XLOC_039236.2 (mRNA) -

Overview
NameXLOC_039236.2
Unique NameXLOC_039236.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000690_pilon:44044..44919+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039236.2 ID=XLOC_039236.2|Name=XLOC_039236.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=876bp|location=Sequence derived from alignment at sc0000690_pilon:44044..44919+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGAAAAGAATGCTTCGTTAACCCTTAGAAATGCTCACTTTACAAAGCT AAAAATTCTAGATCAAATTGGACGGAAACGGTCAACATTTTTAGTTGATG CTTCTCTCTTCACAAATGCATTTCATACAGGCGACTATCTCCTTCAAAAT CAGGAACCTGTTCTTTTAGATCCTGCTCAATTTCATGGGATTAAACCAAT TGCTATCCATCAGGGATCATTTTCAACAGTAGAGAAAGTCTCTTTGTTGG ATGGTGAAACTGTGATGTGTAAATACCACCTAGATGGTGCCTTTGGGCCT CAAGAACTGGCTACTCTAAGCCACGAGCACCGACTATTAACTTTTATTGG AAAACATTCAAACATAGTAAATACTATTGGGCTAGTGCactcctcaaaaa aattttcacatgtTCTTCAATTTCAATCTGGCATGACCCTGTCAAAGATA GTGAAACCAATTAGTTCTTTGCTGCAACTGAAAGGGTTGCTCAATGGCAT AATTGaaggactgaattttttatttgaaaagggCGTATTGCACAACCATT TGGTTGCTGACAACATCATATTTGATGGCTACAAGCCCATCATTATTGGG TTTACGTTTGCCTGTCGTGTTGACACTGCTAAGTTCAACATTGCAGATGT ATTGAAGAAATTCCACGATCAACACCATTTTGCTCCGGAACTTTTCAAAG GTGCTAAAGTCAGTTTTGGTTCTGACATGTTTTCATTCGGTGTATTACTC AAGCTTATCCTAAAGAGAAAGATTAATTTTGATATCGACGATTGTTTGGA AACTCGACTTACGGTTCTTGCTGATCACTGTCTCAAACGAAACCCAAAAG AAAGACCCGCTTATATTTTTCTTGCA

Coding sequence (CDS) from alignment at sc0000690_pilon:44044..44919+

>XLOC_039236.2 ID=XLOC_039236.2|Name=XLOC_039236.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1752bp|location=Sequence derived from alignment at sc0000690_pilon:44044..44919+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGAAAAGAATGCTTCGTTAACCCTTAGAAATGCTCACTTTACAAAGCT
AAAAATTCTAGATCAAATTGGACGGAAACGGTCAACATTTTTAGTTGATG
CTTCTCTCTTCACAAATGCATTTCATACAGGCGACTATCTCCTTCAAAAT
CAGGAACCTGTTCTTTTAGATCCTGCTCAATTTCATGGGATTAAACCAAT
TGCTATCCATCAGGGATCATTTTCAACAGTAGAGAAAGTCTCTTTGTTGG
ATGGTGAAACTGTGATGTGTAAATACCACCTAGATGGTGCCTTTGGGCCT
CAAGAACTGGCTACTCTAAGCCACGAGCACCGACTATTAACTTTTATTGG
AAAACATTCAAACATAGTAAATACTATTGGGCTAGTGCactcctcaaaaa
aattttcacatgtTCTTCAATTTCAATCTGGCATGACCCTGTCAAAGATA
GTGAAACCAATTAGTTCTTTGCTGCAACTGAAAGGGTTGCTCAATGGCAT
AATTGaaggactgaattttttatttgaaaagggCGTATTGCACAACCATT
TGGTTGCTGACAACATCATATTTGATGGCTACAAGCCCATCATTATTGGG
TTTACGTTTGCCTGTCGTGTTGACACTGCTAAGTTCAACATTGCAGATGT
ATTGAAGAAATTCCACGATCAACACCATTTTGCTCCGGAACTTTTCAAAG
GTGCTAAAGTCAGTTTTGGTTCTGACATGTTTTCATTCGGTGTATTACTC
AAGCTTATCCTAAAGAGAAAGATTAATTTTGATATCGACGATTGTTTGGA
AACTCGACTTACGGTTCTTGCTGATCACTGTCTCAAACGAAACCCAAAAG
AAAGACCCGCTTATATTTTTCTTGCAAAAGAAAAGAATGCTTCGTTAACC
CTTAGAAATGCTCACTTTACAAAGCTAAAAATTCTAGATCAAATTGGACG
GAAACGGTCAACATTTTTAGTTGATGCTTCTCTCTTCACAAATGCATTTC
ATACAGGCGACTATCTCCTTCAAAATCAGGAACCTGTTCTTTTAGATCCT
GCTCAATTTCATGGGATTAAACCAATTGCTATCCATCAGGGATCATTTTC
AACAGTAGAGAAAGTCTCTTTGTTGGATGGTGAAACTGTGATGTGTAAAT
ACCACCTAGATGGTGCCTTTGGGCCTCAAGAACTGGCTACTCTAAGCCAC
GAGCACCGACTATTAACTTTTATTGGAAAACATTCAAACATAGTAAATAC
TATTGGGCTAGTGCactcctcaaaaaaattttcacatgtTCTTCAATTTC
AATCTGGCATGACCCTGTCAAAGATAGTGAAACCAATTAGTTCTTTGCTG
CAACTGAAAGGGTTGCTCAATGGCATAATTGaaggactgaattttttatt
tgaaaagggCGTATTGCACAACCATTTGGTTGCTGACAACATCATATTTG
ATGGCTACAAGCCCATCATTATTGGGTTTACGTTTGCCTGTCGTGTTGAC
ACTGCTAAGTTCAACATTGCAGATGTATTGAAGAAATTCCACGATCAACA
CCATTTTGCTCCGGAACTTTTCAAAGGTGCTAAAGTCAGTTTTGGTTCTG
ACATGTTTTCATTCGGTGTATTACTCAAGCTTATCCTAAAGAGAAAGATT
AATTTTGATATCGACGATTGTTTGGAAACTCGACTTACGGTTCTTGCTGA
TCACTGTCTCAAACGAAACCCAAAAGAAAGACCCGCTTATATTTTTCTTG
CA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039236.2XLOC_039236.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000690_pilongenomesc0000690_pilon:44044..44919 +
Properties
Property NameValue
Aaloc1-876:1