XLOC_039204 (mRNA) -

Overview
NameXLOC_039204
Unique NameXLOC_039204
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000015_pilon:964714..966545-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039204 ID=XLOC_039204|Name=XLOC_039204|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1832bp|location=Sequence derived from alignment at sc0000015_pilon:964714..966545- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAAGATACAGGAAGGATTGTGCCGATCTACCAACAAATTGTATG CTATTTTTATTCTGATCTCTTCAGGAAATAGTTTACTAGCAAACGACCAT TTTCGTAATAGCGTACGAGCCTTTTCGGGTTTAATCCAGCCCACTATAAA GAATGCCGAATACGACGACATGTCGTGTCGACGTCGGTTGCCTAACACAG CAGGGGAAAATTAACCGCTGCGAAAATTGCATTATATGCAGTTCCAGACA AAATGATCATCAAACCGAGATTTGGCCGAACGAGATTAATAGGAAACATA TAATCACAGCTCCTGTTTTAACTCCATTTTGAAATTAATTTTTTCTTTTG TTAATTATTTTTTTTTTATAAGCATACAAAAATCCGAAAACAGGCTCAGA GATGCTTAGGTCGAAAGCTTAATGAGGCTGAAAAATGCTTGAGGGGATGC TTAAATCTAAAGCATAAATTTAAGGAAATACTGAAAATCCTTGAAATTCC AGCCAAAATCAGGAAAAAAAATTTTTTTGTAGGCTCAAGCAATGCTTGCC ATATGCTTAATTTTTCCCCATATCTGAGCCTAGATATGCTCATAAGTGCA ATGCTTATAAAAAAACATTAAATTACTTTGTAAGTCGTTGCTGACACTCA ACGTTGTTTCAACGTTCGTCTAACATTATACAGAAAAAGATATATATATG CGTTAGGTTGCCGCTAACACAAAGTTGTGTGCAAGCTTTTGAAACATTTT CATGTTCATTTTAGCCTCCACGGAAAAATCTCCTTGAGCGGAGCCGCCGA AAGAAGGTTCCCATAATTCATGAATCGCCGCCTTCAGAACTTCCCTTATT CATAAGGAAGAAGTATCCACATCAACAGCATGTTTTCAATTCTGGAGAAA AAGGCAATACCTTTTCAAAACATGATAATCGACACTCGTTACAAGACAAA GGTGAATATTTTGGTCAGGTAAGAACTTTGATTCATAAGCTGTCCCTAAA AGCGACTTATTTTTCCTTTCTCTTTCCAAATATCAAGAACACTAGACCCA AGTCCAAAGTCTCTCTAAGCATCATAAAAATCAGAAATTTTTAAATTAAT CTCTCTAAGGGTCGGAAAATTCACGATTTTTAGGAAAATTTTTTGATTTC GAGAGAAAAATTGTAAAAATCGAAGAACATTTTTCATTAAGTCTCTCTAA GGGTCTAGACTAAGGGTCGCCTTTACAGCAAAAATCAGTCTCTGTAAGGG TCGGTTTTTGGAGGTCCCGTCCGAATATACCCCTCATTCGCCAATCCTAG TATCCCCCTGGAATCACTGTTTGATACACTAGTTCGGCTTACTATAATTT GTATTGCTTTTCACGTTTCAAACAATCTTGAGAATAATGTGAAGGAACCT TAACAATTCCTGCATTTCTTTCACGAACAGGGGCTAGGAAAAAGATATTT TAAAGAAATCAACCATCACCATAGAAAAACACAATTTAAAATATCAACAC CTGAATCTCAACAAAACTGTTTAGAAGAACAAAAAGATAAACATTCTGAT TCAAAAACACCACAAGTCATCACACACCATCGTAGATTTCCAAGACAATA TAACAAACCATCACCAAATAATACAATTCCTACTGACACAACCAGTTGGT GGCCACCAGCAGACAATTACCGTACACCAACTCAAGTTTTAACTATAACT CAAACCATTCCAGGGCAAGCTAACTCATGGCGTTATTCCTATAAATCAAC CATCTTTCCATCGATAGCGACCAGAGATGGTTGTCATGGTAATCACCATA GAACGAATCCAATCCTGGCTTCAACTTGCTGA

Coding sequence (CDS) from alignment at sc0000015_pilon:964714..966545-

>XLOC_039204 ID=XLOC_039204|Name=XLOC_039204|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1302bp|location=Sequence derived from alignment at sc0000015_pilon:964714..966545- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAAGATACAGGAAGGATTGTGCCGATCTACCAACAAATTATGGA
GAAAGATACAGGAAGGATTGTGCCGATCTACCAACAAATTCCTCCACGGA
AAAATCTCCTTGAGCGGAGCCGCCGAAAGAAGGTTCCCATAATTCATGAA
TCGCCGCCTTCAGAACTTCCCTTATTCATAAGGAAGAAGTATCCACATCA
ACAGCATGTTTTCAATTCTGGAGAAAAAGGCAATACCTTTTCAAAACATG
ATAATCGACACTCGTTACAAGACAAAGGTGAATATTTTGGTCAGCCTCCA
CGGAAAAATCTCCTTGAGCGGAGCCGCCGAAAGAAGGTTCCCATAATTCA
TGAATCGCCGCCTTCAGAACTTCCCTTATTCATAAGGAAGAAGTATCCAC
ATCAACAGCATGTTTTCAATTCTGGAGAAAAAGGCAATACCTTTTCAAAA
CATGATAATCGACACTCGTTACAAGACAAAGGTGAATATTTTGGTCAGGG
GCTAGGAAAAAGATATTTTAAAGAAATCAACCATCACCATAGAAAAACAC
AATTTAAAATATCAACACCTGAATCTCAACAAAACTGTTTAGAAGAACAA
AAAGATAAACATTCTGATTCAAAAACACCACAAGTCATCACACACCATCG
TAGATTTCCAAGACAATATAACAAACCATCACCAAATAATACAATTCCTA
CTGACACAACCAGTTGGTGGCCACCAGCAGACAATTACCGTACACCAACT
CAAGTTTTAACTATAACTCAAACCATTCCAGGGCAAGCTAACTCATGGCG
TTATTCCTATAAATCAACCATCTTTCCATCGATAGCGACCAGAGATGGTT
GTCATGGTAATCACCATAGAACGAATCCAATCCTGGCTTCAACTTGCTGA
GGGCTAGGAAAAAGATATTTTAAAGAAATCAACCATCACCATAGAAAAAC
ACAATTTAAAATATCAACACCTGAATCTCAACAAAACTGTTTAGAAGAAC
AAAAAGATAAACATTCTGATTCAAAAACACCACAAGTCATCACACACCAT
CGTAGATTTCCAAGACAATATAACAAACCATCACCAAATAATACAATTCC
TACTGACACAACCAGTTGGTGGCCACCAGCAGACAATTACCGTACACCAA
CTCAAGTTTTAACTATAACTCAAACCATTCCAGGGCAAGCTAACTCATGG
CGTTATTCCTATAAATCAACCATCTTTCCATCGATAGCGACCAGAGATGG
TTGTCATGGTAATCACCATAGAACGAATCCAATCCTGGCTTCAACTTGCT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039204XLOC_039204-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000015_pilongenomesc0000015_pilon:964714..966545 -
Properties
Property NameValue
Aaloc250-651:403
Aaloc46-249:1069
Aaloc1-45:1833