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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000015_pilon:767050..769032+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039201 ID=XLOC_039201|Name=XLOC_039201|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1983bp|location=Sequence derived from alignment at sc0000015_pilon:767050..769032+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACAAACTCTAGTTGTGTCACTAAATCAGGCTGCTTCGAATCAACACGA
GACTACTAAATCAACCGATCAGGCTCCTTTGATTCAACACGTGCCTGCTT
CGATTGACCACGTAACTgtcaaatcaaccaatcaaaaccCTTATGTTCAA
CACGTGACTGCTAAATCAACCAATCAGGCTCTACCGATTCAACACGTGAC
TGTTTCGAGTGACCACGTAACTGTTAAGTCAACCAATCATGCTCCTTCGA
TTCAACACATGACTGCTAAATCGACCAATCATGCTCCTTTAATTAAACAC
GTGACTGCTCAACTAACCAATCAGACTTCATCGATTGAACAAGTGACTTC
TAAATCAACCAATCAGGCTCTACCGATTCAAAACTTGGCTGCTACAACAG
TAAAGCAGTACCCTTCGATCCGGCCCGTGATAATATCAACCAATCGAGAT
ACCTCTAAGGAAGCTACTAAAAAACCTCAATGTTCCTCCATACGCTCTTC
AACTCTCACACGTACCGCAGACAAAATAGCCAGTAAAAGAAAAGAAGTCA
CTTATTCTATAGCAAAACCAACAACTGAAAAGCCCTCCTCAACATCAGTA
GATTCTCCTGAATTCATGAGCATCGACCTTCCCAAATTACCGACGTATGT
TCTACACCCATCCTCTGATGAAATGGCCCCGACTGCGAAACCTGCCAAGC
AGATGGCTGTGTCTGTTGAATCCTCCAATCAGatatttccttcaaaaatt
tcatccaatcagatcgcttCGTCCATGGATACATCCAATCAGAACACTTC
TTCCTCGAAAGCAAACAATCCGATTACTCCAATCACGCCCACCAAGTCTG
TTTCTTCTGTGAGACCGTCCAATAAGATGAAAGCAGTTACTTCAAACGGC
CCGCATCGGCCGATCGATATTTCAGCCATATCAGCTATTCCCGGTGTTCC
GATAAAAGCACCGATATATCTTATACCGGTCACGTCTGCTTCGGTGCCAC
AAAATAATACTGCCACATCTTTTAATAAAAAGCTTCAAAACATTGTCGAA
TGCTTTAAcgagaaaatcaaaaacaagacAATCTTGCCTAGTAATGGGTC
TACCAATATAGATGACGCGACTTTGAAGAATAATACCGATAACGGAGAGC
TCCAAAAGCTCTCAAAAACACCCTCTGTATCATTAGAAAACAATGTTGTA
AAAGAACATACTAAGCCAACCAACCCAGGGCCAACTTATCCAACGCCAGG
TGTCAAGTTACAGCAGTCAAAAGACACTATATATCGTCTTTTACGAAAAC
AATACGGAGATGCTATCGATTTACGAGAATTAAACGAATGCCACTACGAc
tcgaaaacaatcgaaaaaattacaaaaaatcttcttgaacgtgacaaaat
cgcaaacccaaaaacccccgaaacTGCATCTCAACATCAAACAACTCCTG
TCCTACCCTCGAATTATACCATCGATGTATCAGGCCGTAAACCAAACAAA
GCTCCAATCCCTTACCGTACTACAACTTCTAAGATAACTTCGCCCCCTGC
TTTTCCTTCTCCTCCCTCAAGATTGAGAAGGTTGGCTCCTAAGCCATCAA
GATATATTCAAATGGAAGCTGCAAACATAAAGAAAACACCAAGAAACACA
CCCAGAACGAGGTCCAATCTAAATTCGCAGATTTCGGTTTTCCGAAAGAA
AACCTCCTTGGACAAGAGGAAGAATGGTGATGAAACGAACCACCCATTGA
TTCctcataatgaaattaaaactgaaaatttctttgatattgaACGGAGG
GACAACCCTTCTCCAAGAAAACAACACGATTTAAGTTTACATTCTATTCA
GAAAGAAGCCTTGGAAAAGATTTCAAGTTTGAAACGGTCTTTGGACGAAA
GTTTACAGAATGAAATTGTATCGTTGGGAAACGGTAACGCAAAGccaaat
aaaattatgaaaagtaATACGGAAACTTCGTGA Coding sequence (CDS) from alignment at sc0000015_pilon:767050..769032+ >XLOC_039201 ID=XLOC_039201|Name=XLOC_039201|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3804bp|location=Sequence derived from alignment at sc0000015_pilon:767050..769032+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACAAACTCTAGTTGTGTCACTAAATCAGGCTGCTTCGAATCAACACGA
GACTACTAAATCAACCGATCAGGCTCCTTTGATTCAACACGTGCCTGCTT
CGATTGACCACGTAACTgtcaaatcaaccaatcaaaaccCTTATGTTCAA
CACGTGACTGCTAAATCAACCAATCAGGCTCTACCGATTCAACACGTGAC
TGTTCAACAAACTCTAGTTGTGTCACTAAATCAGGCTGCTTCGAATCAAC
ACGAGACTACTAAATCAACCGATCAGGCTCCTTTGATTCAACACGTGCCT
GCTTCGATTGACCACGTAACTgtcaaatcaaccaatcaaaaccCTTATGT
TCAACACGTGACTGCTAAATCAACCAATCAGGCTCTACCGATTCAACACG
TGACTGTTCACATGACTGCTAAATCGACCAATCATGCTCCTTTAATTAAA
CACGTGACTGCTCAACTAACCAATCAGACTTCATCGATTGAACAAGTGAC
TTCTAAATCAACCAATCAGGCTCTACCGATTCAAAACTTGGCTGCTACAA
CAGTAAAGCAGTACCCTTCGATCCGGCCCGTGATAATATCAACCAATCGA
GATACCTCTAAGGAAGCTACTAAAAAACCTCAATGTTCCTCCATACGCTC
TTCAACTCTCACACGTACCGCAGACAAAATAGCCAGTAAAAGAAAAGAAG
TCACTTATTCTATAGCAAAACCAACAACTGAAAAGCCCTCCTCAACATCA
GTAGATTCTCCTGAATTCATGAGCATCGACCTTCCCAAATTACCGACGTA
TGTTCTACACCCATCCTCTGATGAAATGGCCCCGACTGCGAAACCTGCCA
AGCAGCACATGACTGCTAAATCGACCAATCATGCTCCTTTAATTAAACAC
GTGACTGCTCAACTAACCAATCAGACTTCATCGATTGAACAAGTGACTTC
TAAATCAACCAATCAGGCTCTACCGATTCAAAACTTGGCTGCTACAACAG
TAAAGCAGTACCCTTCGATCCGGCCCGTGATAATATCAACCAATCGAGAT
ACCTCTAAGGAAGCTACTAAAAAACCTCAATGTTCCTCCATACGCTCTTC
AACTCTCACACGTACCGCAGACAAAATAGCCAGTAAAAGAAAAGAAGTCA
CTTATTCTATAGCAAAACCAACAACTGAAAAGCCCTCCTCAACATCAGTA
GATTCTCCTGAATTCATGAGCATCGACCTTCCCAAATTACCGACGTATGT
TCTACACCCATCCTCTGATGAAATGGCCCCGACTGCGAAACCTGCCAAGC
AGatatttccttcaaaaatttcatccaatcagatcgcttCGTCCATGGAT
ACATCCAATCAGAACACTTCTTCCTCGAAAGCAAACAATCCGATTACTCC
AATCACGCCCACCAAGTCTGTTTCTTCTGTGAGACCGTCCAATAAGATGA
AAGCAGTTACTTCAAACGGCCCGCATCGGCCGATCGATATTTCAGCCATA
TCAGCTATTCCCGGTGTTCCGATAAAAGCACCGATATATCTTATACCGGT
CACGTCTGCTTCGGTGCCACAAAATAATACTGCCACATCTTTTAATAAAA
AGCTTCAAAACATTGTCGAATGCTTTAAcgagaaaatcaaaaacaagacA
ATCTTGCCTAGTAATGGGTCTACCAATATAGATGACGCGACTTTGAAGAA
TAATACCGATAACGGAGAGCTCCAAAAGCTCTCAAAAACACCCTCTGTAT
CATTAGAAAACAATGTTGTAAAAGAACATACTAAGCCAACCAACCCAGGG
CCAACTTATCCAACGCCAGGTGTCAAGTTACAGCAGTCAAAAGACACTAT
ATATCGTCTTTTACGAAAACAATACGGAGATGCTATCGATTTACGAGAAT
TAAACGAATGCCACTACGActcgaaaacaatcgaaaaaattacaaaaaat
cttcttgaacgtgacaaaatcgcaaacccaaaaacccccgaaacTGCATC
TCAACATCAAACAACTCCTGTCCTACCCTCGAATTATACCATCGATGTAT
CAGGCCGTAAACCAAACAAAGCTCCAATCCCTTACCGTACTACAACTTCT
AAGATAACTTCGCCCCCTGCTTTTCCTTCTCCTCCCTCAAGATTGAGAAG
GTTGGCTCCTAAGCCATCAAGATATATTCAAATGGAAGCTGCAAACATAA
AGAAAACACCAAGAAACACACCCAGAACGAGGTCCAATCTAAATTCGCAG
ATTTCGGTTTTCCGAAAGAAAACCTCCTTGGACAAGAGGAAGAATGGTGA
TGAAACGAACCACCCATTGATTCctcataatgaaattaaaactgaaaatt
tctttgatattgaACGGAGGGACAACCCTTCTCCAAGAAAACAACACGAT
TTAAGTTTACATTCTATTCAGAAAGAAGCCTTGGAAAAGATTTCAAGTTT
GAAACGGTCTTTGGACGAAAGTTTACAGAATGAAATTGTATCGTTGGGAA
ACGGTAACGCAAAGccaaataaaattatgaaaagtaATACGGAAACTTCG
TGAatatttccttcaaaaatttcatccaatcagatcgcttCGTCCATGGA
TACATCCAATCAGAACACTTCTTCCTCGAAAGCAAACAATCCGATTACTC
CAATCACGCCCACCAAGTCTGTTTCTTCTGTGAGACCGTCCAATAAGATG
AAAGCAGTTACTTCAAACGGCCCGCATCGGCCGATCGATATTTCAGCCAT
ATCAGCTATTCCCGGTGTTCCGATAAAAGCACCGATATATCTTATACCGG
TCACGTCTGCTTCGGTGCCACAAAATAATACTGCCACATCTTTTAATAAA
AAGCTTCAAAACATTGTCGAATGCTTTAAcgagaaaatcaaaaacaagac
AATCTTGCCTAGTAATGGGTCTACCAATATAGATGACGCGACTTTGAAGA
ATAATACCGATAACGGAGAGCTCCAAAAGCTCTCAAAAACACCCTCTGTA
TCATTAGAAAACAATGTTGTAAAAGAACATACTAAGCCAACCAACCCAGG
GCCAACTTATCCAACGCCAGGTGTCAAGTTACAGCAGTCAAAAGACACTA
TATATCGTCTTTTACGAAAACAATACGGAGATGCTATCGATTTACGAGAA
TTAAACGAATGCCACTACGActcgaaaacaatcgaaaaaattacaaaaaa
tcttcttgaacgtgacaaaatcgcaaacccaaaaacccccgaaacTGCAT
CTCAACATCAAACAACTCCTGTCCTACCCTCGAATTATACCATCGATGTA
TCAGGCCGTAAACCAAACAAAGCTCCAATCCCTTACCGTACTACAACTTC
TAAGATAACTTCGCCCCCTGCTTTTCCTTCTCCTCCCTCAAGATTGAGAA
GGTTGGCTCCTAAGCCATCAAGATATATTCAAATGGAAGCTGCAAACATA
AAGAAAACACCAAGAAACACACCCAGAACGAGGTCCAATCTAAATTCGCA
GATTTCGGTTTTCCGAAAGAAAACCTCCTTGGACAAGAGGAAGAATGGTG
ATGAAACGAACCACCCATTGATTCctcataatgaaattaaaactgaaaat
ttctttgatattgaACGGAGGGACAACCCTTCTCCAAGAAAACAACACGA
TTTAAGTTTACATTCTATTCAGAAAGAAGCCTTGGAAAAGATTTCAAGTT
TGAAACGGTCTTTGGACGAAAGTTTACAGAATGAAATTGTATCGTTGGGA
AACGGTAACGCAAAGccaaataaaattatgaaaagtaATACGGAAACTTC
GTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000015_pilon | genome | sc0000015_pilon:767050..769032 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1405-2655:733 |
| Aaloc | 1366-1404:664 |
| Aaloc | 1228-1359:532 |
| Aaloc | 1120-1221:430 |
| Aaloc | 943-1116:256 |
| Aaloc | 739-942:1 |
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