTTATGTGAGAGGACATTTATTTCGCATGTGGCAAAAGTGGTATG
TTCAAAACTCAAAATTATTTTTCTCTCGTTTGAACAATTATTTCAATGGA
ATATTTTAACGGGAAATTTTTTTTCAAGGACTAAATTTCGTAGATTTTGC
GGTTTTCGGTTTAGCTCAACGCAGATGAAATAGTTTACGCCTGAAATTTG
ATAAGGCTCTTGACAGGTCCTAATACGTCACATCTGGAGATAAGTGTGCT
ATTGATAGAAAAAATTCCAAATAAAAGAGCATAAAATATCACGGTATGAA
TTTGTGTTCCTAAACTATAAACGAAATTTCAAGCAAAAACAAGTTGATTG
GTTGCGTGCAAGTATGATGACCCCTTCCCTGACTACCTTACCCAAATATG
TGACCCCCCAAGCGATTTGGAGTACATTAAAAATGAGACCGGTCTTGGTG
CGGACAGATCGATAAAATGTGCGGCGAAAAAGCGGCGGAAAGATTATCGT
GCGGTTAAATGATACCTTTGTATCTACCAGAAATTATCCAAAAATCATTC
CTAGAAATTCCATTCAAACGCACTTGATCGGTCACTAAAGAGCACCATTA
GAATGAGTGCGGTATTCAGTGCGGTCATGGTGCGGACATTTTTGTTTTTA
TTATTTTGCTTGTTTGAACTCGAGGCTGAAATTCTTACGGCAATCGAAAG
AAATATAAACAAACGGCGGGGACCGCACCATCGTCCACTTTCGTCGGCAC
TTTGTCCGCGCGGACCATACGGTACTGTGCGGTCTTCTGGCCGCTTTTTT
CAAATTTGAGTCGCGCAATTAACCAGTCCAAAAGCGGCAGAGGCATGACC
GCACAAATACCGGTTTCATTTTTAATGTACTCCAAATCGCTTGGGGGGTC
ACATATAGAAGTCGACATAAGTAAATTAATAAAGTATTTTCTTTTAATTG
ATTAAAAGTTTGTTCAACGAATCGAGAGTTTGCGAAATTCAAAAATAATA
CTGACCACATTCCTATCTGACTTTCTCCAAACCTAGTTACCCCCCCCTAT
CGATTTTCTTAATAAATGTTGAATTATTGATATTCTCTTTACGATATATT
GGCAACAAAATGCAGCCCAATTGAGTGGTGTTTCTAAATTTCTTGTGTAG
TGACCCCACAGTGACTCCAAATTCAAAACCACATGAAACACGAGCCAAAC
AAGATTTGAAATTGTTCCGTTTATTGAAAAGAAACTATTTCAACTTTGAC
TTCAAATTCATTAATAAATCACATAGCGTGTTTGTTTTCATTATCATTTC
TGTTACCATAGAAACATTTCAATGACATATTCAGTATTCCATTCTTTGTC
TAAAAAGTCTATTAAAAAAAGTGGAAAATCTTAAAAATAATTTAAGGAGG
TTCATTTCCGTGTGAGTTGATGATTCTAAGGAGTTGATTCACGAAAAAAT
GAAGAAATGTTATCATCTTTCTTTGTTTATCATTTTGCTGTTGATTACAA
ATACTTCACCTAACCAATATCACCTCATTACGTCTAATGGTCATCCTTCT
AAAGACCCTTACTTCGCATTTTCATCCAAGTTCAAAGAACAATGTATAAG
TGTCTGTGGTACCACTCGTAAATGCCATTCCTACACCATCAAACAAACAT
CCACCAATCAATATGAATGTCAATTTTACGATAGCGCTACCATGCGTGAA
GATCTGGTCAGGGTTTCTTTTCGAATTTGCTACTTCATCAATGCGAGGAA
TTGTAAAGATTGGTACAGTATTGGAGCGAGGGCGTCGGGTGTTTACAAGG
TGAACTGGATGGGGCGTTTTTTGAAAGATATCAGATGCAACATGGATATT
GAGGGCGGAGGGTGGATTGTTTTCCAACGACGATATCAGCCTCGCCCCGT
AGATTTCCAACGCTCTTGGAATGATTACAAAGTAGGCTTTGGTGACCCAC
ATCGAGAATTTTGGCTAGGAAACGATTTTATCCATGAAATGAGTATCTCT
GCGAAGCATGATTTTTTGGTGCACGCTGAAGCATACACGGGTGAGACTCT
CATCTCAAGATACGGTGAATTTTACATCGATAACGAAAGTCAAGATTATA
CTCTTCATTTCAATGAAACTCTACTGACCGGGATAGAATCTTTGACGGGT
CCACAAAACCTGAACGGAAAGAAATTCCATACACATGATCGAAGTTACGG
ATCAACTTGTATTACACGCGGTCACGGTCCGTTCTGGTTGAATGATTGTA
TGTACCTTGATCCGAACCATCCCAATTTTCTCCGCTGGAGGACGTACGTC
GACAGTGACGCAATTCAGGAAATTCAATTGATGTTTAAAGCTACAAGTCA
AAACTAAGGACAAATTAGGGACTTTCTCTCTGTACGGTATTGTTCTTCTG
TTTCGGATGGACTTCATTACAAAAGTTATAAAAAGAGGCTTTTCCGTCGT
GAAGAAAAATTTGACGAAGCTTGGTGAATTTGCTGTTTGTTCTGCTAGCG
TGAAAAAGATCCAAGAAGATTTTTGATGTTAAAACCGAACTAAGCAAATT
TTATTAATGCTTATTAAAGCTACATGACCGAACCAAGAATAAATTGACAA
GATTTCCACAGTAAACATGTTATAATGTAAATGATTTGATCCGAACAGTC
AGTAACCAATGTTTCACAGTTTAATGCTGTTTCTCGTGAATATGTATGCA
TCTTGAAGCCATTGTAAACGATCACAAAAAATTTTTCAAATATGTGAAAC
TGACTCTTAAACATCTTCTCCGGTAAGTTTATGTTATAATTTGAAGCCAT
TTTTGAAAGTTTAAAATTTAAAAACAGTTAAGCAAAATAATTTTAAACTT
TGAAAAATAGCTTCAAATATAGCATAAACTCACCAGGGAGGATTGCCATC
AAATGCAACAAATTATACTGACTTTTAAAACAAGACAACGGATGAGTTCA
GCTTTGGTAAAAACGGTCCCACACCTGGATTGTTACATGCAGTTTTTTGA
AAGAAAACATACCTATTGTGTAATTAGGTAATGTATTATTTCATTTTCCT
AAAATTATAATTTGAATTTTTTTATTTAATTTCATTAAGATATCACAGAT
ACTGTCGACTGTTATGAACAGATATGATAAAATTGTTTTTTAAAAAGCAC
CTCACACAATATCACTTCTTTTGGCTGAATTCACGTTGGAAGGCTGCATG
CAATCTATTGAAAAACTTTTCGTCTTACACATGAATAAAATAAAAGTCAT
TTTATATGTATTTTTCCATTAAACCTTCGTTTAATTGAAAGTCATGTAAA
ATAAAATCTACCGAAAATAAAGACTATTTGAGAATAAGGTAGCTTGATCC
TCAGAACTAAGATTTTTCTTCGAATTAGATAAAGGTTCGAATTACCGAGT
GTATTTATAACTTTCCAGGTGAGGGAACCAATGTTTGAATTTACAGAAAG
ATTAATACAAGATTAACAGAGATTCCAATTAGAGAGAGATAAAGTTGACT
GATCTTACAATTCTGTCCCACATCGATTAAGTTCTTCTTCTAAAGCAAAG
TTTAAGATATTTATGTATAATATTGCAATATATTGCAAACAAAGACTGCA
GGAATCTCGTCGGGACTTATCCATCGCTATTTAACCTCCCTTATAAAAGT
AATCAATTGAGAACCTCTGTACCATGAAATCACGAAGGATCATTATAAAT
TTGTTCCAAACGTTTCGGCCTTATCTGAGAGGGTGGTTAGACTATATGCA
AGTACCTTCATCATTTCTTAAGAGGTTGTTGAGCGTCAACAACAATTCAT
TGGTCCTATTAAGAATTGTTGTTGACGCTCAGTTGTTCTAATTTTTTTGA
CATTTCAAATTTAGACGAGTAGTGTTGTAGCCGGTGTTTACTTCTTTGAA
CCTCAATTCCGTGATTCCAGGCTTATGAATCATCTTAAAATGTTCATATT
TTCATTATTCTATACTATAAGTGCATCAATTTTCTTGTCAATTTTTGAGG
GCTATAAGATAAAGTATCTTGTAAATTTTCACACTCAGGAAACTTAGATT
AAAAAAGTTAAAAAAGAAAATTTTAACGTTTTCTAACACTTTGCTTTACT
CTGCTTTCAGTTTGGATAATTTCCCAGAA Coding sequence (CDS) from alignment at sc0000572_pilon:51..5529- >XLOC_039246 ID=XLOC_039246|Name=XLOC_039246|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=900bp|location=Sequence derived from alignment at sc0000572_pilon:51..5529- (Clytia hemisphaerica_ch_hm2_pilon)
GCGCGAATCAAAAAACCTATCACCTGTAAAATACGTGTTTATGAAAGTAT
CGAAAAGACTGTGGAATATGCAAAAAGATTGGAACGAGCGGGGGCTAAGG
CGCGAATCAAAAAACCTATCACCTGTAAAATACGTGTTTATGAAAGTATC
GAAAAGACTGTGGAATATGCAAAAAGATTGGAACGAGCGGGGGCTAAGAT
CATCACAGTTCACGGACGACGTCGTGAACAACGAGGCCCGCTCACCGGTA
TTGCAAGTTGGGATCACATCAAAGCGGTCAAGGAGGCTGTTTCCGTGCCC
GTATTTGCTAACGGAAACATCCAGTATTTGCGGGACGTCGAAAAATGTAT
AGAGTATACCAAAGTGGATGCTGTGATGAGTGCAGATCATCACAGTTCAC
GGACGACGTCGTGAACAACGAGGCCCGCTCACCGGTATTGCAAGTTGGGA
TCACATCAAAGCGGTCAAGGAGGCTGTTTCCGTGCCCGTATTTGCTAACG
GAAACATCCAGTATTTGCGGGACGTCGAAAAATGTATAGAGTATACCAAA
GTGGATGCTGTGATGAGTGCAGAGGGTGCATTATACAATCCCGCCATATT
CACAGGGCGGCAACCGCCTGCATGGGAGATGGTGGATAAATACTTAGCAT
ACTGCAATCAATATCCGACCAATTTGAGTTATGTGAGAGGACATTTATTT
CGCATGTGGCAAAAGTGAGGGTGCATTATACAATCCCGCCATATTCACAG
GGCGGCAACCGCCTGCATGGGAGATGGTGGATAAATACTTAGCATACTGC
AATCAATATCCGACCAATTTGAGTTATGTGAGAGGACATTTATTTCGCAT
GTGGCAAAAGTGTTTGGATAATTTCCCAGAATTTGGATAATTTCCCAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000572_pilon | genome | sc0000572_pilon:51..5529 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 433-450:19 |
| Aaloc | 289-429:4228 |
| Aaloc | 100-285:4817 |
| Aaloc | 1-99:5480 |
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