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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000229_pilon:478746..480825+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039235 ID=XLOC_039235|Name=XLOC_039235|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2080bp|location=Sequence derived from alignment at sc0000229_pilon:478746..480825+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAGCACCTGCAGATTGGAAGCACTCCTATTACCTCAAACTTAAAGATTT
CTACAAAGAGTCTGCTTTAGTTCTAATGAGCGAAAAAGTATGTGACGCTG
CAATGCACCAACGTAAAGCTAAAAGGTAAATGGTTAAGACAAATCATAAT
AAAATgtattctttcattttatttatcattgaaaatttttttaatccttC
AAAATCTTTCACATACTGTGGAACTGTATATTATAGAAGCAAATTATGTC
TTCTTTCTGACCCTGATgcttttaaagaaagtttttgaccTCTAACGTAA
AATGTTGCACTTCTACTTTTCAGACTCGAGCGAAGCTTAACATCGTTTGA
AAAGGTTCATAAAATAGCTAAAAGATGGAAAACCACAGAGAGCCAATTTC
GCAATCAACATCTGTCTTTTTTGCAAGAAAAGTCGAACGAAACAGCATCC
ACACTGTACAGCAGGTGCTCCGAAAGACTAATGTTGCTAACTCTAAAGAA
ACGATATGCAGGTAAGTGTTTTTAGTGACACCTATTAACATTCTATTCAA
AAATCTCGAGTTACCATAGAAAATTACAAATTAGGCGCGTTGATACTTTA
AACGTTGTAGTGTATGAGGAACTTTCAATTCAAATGATAAAGTGAAGTGT
GATGTGTCGATTTGGTTGTAATGAAGTGCAATAAAAATCCGTTTTTCTAC
TTTTAGATGGTTCAGCTATAGCAACGAGGTTGAGCAAACAAATCAATAAA
GTGTgcaaagaaataaagaatttaTTGGCTTCATACAATTCCATGCGATC
AGAGATTTCGCCTAAATTCAAACCTGTTGATTATAAAGAGGCTCTAGATG
TCAAGTCTTCAATATATAACGAAATAAATCTTGTATCCAACTTGGATGAG
GTAAGTGTAAAAGTGTGTAAaaaaggtcataagtagagGAGCAAAAAGAG
AAATCTATTAGTTTGAGCTAAGCCCgggggggCACTTAAGGTAAATGAct
taccagacgttcggcccttaagggtcggtttttcatagttcagttagtgc
actgtaagggtaggaaattacaaaacttcacagaactgcactgtaagggt
aggaaattgtaataaaaggccaattttttggtaaaattggcaaaaaaatt
gggCAATTATGGAgtaaaattggtcaattttggaggaaaatttccacatt
ttcttggaaattgcaaaaatttcgcccttacgggcaagaaactttgaaaa
agtgcactgtaagggtacgatttttcatggaaattcactgcactgtaagg
gtccgattttggaagccaaattttgggccgaacgtatggtcgttttcaga
tcgagtgccccccccccccggggagcTAAGAGATTGGGTGAAACGTTCGA
AGTATTTCGAGGGTCAATCGGTGCAAGTTTAGTGTGTGTAAAGAACCATC
CATTGATGGTACTAAGTCTTTAAGTTCCAACCGGGTCTTCCTATAAACTT
TCGACCACATTTCGATATTGTCAAATTTTCTTCAAGGACGTTTTATGGAT
GAAGTCTACTATCGCAAAAAAGTGTCCTTCATAATGGTTTGGTCTCAAAT
TTGAATCCTTACAGTTTCTTCTCTCCTCTTTCATTTTAGGCAAGAAGTTC
ACAAGTCCCTATCAACGTAGTGAAGTCACTCGTACAATTCTACCTCAGAA
AACAAAGAGCACAAGAAGAAATAATTATCGTCGAGGAAGAAATGAGATCG
ACATTGCACTTTTGGGAAAATCAATTGACTTTTCTTGATGAATGTGCTTC
ACACCAAACTTCTGTTGGGATTAGATACCTCTTAAGAGAAAGAATCTTGA
TTGTGAAGAACTTCCTTGGGgatttaaaaaaactctttgAGTTTGCTACC
GAGCCAGTAGAACGAGTAGAAATTAATCACACGAATAATCATATCTCCTT
GAATGGCTCCGAAAATGAAGAGTACCTATTCAGTGATCAAGATTTTTCGA
GCGATGAAGAAGCCATATCATCTGGTGACAGTGACAGCGACACTGGTGAC
TCTGTTTTAAGTGATGACTTGTACATATAA Coding sequence (CDS) from alignment at sc0000229_pilon:478746..480825+ >XLOC_039235 ID=XLOC_039235|Name=XLOC_039235|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000229_pilon:478746..480825+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAGCACCTGCAGATTGGAAGCACTCCTATTACCTCAAACTTAAAGATTT
CTACAAAGAGTCTGCTTTAGTTCTAATGAGCGAAAAAGTATGTGACGCTG
CAATGCACCAACGTAAAGCTAAAAGTCAGCACCTGCAGATTGGAAGCACT
CCTATTACCTCAAACTTAAAGATTTCTACAAAGAGTCTGCTTTAGTTCTA
ATGAGCGAAAAAGTATGTGACGCTGCAATGCACCAACGTAAAGCTAAAAG
ACTCGAGCGAAGCTTAACATCGTTTGAAAAGGTTCATAAAATAGCTAAAA
GATGGAAAACCACAGAGAGCCAATTTCGCAATCAACATCTGTCTTTTTTG
CAAGAAAAGTCGAACGAAACAGCATCCACACTGTACAGCAGGTGCTCCGA
AAGACTAATGTTGCTAACTCTAAAGAAACGATATGCAGACTCGAGCGAAG
CTTAACATCGTTTGAAAAGGTTCATAAAATAGCTAAAAGATGGAAAACCA
CAGAGAGCCAATTTCGCAATCAACATCTGTCTTTTTTGCAAGAAAAGTCG
AACGAAACAGCATCCACACTGTACAGCAGGTGCTCCGAAAGACTAATGTT
GCTAACTCTAAAGAAACGATATGCAGATGGTTCAGCTATAGCAACGAGGT
TGAGCAAACAAATCAATAAAGTGTgcaaagaaataaagaatttaTTGGCT
TCATACAATTCCATGCGATCAGAGATTTCGCCTAAATTCAAACCTGTTGA
TTATAAAGAGGCTCTAGATGTCAAGTCTTCAATATATAACGAAATAAATC
TTGTATCCAACTTGGATGAGATGGTTCAGCTATAGCAACGAGGTTGAGCA
AACAAATCAATAAAGTGTgcaaagaaataaagaatttaTTGGCTTCATAC
AATTCCATGCGATCAGAGATTTCGCCTAAATTCAAACCTGTTGATTATAA
AGAGGCTCTAGATGTCAAGTCTTCAATATATAACGAAATAAATCTTGTAT
CCAACTTGGATGAGGCAAGAAGTTCACAAGTCCCTATCAACGTAGTGAAG
TCACTCGTACAATTCTACCTCAGAAAACAAAGAGCACAAGAAGAAATAAT
TATCGTCGAGGAAGAAATGAGATCGACATTGCACTTTTGGGAAAATCAAT
TGACTTTTCTTGATGAATGTGCTTCACACCAAACTTCTGTTGGGATTAGA
TACCTCTTAAGAGAAAGAATCTTGATTGTGAAGAACTTCCTTGGGgattt
aaaaaaactctttgAGTTTGCTACCGAGCCAGTAGAACGAGTAGAAATTA
ATCACACGAATAATCATATCTCCTTGAATGGCTCCGAAAATGAAGAGTAC
CTATTCAGTGATCAAGATTTTTCGAGCGATGAAGAAGCCATATCATCTGG
TGACAGTGACAGCGACACTGGTGACTCTGTTTTAAGTGATGACTTGTACA
TATAAGCAAGAAGTTCACAAGTCCCTATCAACGTAGTGAAGTCACTCGTA
CAATTCTACCTCAGAAAACAAAGAGCACAAGAAGAAATAATTATCGTCGA
GGAAGAAATGAGATCGACATTGCACTTTTGGGAAAATCAATTGACTTTTC
TTGATGAATGTGCTTCACACCAAACTTCTGTTGGGATTAGATACCTCTTA
AGAGAAAGAATCTTGATTGTGAAGAACTTCCTTGGGgatttaaaaaaact
ctttgAGTTTGCTACCGAGCCAGTAGAACGAGTAGAAATTAATCACACGA
ATAATCATATCTCCTTGAATGGCTCCGAAAATGAAGAGTACCTATTCAGT
GATCAAGATTTTTCGAGCGATGAAGAAGCCATATCATCTGGTGACAGTGA
CAGCGACACTGGTGACTCTGTTTTAAGTGATGACTTGTACATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000229_pilon | genome | sc0000229_pilon:478746..480825 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 511-951:1640 |
| Aaloc | 319-510:709 |
| Aaloc | 130-315:325 |
| Aaloc | 4-126:1 |
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