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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000742_pilon:14865..17066- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039241 ID=XLOC_039241|Name=XLOC_039241|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2202bp|location=Sequence derived from alignment at sc0000742_pilon:14865..17066- (Clytia hemisphaerica_ch_hm2_pilon)
CAGAAGATGAAAATCCTGTATTGCACTATTCTATTTTTGGTACTGGCTTC
TATACATTCAGTTCAAGCAGGTAAGGATTACTTAAGAATATTCTATCCAT
TGTACTAACGCAATTTGTAATAAACGCTACACTTTGTAATGCCTAACGCA
ATTTGTAATACACCTTTACGCACTTTGTAATAAAAACTGACACACTTTGT
AATAAAAAAAACGACGTGCTGCTTTGTAATACAAAAAGCTGACGCGCTTT
GTAATAGCATCTGACGCACTTAGTACATCCATTACGATTATTGACCTCCC
TTATCCTACCTAAGGTTATAATAACGTCATGACAGACCAGGGTGTAAAAT
TGGACACCCTGTTCCAGCAGGTAAAATAATTTTTCAGCCACTCTTCATCT
ATATTAAAATTGAGCTCCTTCATTTTAGCCACGCTGGTTAAAAGGTTCTC
ATTACGTCAAAGTTGGATTTTTTTGACACACTCTATAGACACCCCTTTAG
GTAGTGTTTGGTTTCCACCTGCCGTTTGGTGGAATAGAAAACGTTGTAAA
TTAAAAAACCTTCCTGTCAACATTGGAAAAGTTTTCAGATCTTCTGATTA
TGGCTTTTTAACTTTTTGGGTTCAGGACAGATATAGAAAGTAGGTGCCAA
ATAAATTATGAAGTCTTTATTCTGTCACAGGAATAGTATAATATTTCATA
TTGTGTAACCATTTAGGTATGTCTTGGAACCAGAATGGTAACCGAAAGTA
TGCAGTCAAATTCGTTGCTGCTGGTTTCATAGTTGGATACACAGCTATAT
GGTCTCTATTCATCATCAAATCCGTCATTCTACCGCCGGAAACAAAGACT
GAAGGAATGATTAAATTTAACTATGATCAAAAGCTCCAAATTCGTAACTT
ACTATTTTCAGGTACGTGTTATATTAACCAGCTTAGTATAAAGGACTCAA
ACCATCGTCTATTACACAATGAGCTGGTATCTCCAGTGAAAGACATAGCA
TAGGTTGAAAAAATTCAAAGAAGAAATTCTAGAAAGGACTTGCTAAATTT
GATTGATCCTATACTGATAAACGAATTAGGATCCCCTTGTGTTTAGTAAT
TTTCAATTACTTATAATTTATAGGTGATGAGAGTGAAGTTATCAGCTCAA
AACTCATAAAGTCACAAACAACAATTGCACCATTAATATCAACAAATGAT
TCCACCAGTCACCATGGCAACACAACAGAAAATCCAGTTCTAAAAGAATT
ACATGGCATTAAAAACACAATGTTAGAATTCGAAGGACGAATGAAAAAAC
TTGTTGAATGGGAAAATTATCGCCATCACCATGAAAAGTTGAAAAAACTT
GTCTATATATCTGACGGTAAAGCTGATAAAAAGTACAGCATGTTTCGACC
GAATGTTTTAGTGGACAAAATAAAATTTGATAGCAGCGCTCATTACAAAG
TAATCATCTTGGTAACATCGTTTGCTAAACATTTCGAGCGCCGCCAGTGG
ATCCGCAAAGCGTGGGGCAACCAAACATTTTGGAATAAAAGTGTGGAAAA
TTGGCAAGTAATATTCAATGTAGGAGCTGTTGATTCTGCTGAAGTCCAGC
AAAAGCTGGTTGAAGAATCTAAGAATCACGGTGATATGTTGATTTTAGAT
GTTCCAGAAAACTTTCATAAACTGTCAGAGAAAGTTATGGCAGCCTTATA
TTGGACATACACAAAATTTAGTTTTGAGTTTGTTTTCAAGACAGATGACG
ATGTTTTCATACATATGCAACGTTTGTTGACAAAACTGAATACGACTTGG
TCGCAAGAAAACTTTGTAGGACAAGGAATGATGAAGCAGCCTGTGGACAG
GAGCAAAGGACGTTATGGCGTTTCCGGTAAAGAATGGCCAGGAAAATACT
TTGACCCTTATTGCAGCGGTGGTGGCTACGTTTTATCGCACTATATAATC
GAACGAATAATACCTCATTTCAATTGGGAAAACCCTTTGAAAATAGATGA
CGCATATATTGGTCATTTGGTCAAGTTAGCAGGTGGAAAAGTCTATCGTG
ATAAAAAGGGCTTTGTAATGTCTAACACATGGTTGGAATATACACCAGAG
TTTGTTGTAACACACCCAATAAAGAAGCTTGAATTCCGCGAATTCGCCGA
AAAGAAAGCTGCTATTGAAATTGGAAAGCTCAAATTACAAGAAGTGCAAA
AT Coding sequence (CDS) from alignment at sc0000742_pilon:14865..17066- >XLOC_039241 ID=XLOC_039241|Name=XLOC_039241|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2688bp|location=Sequence derived from alignment at sc0000742_pilon:14865..17066- (Clytia hemisphaerica_ch_hm2_pilon)
CAGAAGATGAAAATCCTGTATTGCACTATTCTATTTTTGGTACTGGCTTC
TATACATTCAGTTCAAGCAGCAGAAGATGAAAATCCTGTATTGCACTATT
CTATTTTTGGTACTGGCTTCTATACATTCAGTTCAAGCAGGTATGTCTTG
GAACCAGAATGGTAACCGAAAGTATGCAGTCAAATTCGTTGCTGCTGGTT
TCATAGTTGGATACACAGCTATATGGTCTCTATTCATCATCAAATCCGTC
ATTCTACCGCCGGAAACAAAGACTGAAGGAATGATTAAATTTAACTATGA
TCAAAAGCTCCAAATTCGTAACTTACTATTTTCAGGTATGTCTTGGAACC
AGAATGGTAACCGAAAGTATGCAGTCAAATTCGTTGCTGCTGGTTTCATA
GTTGGATACACAGCTATATGGTCTCTATTCATCATCAAATCCGTCATTCT
ACCGCCGGAAACAAAGACTGAAGGAATGATTAAATTTAACTATGATCAAA
AGCTCCAAATTCGTAACTTACTATTTTCAGGTGATGAGAGTGAAGTTATC
AGCTCAAAACTCATAAAGTCACAAACAACAATTGCACCATTAATATCAAC
AAATGATTCCACCAGTCACCATGGCAACACAACAGAAAATCCAGTTCTAA
AAGAATTACATGGCATTAAAAACACAATGTTAGAATTCGAAGGACGAATG
AAAAAACTTGTTGAATGGGAAAATTATCGCCATCACCATGAAAAGTTGAA
AAAACTTGTCTATATATCTGACGGTAAAGCTGATAAAAAGTACAGCATGT
TTCGACCGAATGTTTTAGTGGACAAAATAAAATTTGATAGCAGCGCTCAT
TACAAAGTAATCATCTTGGTAACATCGTTTGCTAAACATTTCGAGCGCCG
CCAGTGGATCCGCAAAGCGTGGGGCAACCAAACATTTTGGAATAAAAGTG
TGGAAAATTGGCAAGTAATATTCAATGTAGGAGCTGTTGATTCTGCTGAA
GTCCAGCAAAAGCTGGTTGAAGAATCTAAGAATCACGGTGATATGTTGAT
TTTAGATGTTCCAGAAAACTTTCATAAACTGTCAGAGAAAGTTATGGCAG
CCTTATATTGGACATACACAAAATTTAGTTTTGAGTTTGTTTTCAAGACA
GATGACGATGTTTTCATACATATGCAACGTTTGTTGACAAAACTGAATAC
GACTTGGTCGCAAGAAAACTTTGTAGGACAAGGAATGATGAAGCAGCCTG
TGGACAGGAGCAAAGGACGTTATGGCGTTTCCGGTAAAGAATGGCCAGGA
AAATACTTTGACCCTTATTGCAGCGGTGGTGGCTACGTTTTATCGCACTA
TATAATCGAACGAATAATACCTCATTTCAATTGGGAAAACCCTTTGAAAA
TAGATGACGCATATATTGGTCATTTGGTCAAGTTAGCAGGTGGAAAAGTC
TATCGTGATAAAAAGGGCTTTGTAATGTCTAACACATGGTTGGAATATAC
ACCAGAGTTTGTTGTAACACACCCAATAAAGAAGCTTGAATTCCGCGAAT
TCGCCGAAAAGAAAGCTGCTATTGAAATTGGAAAGCTCAAATTACAAGAA
GTGCAAAATGTGATGAGAGTGAAGTTATCAGCTCAAAACTCATAAAGTCA
CAAACAACAATTGCACCATTAATATCAACAAATGATTCCACCAGTCACCA
TGGCAACACAACAGAAAATCCAGTTCTAAAAGAATTACATGGCATTAAAA
ACACAATGTTAGAATTCGAAGGACGAATGAAAAAACTTGTTGAATGGGAA
AATTATCGCCATCACCATGAAAAGTTGAAAAAACTTGTCTATATATCTGA
CGGTAAAGCTGATAAAAAGTACAGCATGTTTCGACCGAATGTTTTAGTGG
ACAAAATAAAATTTGATAGCAGCGCTCATTACAAAGTAATCATCTTGGTA
ACATCGTTTGCTAAACATTTCGAGCGCCGCCAGTGGATCCGCAAAGCGTG
GGGCAACCAAACATTTTGGAATAAAAGTGTGGAAAATTGGCAAGTAATAT
TCAATGTAGGAGCTGTTGATTCTGCTGAAGTCCAGCAAAAGCTGGTTGAA
GAATCTAAGAATCACGGTGATATGTTGATTTTAGATGTTCCAGAAAACTT
TCATAAACTGTCAGAGAAAGTTATGGCAGCCTTATATTGGACATACACAA
AATTTAGTTTTGAGTTTGTTTTCAAGACAGATGACGATGTTTTCATACAT
ATGCAACGTTTGTTGACAAAACTGAATACGACTTGGTCGCAAGAAAACTT
TGTAGGACAAGGAATGATGAAGCAGCCTGTGGACAGGAGCAAAGGACGTT
ATGGCGTTTCCGGTAAAGAATGGCCAGGAAAATACTTTGACCCTTATTGC
AGCGGTGGTGGCTACGTTTTATCGCACTATATAATCGAACGAATAATACC
TCATTTCAATTGGGAAAACCCTTTGAAAATAGATGACGCATATATTGGTC
ATTTGGTCAAGTTAGCAGGTGGAAAAGTCTATCGTGATAAAAAGGGCTTT
GTAATGTCTAACACATGGTTGGAATATACACCAGAGTTTGTTGTAACACA
CCCAATAAAGAAGCTTGAATTCCGCGAATTCGCCGAAAAGAAAGCTGCTA
TTGAAATTGGAAAGCTCAAATTACAAGAAGTGCAAAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000742_pilon | genome | sc0000742_pilon:14865..17066 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 268-1344:1078 |
| Aaloc | 73-264:1485 |
| Aaloc | 1-69:2203 |
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